G85009


Basic Information

Item Value
gene id G85009
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 13836587 ~ 13837073 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU106057
CAGCACTAGCAGAGCACAGCAGAGACACCAACAGCACAATCACCAGCGTCAGGATCTTCACATTCATTTCTGCACTCCCCTCTGGCACTCCGTTAGTCAGTAGCTAATATAGtggtgtgtgtatgagagagagagagagagagagagcgagagagagcgagcgagggagagagaaagggagagggagagggagtgttTGCTCCTGAGGGGAGACTGTgcgtgtatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctttctgtttgtgtataagcgtgtgtgtatctgtatctatatatacataatatatttatatatctgtatgCAAGTGTGACAGCGCCTCTCCGAGACTGAAGGCACGTCTTTATCTGAGCTCTCCCAAGGAGGTGTGTTTCTCTCGGAGAAGTCAGCCGGTGCCAAGTTCAGCAGAGCTGTGAATGTGCTGAGAGGCAGCCTGTAGCAGGTTTTTGTATCTGAGCTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106057 True 487 lncRNA 0.49 1 13836587 13837073

Neighbor

gene id symbol gene type direction distance location
AMCG00021288 NA coding downstream 49330 13775039 ~ 13787257 (-)
AMCG00021285 NA coding downstream 65176 13755695 ~ 13771411 (-)
AMCG00021287 LOC106611794 coding downstream 111939 13717973 ~ 13724648 (-)
AMCG00021291 NA coding downstream 122593 13705861 ~ 13713994 (-)
AMCG00021286 LOC107378166 coding downstream 145415 13680903 ~ 13691172 (-)
AMCG00021284 NA coding upstream 44067 13881140 ~ 13896275 (-)
AMCG00021290 NA coding upstream 59820 13896893 ~ 13924592 (-)
AMCG00021301 NA coding upstream 93763 13930836 ~ 13938158 (-)
AMCG00021299 mcts1 coding upstream 116978 13954051 ~ 13964211 (-)
AMCG00021300 NA coding upstream 163523 14000596 ~ 14013160 (-)
G85003 NA non-coding downstream 81118 13751206 ~ 13755469 (-)
G84822 NA non-coding downstream 1173268 12663009 ~ 12663319 (-)
G84812 pcdh19 non-coding downstream 1333085 12500240 ~ 12503502 (-)
G84785 NA non-coding downstream 1633760 12198777 ~ 12202827 (-)
G84780 aifm1 non-coding downstream 1693224 12141960 ~ 12143363 (-)
G85012 NA non-coding upstream 21231 13858304 ~ 13862544 (-)
G85044 NA non-coding upstream 92769 13929842 ~ 13930281 (-)
G85058 NA non-coding upstream 128863 13965936 ~ 13966910 (-)
G85059 NA non-coding upstream 131062 13968135 ~ 13968382 (-)
G85089 NA non-coding upstream 192617 14029690 ~ 14034000 (-)
G84952 NA other downstream 208840 13627335 ~ 13627747 (-)
AMCG00021259 diaph2 other downstream 1035001 12719864 ~ 12801586 (-)
G84814 NA other downstream 1308893 12527093 ~ 12527694 (-)
AMCG00021249 NA other downstream 1735733 12093477 ~ 12100854 (-)
AMCG00021153 NA other downstream 6714096 7115420 ~ 7122491 (-)
G85037 LOC100846954 other upstream 32866 13869939 ~ 13917868 (-)
AMCG00021302 NA other upstream 111234 13948307 ~ 13951044 (-)
G85115 NA other upstream 212901 14049974 ~ 14051897 (-)
AMCG00021304 NA other upstream 220845 14057918 ~ 14071325 (-)
AMCG00021387 NA other upstream 2397244 16234317 ~ 16242655 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location