G3993


Basic Information

Item Value
gene id G3993
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 16828097 ~ 16848411 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU5734
CTCGTAAATATGCAGTGCAGGGAGATCCTCGCAGTTTATTTAGGCTTAGCAGGGGAACATGAGGATGCCCATAAGCTGATGACTCATGGTAGACTCCACACAGCCTCATCACGCTGTATCCAGTGATTTCCCTCAGGAAAGCCCAGCAGGTTACTAATGCTGATGAGACCTCGGTTCAGATGCATCATGGGGCCTGTATTATTTATCATGCACGAGGAAATTCTATATGTCCCTCATTTTCACTTGCagatttccttttttccccaaaaatgcTAGTTAAAATAAATCgtggtgtattttttattttattttatcatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5734 True 319 lncRNA 0.42 2 16828097 16848411

Neighbor

gene id symbol gene type direction distance location
nt5c2b nt5c2b,LOC107568788,LOC107738462,LOC107602759,LOC107704322,LOC107699105,LOC108435980 coding downstream 12221 16795040 ~ 16815876 (-)
dpcd dpcd,LOC107704327,LOC107708668,LOC107699082,LOC107602740,LOC107568794,LOC107738465 coding downstream 92039 16733140 ~ 16736058 (-)
lbx1b LOC107708670,LOC107704311,LOC107602738,LOC107699080,LOC107568786,LOC107684813 coding downstream 136125 16690224 ~ 16691972 (-)
cenpk cenpk,LOC107704319,LOC107738476 coding downstream 140385 16683451 ~ 16687712 (-)
rims1b LOC107704328,LOC108441990 coding downstream 148887 16622817 ~ 16679210 (-)
pnpla4 pnpla4,LOC107708662,LOC107691610 coding upstream 60959 16909370 ~ 16918050 (-)
LOC122341421 zdhhc5a,LOC107746524,LOC107674225,LOC107556824,LOC107730508,LOC107551501,LOC107664565,LOC108412478 coding upstream 535145 17383556 ~ 17412721 (-)
LOC122348766 dok7,LOC107749932,LOC107679881,LOC107674231,LOC107714234,LOC107552150 coding upstream 574151 17422562 ~ 17432850 (-)
frem3 frem3,LOC107550584,LOC107654895,LOC107734585,LOC107725184 coding upstream 763098 17611509 ~ 17636279 (-)
si:dkey-27h10.2 NA coding upstream 792489 17640900 ~ 17654486 (-)
G3990 NA non-coding downstream 65 16827670 ~ 16828032 (-)
G3989 NA non-coding downstream 492 16827357 ~ 16827605 (-)
G3971 NA non-coding downstream 65017 16745185 ~ 16763080 (-)
G3976 NA non-coding downstream 66958 16760176 ~ 16761139 (-)
G3975 NA non-coding downstream 69184 16756834 ~ 16758913 (-)
G4001 NA non-coding upstream 21560 16869971 ~ 16870988 (-)
G4035 NA non-coding upstream 130680 16979091 ~ 16983845 (-)
G4049 NA non-coding upstream 182338 17030749 ~ 17030981 (-)
G4051 NA non-coding upstream 183336 17031747 ~ 17032006 (-)
G4072 LOC107661227 non-coding upstream 437237 17285648 ~ 17286007 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 379578 16447088 ~ 16448519 (-)
igf2bp2b igf2bp2b,LOC107704342,LOC107573191,LOC107699092,LOC107556709 other downstream 469072 16334202 ~ 16359025 (-)
march4l zgc:153256,march9,LOC107719730,LOC107654275,LOC107556712,LOC107707834,LOC107699089 other downstream 629834 16159692 ~ 16198263 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other downstream 754177 16069177 ~ 16073920 (-)
G3571 NA other downstream 1597211 15230539 ~ 15230886 (-)
LOC122330431 lsm6 other upstream 586306 17434717 ~ 17436707 (-)
smad1 smad1,LOC107684445,LOC107734580 other upstream 897426 17745837 ~ 17764732 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other upstream 963048 17811459 ~ 17880417 (-)
cdk2ap2 cdk2ap2,LOC107684972 other upstream 2687553 19535964 ~ 19539146 (-)
si:dkey-9i23.16 NA other upstream 3288624 20137035 ~ 20140579 (-)

Expression


Co-expression Network