G1809 (LOC107723197,LOC107692608,LOC107564078)


Basic Information

Item Value
gene id G1809
gene name LOC107723197,LOC107692608,LOC107564078
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7743495 ~ 7797446 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU2621
ACCCACCGTCGGGGTCTTGGTTCAGGGATGAAGGCACTTCTCCGCTGTCCAGGATGCTGAAGCCCTCGTCATTCTCGATGCCCGCGATTTCACTCTCCTGCTGGGCCAGAAACGCTGCCGCCGGGTCCTCGTCTGCCCCCACGCCGTTCCCTGCGCTTCCTTGAGGGGCACTGAGCATATCAAAATCGTCCATGGCTCGCTAAATATCTCTGGACTGAGAACAACCGAAAACACAAATCACCCTACTGTCTTCCTCGTCGAAGGCTCCAATGTCAGAGGGGTGATGGGTGAGTGAGGGTATGTTTTGGGAGTTTCAGGCAGATTGAAATCCAGCTTGGTGGAATTGGGAGATGTTGGGCTCAAAGGTGGCTGGGATTTCTGGCCTGGAGGAGGAATGTTGATGGCAAGCGTTTTGAGGATGTGGGTTGTTTGCTGGGTAGGTGTTGGCTGTTTTGCTTTAGGAGACTGCTTGCGTGGAGCTAGTGCAGCTATAGTGCTTGGTTTTGGGGCAGCATCCAAGACAGGATACACTAGACGGTCAACTATGTTATTGCTGCCTGGCTGTT

Function

NR:

description
PREDICTED: tudor domain-containing protein 7A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2621 True 566 lncRNA 0.46 2 7743495 7797446

Neighbor

gene id symbol gene type direction distance location
b4galt1 LOC107692709,LOC107565367,LOC107758898,LOC107665944,LOC107557953,LOC108277608 coding downstream 13755 7722102 ~ 7729740 (-)
LOC122352459 mtp,LOC107557955,LOC107723195,LOC107564103,LOC107692610,LOC107665974 coding downstream 26170 7706885 ~ 7717325 (-)
pla2g12a LOC107692613,LOC107564125,LOC107665940,LOC107758864,LOC107557937 coding downstream 56640 7684099 ~ 7686855 (-)
grk4 grk4,LOC107665967,LOC107723186,LOC107692618,LOC107758889 coding downstream 94901 7624106 ~ 7648594 (-)
iqce iqce,LOC107723199,LOC107692619,LOC107665963,LOC107758887 coding downstream 127195 7607639 ~ 7616300 (-)
sclt1 sclt1,LOC107692600,LOC107665924,LOC107683335 coding upstream 8246 7805692 ~ 7818399 (-)
pcdh18a LOC107751534,LOC107692598,LOC107564003,LOC107746447,LOC107557554 coding upstream 374891 8172337 ~ 8179576 (-)
elf2b elf2b,LOC107692595,LOC107702304,LOC107742505,LOC107714223,LOC107562959 coding upstream 675373 8472819 ~ 8490055 (-)
camk2d2 camk2d2,LOC107714220,LOC107563926,LOC107742503,LOC107702309,LOC107562980,LOC103354871,LOC108246882 coding upstream 768707 8566153 ~ 8598509 (-)
pde5aa LOC107692592,LOC107563895 coding upstream 811642 8609088 ~ 8622357 (-)
G1781 NA non-coding downstream 82963 7656078 ~ 7660532 (-)
G1663 NA non-coding downstream 427177 7315910 ~ 7316318 (-)
G1660 knstrn,LOC107723170,LOC107564216,LOC107758858,LOC107586895 non-coding downstream 430597 7312252 ~ 7312898 (-)
LOC122341717 NA non-coding downstream 445350 7297494 ~ 7298145 (-)
G1632 NA non-coding downstream 591015 7150285 ~ 7152480 (-)
G1845 pcdh10a,LOC107751533,LOC107665923,LOC107557555 non-coding upstream 155767 7953213 ~ 7984303 (-)
LOC122341751 NA non-coding upstream 277729 8075175 ~ 8077387 (-)
G1868 NA non-coding upstream 341037 8138483 ~ 8167387 (-)
LOC122351284 NA non-coding upstream 649102 8446548 ~ 8448624 (-)
G2010 NA non-coding upstream 834018 8631464 ~ 8634397 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other downstream 447666 7204004 ~ 7295829 (-)
G1642 NA other downstream 573473 7125642 ~ 7170022 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other downstream 609213 7071589 ~ 7134282 (-)
LOC122342514 NA other downstream 1198937 6533501 ~ 6544558 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other downstream 1275241 6456044 ~ 6468254 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other upstream 694698 8492144 ~ 8500212 (-)
G1926 NA other upstream 758594 8556040 ~ 8607795 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other upstream 981766 8779212 ~ 8798355 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 2559735 10357181 ~ 10401686 (-)
LOC122347930 dnah6,LOC106610484 other upstream 2937524 10734970 ~ 10799609 (-)

Expression


Co-expression Network