AMCG00021257


Basic Information

Item Value
gene id AMCG00021257
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 12207338 ~ 12224308 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021257
atgttcttGCAGGTGTATGACATGCAGTACAAAGTGATGCTGGATGGAGTGGAGACTGAAAGTTTGATGGAGATTGACCCTGGGCACCGCATAGAGATCTTCAGGACCGGAAATGGCACTGAGGAGGTGCTGGAGATTCACGACTTCAAAAATGGAATGACAGGGATCCGCTTTGCCAAACACCAGAGGTGTTACATCAGGACCCTGGCTAAGGAGCTTCCCAAGATTTCAGAGGAGCAGAGTGAAGACCCAGACGTGGTGGATGAGGATGGAGTAGACACGCAGTTTGAAGACTCGCAGGTTTGGGTTCCTGTGGAGGAGCCCATTGAGAACCGCGTCTTCCTGCTCAACTCCAAAATCTTTGAAATGTGCGAACACCTGCCCATACACTGGATGCATCCCTCATCTCTGAAAGACGCAGAGTTCCATGACATTGAGGATGTGGACGAAGTACAGGAGTCCACCCAAAtcagggtcaaaggtcaacGGCAGACCAGAGACATCACAGACCACCTACCTGTCAATGACTATAGAGAGAATGGAATTGAGCTTGACAACAGACTGGACGAACGGGGGATTTGCTGCCAATACTGTCGCCGTGGTTACCGCTTCTGCCAGCGCTACCTCGAGCCACTGCGCGGGTACATGCCCTACCCATACTACTACCAGGGAGGCCGAGTCATTTGCAGGACCATAATGCCCTGCAACTGGTGGATCGCTCGCATGCTGGGACGGGTCTAAACAAGCACcctcctctctccatctcatcCACATCTCAGATCGGACTGGTCCGGTCTGGTCTTGTTTTGGACTGGAGTACATGGGGCCAAACCTTTACGAAACCCAGATTtactgttattctgtctctaaTTTCAGGGTGATTTCTAATGGGATGTTGGATAATCAGGGGGCTAAATAATGAGATGGATTCCTTAGCACTGTTTACCAATCTTAATTATAGTGTTACCTAAACAATGATATACCTGTGTTTGtggggtttttttttctttctttctttacagctaaattcatttttaagttaCAGAAACTaggaatttaaattaatccGTTTAAATTCCTGTCCTCACATAGTGTTTCTATATTAAGAGTATGATTTTCTTTGCACAAAGTGTGGTGTATCTTGGACCTTGATAGTAAGGACATgtcatgtatacatttttacactCAATTGATTTATCGCTGCTTTTGTATCTCTCTCCACTGTggaattttcattttgtattcataacGTCCCTTGGAATTGGCTTGTTTGTATGATTCAGCTGTTTTTGTCTGTTAAACCCCACTACACagtatcagttttgttttacgTTTGATATGTTCTGTGCCGGTTTGTGAGGCTGCAGTCTTTGCATTGGTTGGGTAACAAGGAAGctatttactttcattttccTTCGGGTTTTACTGCAGTGAAATTCAGAGCCGTTTTTTATGTTATCTACTTTCATATAATTATTCACTAAGTAGCCATCTTGcatatattaacattattaactTGCATGCTTagtatgaaaattattttaaggaTCTCAAATACCCCCTTAAGATATAGTTAGTCTAGAAGAAGCTGGACTGACACGCTTCCCCAATCCCACCCTATGTCACATCTATTTTGAGGGCTACTCAACAGTTTTCTTATCCCTCCCTGTCAATTCTTTTCGAACACGAGGAGGGCAGGGGGACAACCTCAGTAAAAATGTCCAAAAAAGGGATAAATTGTACCATTTTATGGCACATTTAATGTGAGACATTAGCATGCTTTAATAAATTACTGGTTTAATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021257 True 1804 mRNA 0.43 5 12207338 12224308

Neighbor

gene id symbol gene type direction distance location
AMCG00021252 NA coding downstream 76401 12127083 ~ 12130937 (-)
AMCG00021253 rab33a,LOC106611995,LOC107733314,LOC107666192,LOC107730569 coding downstream 80493 12122220 ~ 12126845 (-)
AMCG00021251 enox2 coding downstream 275541 11884997 ~ 11931797 (-)
AMCG00021250 NA coding downstream 335827 11847323 ~ 11871511 (-)
AMCG00021246 med12,LOC106611503 coding downstream 363920 11807293 ~ 11843418 (-)
AMCG00021260 diaph2 coding upstream 686259 12910567 ~ 12916125 (-)
AMCG00021258 diaph2,LOC107724831 coding upstream 820153 13044461 ~ 13090655 (-)
AMCG00021261 diaph2 coding upstream 962137 13186445 ~ 13192008 (-)
AMCG00021268 LOC100304549,LOC100219516,LOC106514001,LOC103353280 coding upstream 1183054 13407362 ~ 13410923 (-)
AMCG00021274 LOC106604457,LOC108231309,LOC102198838,LOC103366979 coding upstream 1214434 13438742 ~ 13441143 (-)
G84785 NA non-coding downstream 4511 12198777 ~ 12202827 (-)
G84780 aifm1 non-coding downstream 63975 12141960 ~ 12143363 (-)
G84778 NA non-coding downstream 74181 12131302 ~ 12133157 (-)
G84760 NA non-coding downstream 105973 12101146 ~ 12101365 (-)
G84692 NA non-coding downstream 503326 11703779 ~ 11704012 (-)
G84812 pcdh19 non-coding upstream 275932 12500240 ~ 12503502 (-)
G84822 NA non-coding upstream 438701 12663009 ~ 12663319 (-)
G85003 NA non-coding upstream 1526898 13751206 ~ 13755469 (-)
G85009 NA non-coding upstream 1612279 13836587 ~ 13837073 (-)
G85012 NA non-coding upstream 1633996 13858304 ~ 13862544 (-)
AMCG00021249 NA other downstream 106484 12093477 ~ 12100854 (-)
AMCG00021153 NA other downstream 5084847 7115420 ~ 7122491 (-)
G83864 NA other downstream 5660761 6544492 ~ 6546577 (-)
G83761 NA other downstream 7456103 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 9488419 2677585 ~ 2718919 (-)
G84814 NA other upstream 302785 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 495556 12719864 ~ 12801586 (-)
G84952 NA other upstream 1403027 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 1645631 13869939 ~ 13917868 (-)
AMCG00021302 NA other upstream 1723999 13948307 ~ 13951044 (-)

Expression


Co-expression Network