AMCG00021912


Basic Information

Item Value
gene id AMCG00021912
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38395806 ~ 38397674 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021912
ATGATGGAGTGCCAGGAATCCTCCACAGATGGAAACAAGATGAACAGGAATGACACTGATGAAGACAAGTCTCTCTACCATGCTTGCAACATCTGTGGCAAAAGCTTTCCTTTCCAGAGCTCTCTGTCACAGCATATGAGGAAGCACACAGGCGAGAAGCCCTACAAATGCCCTTACTGCGACCACAGAGCATCTCAGAAGGGGAATCTTAAAATTCACATACGTACTCACAAGATGGGAACCCTGAGTCTCGGTCATGATGGGGAGGAACTGGGAGAGGGTCAACTGGGAGAGATGGGCGTTTCTGAAGGGCTGGATGGATGTACGAGTCCAACAGAAAGCACATCAGCTTGTAACAACATCGTAAATGGCACTGCCAAGGATGAAAATGGCAAAATCTTGTTGAGGAGTATCAAGAAAGAGAAGATTGTGGGCACCACCAGTGAAACAGGCAAGGCTTCCTCCTCCTTCCAGTGCTCGTTCTGCAAGAAGAAGCTCAGCAACAAGGACGAACTTGAACAGCACATCCAGGTCTTTCACAAGCCCTATCGGTGTAGGCTGTGCAGCTTTGTGGCTCTGAGGGAGGACCAACTCTTGAGCCACATCGAAAAGCTGCACATCACTGTAGAAGCACCTGTCAGAGAGCTAGTTGAAAATGAACCTGTGAAAGGAGAGTCGGGTACTGTGGAAGGGGACTTCCCTTGCGAGGTGTGTAGCCAGGTTTTCAGCCAAGCATGGTTTCTGAAAGCCCATATGAAGAAGCATATTGGCACCTTTGACCACGGCTGTCACATCTGTGGCCGGCGCTTCAAAGAGTCCTGGTTCCTCAAGAATCACATGAAATCCCATGGACCCAAAACAGGCAGCAAGCACAAGCTAAAGAGTGACTCGGAGCCTGTTACCACCATTAATGATATTGTGCAGGATGAAATGGCGATGATGAACTACCGGCCCTCGTCCCGCCAGAGCCGGAGGTCCTCCCAGAACAAGAACACAGAGTGCTTTGAGTGTGGAAAGGTGTTTCGCACTTACCACCAGATGGTGCTGCACTCGCGGGTGCATCGCAAGGAGACCAGAAGCAGCAGCGACAGCGGCAGGGCATCACGGGGAGAGAGATGCGGCTCAGTCAGTGAGGGGGAGTCAGGCTCAGTCAGCCAGCCCAGCACCCCAGGCTCAGCCTCCATCGCTGAGGATTCACCTGCTTCAGTCGTAGGAGAAGACGGAGCAGGGGATATCTCAGAAGATGTACTGCAGCTGCTGTCTTCAGGTATGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021912 True 1275 mRNA 0.52 2 38395806 38397674

Neighbor

gene id symbol gene type direction distance location
AMCG00021910 NA coding upstream 253647 38137122 ~ 38142159 (+)
AMCG00021911 NA coding upstream 274234 38120324 ~ 38121572 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding upstream 1893978 36465786 ~ 36501828 (+)
AMCG00021893 NA coding upstream 2382151 35984055 ~ 36013655 (+)
AMCG00021894 NA coding upstream 2508553 35864749 ~ 35887253 (+)
AMCG00021914 NA coding downstream 458152 38855826 ~ 38865619 (+)
AMCG00021915 NA coding downstream 961044 39358718 ~ 39369622 (+)
AMCG00021927 NA coding downstream 1062585 39460259 ~ 39461475 (+)
G89607 NA non-coding upstream 12851 38382692 ~ 38382955 (+)
G89597 znf236 non-coding upstream 145566 38248914 ~ 38250240 (+)
G89579 NA non-coding upstream 234172 38158553 ~ 38161634 (+)
G89583 NA non-coding upstream 240674 38154835 ~ 38155132 (+)
G89571 NA non-coding upstream 336272 38017304 ~ 38059534 (+)
G89608 NA non-coding downstream 21247 38418921 ~ 38419128 (+)
G89606 NA non-coding downstream 26736 38424410 ~ 38425293 (+)
G89619 NA non-coding downstream 30749 38428423 ~ 38429446 (+)
G89621 NA non-coding downstream 35594 38433268 ~ 38433484 (+)
G89626 NA non-coding downstream 127751 38525425 ~ 38525678 (+)
G89578 NA other upstream 244757 38121257 ~ 38151049 (+)
AMCG00021900 NA other upstream 1736562 36650232 ~ 36659244 (+)
G89299 NA other upstream 2428422 35964571 ~ 35967384 (+)
G89142 NA other upstream 3132269 35211133 ~ 35263537 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 3318716 34926553 ~ 35077090 (+)
G89632 NA other downstream 420198 38817872 ~ 38822685 (+)
G89728 NA other downstream 1002850 39400524 ~ 39408261 (+)

Expression


Co-expression Network