cenpk (cenpk,LOC107704319,LOC107738476)


Basic Information

Item Value
gene id cenpk
gene name cenpk,LOC107704319,LOC107738476
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 16683451 ~ 16687712 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237895.1
ACTTGAACGTCCGCGGCGTGTGACGCCGGCGTGACGTCATGACGTCGTCGCTGGCGGTATTTTTGTTTGGAGTGTGGCGTTCAGCGTCAAACTCGGGATTAGCGTTCACTTAAAAGAAAAGCTACTGATGACCCCAGCACCAtcaaaaaagagaaatggaGCAGGACACTCGGTCACCTCAGTCTTCGGAGGCTGCTGCCAAAGCAGTGTTGCTGGAGGAGTGCGAGGAGCAGTTCGGACTGCTACAGAAGCTTCAAAATGAGATCATTCTGGCAGATACAGAGGCTAATGATGATCAGTCAAATGAGGCAGTGAATCGCCTGATTGCAATCACATCTGAGTTAGAACAATGGCAAGAAATGGAACCAAAATtgCTGACAACAAGTCCTGAAGTCTTATTAGCAGTTGGTAAAGAAGAATTGCAAAGACTCAACAGTCAACTGAAAATGGTCCTGTCATGCTCACAAGCAAAGCTGGATGCCCagaaaaagattttgaaaagGGAGCAGACATGGCAAGCAGAGAAGAAAGAAGCACTGAATGCAGTGTGTGAGAAAATCACCAGATTGCAATGTGACAATGAGAAATCAGAGCACAGcGTTTTGCAagatatgaaaagaaaaattagcAGTCTGAAGGACTATCACAGCAGTCTCATGGAAATGCTGAGTGACATGTTAGCTGAGCACTTCCCGCTTCCCGATCCCCAGGGAAAcggcacaaagaaaaaaagaGCTGCCGCATATGATGCAGAGATTAACCTGATTTCCCTGAGTGAGATTATCGAGAAATTgaccaataaaacattagaaacTCCTCACGACCCTTATGTGATAACGGATGACACTTTCTGGCCACCGTACACAGAAATGCTTCTTCGCAACGGTGTGGCAACACGGCATCCAGAAGATTGCAATAAAATCCGtcttgaacatttttttaatctaaccAGTACTTATCTGAATCTAATCTATGTCTACAGTTAAATGTCAATGCCTGCTCTTTTTTCAAATTGATATGAATTCTCATGGTAGTATTTCATTGCGACTGGATGTATTTTTGAGTTATCCACAACTTGGAACGCACGTCTGGCTTCGAATGTGTTGGTGgttatttttacttcattcaTGTATGTACAAgacaaaattagattttttttaaaataatgaattaaagtAACTAAACATA

Function

symbol description
cenpk Predicted to be involved in mitotic sister chromatid segregation. Predicted to act upstream of or within kinetochore assembly. Predicted to be located in chromosome, centromeric region and nucleus. Orthologous to human CENPK (centromere protein K).

NR:

description
PREDICTED: centromere protein K-like isoform X1

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG:

id description
K11503 CENPK; centromere protein K

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237895.1 True 1188 mRNA 0.42 10 16683451 16687712

Neighbor

gene id symbol gene type direction distance location
rims1b LOC107704328,LOC108441990 coding downstream 4241 16622817 ~ 16679210 (-)
kcnq5b kcnq5b,LOC107708682,LOC107699099,LOC107556702 coding downstream 63906 16541382 ~ 16619545 (-)
ppp1r9alb LOC107708684,LOC107699098,LOC107738468,LOC107602753,LOC107556703 coding downstream 151680 16514042 ~ 16531771 (-)
dlx2b dlx2b,LOC107699078,LOC107556695,LOC107704335,LOC107602735,LOC107719742,LOC107708688 coding downstream 203235 16478542 ~ 16480216 (-)
dis3 dis3,LOC107699072 coding downstream 219311 16453763 ~ 16464140 (-)
lbx1b LOC107708670,LOC107704311,LOC107602738,LOC107699080,LOC107568786,LOC107684813 coding upstream 2512 16690224 ~ 16691972 (-)
dpcd dpcd,LOC107704327,LOC107708668,LOC107699082,LOC107602740,LOC107568794,LOC107738465 coding upstream 45428 16733140 ~ 16736058 (-)
nt5c2b nt5c2b,LOC107568788,LOC107738462,LOC107602759,LOC107704322,LOC107699105,LOC108435980 coding upstream 107328 16795040 ~ 16815876 (-)
pnpla4 pnpla4,LOC107708662,LOC107691610 coding upstream 221658 16909370 ~ 16918050 (-)
LOC122341421 zdhhc5a,LOC107746524,LOC107674225,LOC107556824,LOC107730508,LOC107551501,LOC107664565,LOC108412478 coding upstream 695844 17383556 ~ 17412721 (-)
G3890 NA non-coding downstream 169859 16511553 ~ 16513592 (-)
G3835 NA non-coding downstream 376175 16306977 ~ 16307276 (-)
G3832 NA non-coding downstream 382778 16300404 ~ 16300673 (-)
G3819 NA non-coding downstream 419093 16264092 ~ 16264358 (-)
G3760 NA non-coding downstream 571903 16111138 ~ 16111548 (-)
G3971 NA non-coding upstream 57473 16745185 ~ 16763080 (-)
G3975 NA non-coding upstream 69122 16756834 ~ 16758913 (-)
G3976 NA non-coding upstream 72464 16760176 ~ 16761139 (-)
G3989 NA non-coding upstream 139645 16827357 ~ 16827605 (-)
G3990 NA non-coding upstream 139958 16827670 ~ 16828032 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 234932 16447088 ~ 16448519 (-)
igf2bp2b igf2bp2b,LOC107704342,LOC107573191,LOC107699092,LOC107556709 other downstream 324426 16334202 ~ 16359025 (-)
march4l zgc:153256,march9,LOC107719730,LOC107654275,LOC107556712,LOC107707834,LOC107699089 other downstream 485188 16159692 ~ 16198263 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other downstream 609531 16069177 ~ 16073920 (-)
G3571 NA other downstream 1452565 15230539 ~ 15230886 (-)
LOC122330431 lsm6 other upstream 747005 17434717 ~ 17436707 (-)
smad1 smad1,LOC107684445,LOC107734580 other upstream 1058125 17745837 ~ 17764732 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other upstream 1123747 17811459 ~ 17880417 (-)
cdk2ap2 cdk2ap2,LOC107684972 other upstream 2848252 19535964 ~ 19539146 (-)
si:dkey-9i23.16 NA other upstream 3449323 20137035 ~ 20140579 (-)

Expression


Co-expression Network