XLOC_000633


Basic Information

Item Value
gene id XLOC_000633
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 50528134 ~ 50531694 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003157
GGCCAATCAGGttcaggtttatatatatattccccaTTGACCCAGTAAATGACGGTAAAGTCATTAAAGGAAAACGGTAAAGGGATAAGAGTTAGAAGACTGGTGACACATGCGGGAAATACTTGAAAGCATGTCAGAAGATTGGATGAGAAACcaaagtatgagGACCTTTAAGTACAGCGAGAAGAAATTGAACTGGGCCTCTCAGCGGCCTTCAATCTTTGataatttctgaatatgttgTAAAAATTGGTACTTTTACCACCAGGGACCTGAAAAGCCATCCCAGGCCTGACGACTACAGGTTTGATTGCCCCTGCTCcattattattttgctttcctTGGCCATTGCTGTAATTCTTAGGGAAGTTCCCCATAGGTTTTCCACACACCACCCTCGCCTGAGTGTTTCCACTCATTCCTCCCGTATACGGTTTATTATTGCCTTGAGAATTGGGCAGATTCCTCATTGGTAAATACAGCCTCACAGGCGTACCGTAGTACATCCAACACAACTGCTTTTTGGGTGGTATTTTAGAGGTTGGGGCTGGCATTTGTGGTACTTGATTGCCTCTGATTGCTTCAGAAGGAGGAGTTGGGAAAAGACCGGCGGTTTCATGCTCCTCACACCCAACACCTCGCTCCTGATCCTGCGGAGTCACTTCATAACCTTCCAGAATCACAACATCTTCACCCGAACGCTTCTGAAGATCTGAATCCAGGAAGACAAACCTTGAGGACATGCCTGATGTAGGacttttataaaattttttatgtattataatgaGAGTATTTAGCATGACATTTTagaatgtacttactgtgttgaCCTTGACGGCACTTAATATTTCTGcctgaaaaaacaaaaattaatacaaaagactttagaatataatattgcAAAGTACTTTCAAAAAATTCAGGGTTCAACAAAATTAATTTATGTCATCCcaatacaaatcgattaagttaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003157 True 973 lncRNA 0.41 3 50528134 50531694

Neighbor

gene id symbol gene type direction distance location
XLOC_000632 NA coding upstream 135345 50389319 ~ 50392789 (+)
XLOC_000631 aimp1a coding upstream 208480 50293938 ~ 50319654 (+)
XLOC_000630 npnta coding upstream 340128 50085440 ~ 50188006 (+)
XLOC_000629 gstcd coding upstream 462531 49951707 ~ 50065603 (+)
XLOC_000628 NA coding upstream 605261 49920790 ~ 49922873 (+)
XLOC_000634 pkd2 coding downstream 7145 50538839 ~ 50557030 (+)
XLOC_000635 si:ch73-190m4.1 coding downstream 82174 50613868 ~ 50637221 (+)
XLOC_000636 herc3 coding downstream 107722 50639416 ~ 50691538 (+)
XLOC_000637 NA coding downstream 201462 50733156 ~ 50808448 (+)
XLOC_000638 BX855617.1 coding downstream 322670 50854364 ~ 50854478 (+)
XLOC_000626 NA non-coding upstream 753194 49699382 ~ 49774940 (+)
XLOC_000623 BX321880.1 non-coding upstream 937311 49590701 ~ 49590823 (+)
XLOC_000616 NA non-coding upstream 1275480 49244352 ~ 49252654 (+)
XLOC_000640 NA non-coding downstream 411898 50943592 ~ 50953558 (+)
XLOC_000643 NA non-coding downstream 484164 51015858 ~ 51018551 (+)
XLOC_000651 BX547996.1 non-coding downstream 933774 51465468 ~ 51465582 (+)

Expression


Co-expression Network