XLOC_006293


Basic Information

Item Value
gene id XLOC_006293
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 51328470 ~ 51332764 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013437
CTTTCTACTTACTTATGGTGGTATATTGTGTATTAATATAGGCTGTGTATTGTGTCCTTGTGTATTTACTGCtgctgatgattttttttttttcaacagatttgtAAACTTTATGTAATATCAGTAGCTGTGTCAAGCTTGGATAAATGTGCCAGCTGCAGTGGGCCCTACAATGCATTCAAGTGGGTTAGGGTGAAATGTAAAATCATTCTCAAATCTTCTGAAAATTACGCAAGAAGAAAAACAAAGACCATGGTCTCCTGATGAAATTGCTGCAGTATTGAGACATTTCCAAAGCCATGTTTCCAAGGGTAAACTTGCCACAAAAATAGAATGCCAACAATGCAAATCCGCAGAGCATCCTATGTTGGCAAATCGCTCCATTCAAAACATCAGGGACTTTGTCAGAAACAGGTTTGATGCTGAAATGGAATCAGGTAGAAGTAGTCTTTTTGATAACACTTGACTTAAAGAATgtgtttataaaactgtaataaaaactatataattgTTACAAATGACAGTTGTAATTTGATGTAATGTGCTTCGTTATGtcaattttaaatgacaacttaacAAACCAATACATCAcacgttttttatttttgtcatgacaacttgacattaccaagacaagaGAAAAGCATTTAATAAATCGGTCAAATATGATTGTCATGAGGGCATTATAATTGTGTAATTTCATAAAATGaacattaatattgtttaaattttaaaacagctTCATTCATATTTTTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013437 True 756 lncRNA 0.33 2 51328470 51332764

Neighbor

gene id symbol gene type direction distance location
XLOC_006292 NA coding upstream 9736 51317224 ~ 51318734 (+)
XLOC_006290 CABZ01078666.1 coding upstream 225611 51102744 ~ 51102859 (+)
XLOC_006287 dntt coding upstream 306599 50778187 ~ 51021871 (+)
XLOC_006289 CABZ01083953.1 coding upstream 327292 51001059 ~ 51001178 (+)
XLOC_006288 CABZ01077016.1 coding upstream 534598 50793756 ~ 50793872 (+)
XLOC_006294 CABZ01094390.1 coding downstream 95634 51428398 ~ 51431317 (+)
XLOC_006295 NA coding downstream 101070 51433834 ~ 51439893 (+)
XLOC_006296 NA coding downstream 112230 51444994 ~ 51462667 (+)
XLOC_006297 nkx6.2 coding downstream 247087 51579851 ~ 51584264 (+)
XLOC_006298 NA coding downstream 285019 51617783 ~ 51625567 (+)
XLOC_006286 dre-mir-202 non-coding upstream 725756 50602639 ~ 50602714 (+)
XLOC_006300 NA non-coding downstream 408790 51741554 ~ 51795401 (+)

Expression


Co-expression Network