G84814


Basic Information

Item Value
gene id G84814
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 12527093 ~ 12527694 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105805
attatgaccactgacaggtgaagtgaataacactgataatctcattatcatggcacctgtcagtgggtgggatatattaggcagcaagtgaacattttgtcctcaaagttgatgcgatagaagcaggaaaaatgggcaagcttaaggatctgagcgactttgacaagggccaaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaaccggcgacagggtcatgggcggccaaggctcattgatgcacgtggggagcgaaggctggcccgtgtggtccgatccaacagacgagctactgtagctcaaattgctgaaaaagtgaatgttggttctgatagaaaggtgtcagagcacacagtgcatcgcagtttgttgcctatggggctgcgtagtcgcagaccagtcagggtgcccatgctgacccctgtccactgccgaaagcgcctacaatgggcacatgagcatcagaactggaccacggagcaatggaagaaggtggcctggtctgatgaatca

Function

GO:

id name namespace
GO:0008213 protein alkylation biological_process
GO:0043414 macromolecule methylation biological_process
GO:0006479 protein methylation biological_process
GO:0016569 covalent chromatin modification biological_process
GO:0016570 histone modification biological_process
GO:0016571 histone methylation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105805 True 602 TUCP 0.51 1 12527093 12527694

Neighbor

gene id symbol gene type direction distance location
AMCG00021257 NA coding downstream 302785 12207338 ~ 12224308 (-)
AMCG00021252 NA coding downstream 396156 12127083 ~ 12130937 (-)
AMCG00021253 rab33a,LOC106611995,LOC107733314,LOC107666192,LOC107730569 coding downstream 400248 12122220 ~ 12126845 (-)
AMCG00021251 enox2 coding downstream 595296 11884997 ~ 11931797 (-)
AMCG00021250 NA coding downstream 655582 11847323 ~ 11871511 (-)
AMCG00021260 diaph2 coding upstream 382873 12910567 ~ 12916125 (-)
AMCG00021258 diaph2,LOC107724831 coding upstream 516767 13044461 ~ 13090655 (-)
AMCG00021261 diaph2 coding upstream 658751 13186445 ~ 13192008 (-)
AMCG00021268 LOC100304549,LOC100219516,LOC106514001,LOC103353280 coding upstream 879668 13407362 ~ 13410923 (-)
AMCG00021274 LOC106604457,LOC108231309,LOC102198838,LOC103366979 coding upstream 911048 13438742 ~ 13441143 (-)
G84812 pcdh19 non-coding downstream 23591 12500240 ~ 12503502 (-)
G84785 NA non-coding downstream 324266 12198777 ~ 12202827 (-)
G84780 aifm1 non-coding downstream 383730 12141960 ~ 12143363 (-)
G84778 NA non-coding downstream 393936 12131302 ~ 12133157 (-)
G84760 NA non-coding downstream 425728 12101146 ~ 12101365 (-)
G84822 NA non-coding upstream 135315 12663009 ~ 12663319 (-)
G85003 NA non-coding upstream 1223512 13751206 ~ 13755469 (-)
G85009 NA non-coding upstream 1308893 13836587 ~ 13837073 (-)
G85012 NA non-coding upstream 1330610 13858304 ~ 13862544 (-)
G85044 NA non-coding upstream 1402148 13929842 ~ 13930281 (-)
AMCG00021249 NA other downstream 426239 12093477 ~ 12100854 (-)
AMCG00021153 NA other downstream 5404602 7115420 ~ 7122491 (-)
G83864 NA other downstream 5980516 6544492 ~ 6546577 (-)
G83761 NA other downstream 7775858 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 9808174 2677585 ~ 2718919 (-)
AMCG00021259 diaph2 other upstream 192170 12719864 ~ 12801586 (-)
G84952 NA other upstream 1099641 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 1342245 13869939 ~ 13917868 (-)
AMCG00021302 NA other upstream 1420613 13948307 ~ 13951044 (-)
G85115 NA other upstream 1522280 14049974 ~ 14051897 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G7600 LOC104957016,LOC106903860,LOC103469346,LOC102220538 non-coding NC_053112.1 CM020909.1 25757405 ~ 25758265 (-)