Gene
RNA
| Item | Value |
|---|---|
| gene id | G84780 |
| gene name | aifm1 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 12141960 ~ 12143363 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| aifm1 | Predicted to enable flavin adenine dinucleotide binding activity; oxidoreductase activity; and protein dimerization activity. Predicted to act upstream of or within apoptotic process. Predicted to be located in membrane and mitochondrion. Predicted to be integral component of membrane. Is expressed in several structures, including alar plate midbrain region; digestive system; hatching gland; musculature system; and polster. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease X-linked recessive 4; X-linked deafness 5; and combined oxidative phosphorylation deficiency 6. Orthologous to human AIFM1 (apoptosis inducing factor mitochondria associated 1). |
| description |
|---|
| PREDICTED: apoptosis-inducing factor 1, mitochondrial isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU105763 | True | 1208 | lncRNA | 0.41 | 2 | 12141960 | 12143363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021252 | NA | coding | downstream | 11023 | 12127083 ~ 12130937 (-) |
| AMCG00021253 | rab33a,LOC106611995,LOC107733314,LOC107666192,LOC107730569 | coding | downstream | 15115 | 12122220 ~ 12126845 (-) |
| AMCG00021251 | enox2 | coding | downstream | 210163 | 11884997 ~ 11931797 (-) |
| AMCG00021250 | NA | coding | downstream | 270449 | 11847323 ~ 11871511 (-) |
| AMCG00021246 | med12,LOC106611503 | coding | downstream | 298542 | 11807293 ~ 11843418 (-) |
| AMCG00021257 | NA | coding | upstream | 63975 | 12207338 ~ 12224308 (-) |
| AMCG00021260 | diaph2 | coding | upstream | 767204 | 12910567 ~ 12916125 (-) |
| AMCG00021258 | diaph2,LOC107724831 | coding | upstream | 901098 | 13044461 ~ 13090655 (-) |
| AMCG00021261 | diaph2 | coding | upstream | 1043082 | 13186445 ~ 13192008 (-) |
| AMCG00021268 | LOC100304549,LOC100219516,LOC106514001,LOC103353280 | coding | upstream | 1263999 | 13407362 ~ 13410923 (-) |
| G84778 | NA | non-coding | downstream | 8803 | 12131302 ~ 12133157 (-) |
| G84760 | NA | non-coding | downstream | 40595 | 12101146 ~ 12101365 (-) |
| G84692 | NA | non-coding | downstream | 437948 | 11703779 ~ 11704012 (-) |
| G84682 | NA | non-coding | downstream | 696812 | 11444831 ~ 11445148 (-) |
| G84667 | NA | non-coding | downstream | 990522 | 11150986 ~ 11151438 (-) |
| G84785 | NA | non-coding | upstream | 55414 | 12198777 ~ 12202827 (-) |
| G84812 | pcdh19 | non-coding | upstream | 356877 | 12500240 ~ 12503502 (-) |
| G84822 | NA | non-coding | upstream | 519646 | 12663009 ~ 12663319 (-) |
| G85003 | NA | non-coding | upstream | 1607843 | 13751206 ~ 13755469 (-) |
| G85009 | NA | non-coding | upstream | 1693224 | 13836587 ~ 13837073 (-) |
| AMCG00021249 | NA | other | downstream | 41106 | 12093477 ~ 12100854 (-) |
| AMCG00021153 | NA | other | downstream | 5019469 | 7115420 ~ 7122491 (-) |
| G83864 | NA | other | downstream | 5595383 | 6544492 ~ 6546577 (-) |
| G83761 | NA | other | downstream | 7390725 | 4703255 ~ 4751235 (-) |
| AMCG00021090 | NA | other | downstream | 9423041 | 2677585 ~ 2718919 (-) |
| G84814 | NA | other | upstream | 383730 | 12527093 ~ 12527694 (-) |
| AMCG00021259 | diaph2 | other | upstream | 576501 | 12719864 ~ 12801586 (-) |
| G84952 | NA | other | upstream | 1483972 | 13627335 ~ 13627747 (-) |
| G85037 | LOC100846954 | other | upstream | 1726576 | 13869939 ~ 13917868 (-) |
| AMCG00021302 | NA | other | upstream | 1804944 | 13948307 ~ 13951044 (-) |
