dis3 (dis3,LOC107699072)


Basic Information

Item Value
gene id dis3
gene name dis3,LOC107699072
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 16453763 ~ 16464140 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248161.1
GTTTAGGAGAGTAAGGGACTAGTTAGTTTCTGAACAGAATATACAGTGGCTGCTTGGGTCATCCAGATAGTTTGTGGTTCTGATAAATAAACCCGTGTTTCGTTTCATCTGCTGCGCTTTTCAGGATTCGGAACAGAAGCTCTCCGTCTCCGAATCACTCCGGAATAACATTTAGTTGGCGCGCCGGGGCACACGTGGGTTTACTGTGGCGTGTTTTGGTGGAGCGGCTCCTCAAAACCGCCGTCGGTACTGTTTATTTGGACCATGCTGAAATCCAAGACATTCGTGAAGAAGACCCGCTCTGGTGGAGTGTTGAAAATAGTGCGCGAACATTACCTGAGAGATGACATCTGGTGTGGAAGTGAAGTTTGTAAGGAGTGTAAAGACGAAGCGCCTGTGCTGCAGGACGACGCGTGCATAGAGAGCAACCTGTGCTCGTATCCTCACTATCTGATCCCAGACACCAACGTAGTTTTACATCAGATTGACATCCTTGAGGACCCTCTGATCAGGAACGTCATCATTCTTCAGACCGTTTTACAAGAGGTCAGACACAGGAGCGCTCCAGTCTACAAAAGAATCAAGGATGCCATCCATGAGAAGGAAAAGCACTTCTACACCTTCACTAATGAGCACCACAGGGAGACGTTTATTGAACGAGAGCAAGGGGAAAGTGCTAATGATCGTAATGATCGAGCCATCCGTGTTGCTGCTAAATGGTACACAGATCACCTCAATAAAACATCCAGTGACGGCTCCCTGAAAGTGGTTCTGCTGACTGACGACCGGGCCAATAGAGAGAAGGCAGAGCAGTCTGGTCTGATCGTGTACAGATGCGAGGAGTACATCAAGAGCTTGATTGGTAACCCTGAGCTTGTGGACAGACTTGCACTGCAGTCTGATGATCAAAATGAAATCACTGGCAGCAAGTTGCTGTTTCCAGAACATCTACCCTTATCCAGGATTCAGAGCGGCATTAAGAACGGAGTGTTCCTTCAAGGCACGTTCCATGCCAACAGAGATAACTATCTGGAGGGCACAGTCTTTATAAATAGAGAGGGGGAAGATATCACTGAGGTTCTACTTCAAGGCCTTCAGAATTTAAACCGGGCTGTTCATCAGGACGTAGTGGCTGTTGAACTGTTTCCCAAAGAACGCTGGGTTGCTCCATCATCTGTTGTGCTGCAGGATGATAGCCCAAATGAGGAAGATGCTGAGGAAGATGAGACCGAAAATAAGCTGAAGGGTTCACCGTCAGACTCCAGCGTCCTCAAGCCCACTGGACGAGTGGTGGGCATCATAAAGAGGAACTGGAGGCCTTACTGTGGAATGCTCTCCCAGTCAATGATCAAAGAGGCAACAAGGCACCTTTTCACCCCAGCAGACCGTCGAATCCCACGGATTCGTATAGAGACCAGACAAGCCGCCAATCTGCTTGGACAGAGGATTATGGTTGCTATTGATGGCTGGCCTAAAAATTCCAGATACCCAAACGGTCACTTTGTAAAAAACCTTGGCAGTGCTGGAGATAAAGAGACCGAGACCGAGGTGCTTCTTCTGGAGCATGATGTTCCTCACCAGCCCTTCTCTCAGGCTGTTCTTAGCTTCCTACCCAAGATGCCCTGGAGTATTACAGAAGAGGATTTGAAGGTCAGAGCAGATCTCAGACACCTCTGTGTGTGTAGTGTGGATCCTCCTGGCTGTACGGATATCGATGATGCTCTTCATTGTCGGGAACTGGGGAATGGAAACTTGGAGgTTGGTGTGCATATAGCAGATGTCAGCCATTTTATTCGGCCAGGAAATGCTCTAGATCAAGAGGCTGCGAGCAGAGGCACTACAGTCTACCTTTGTGGAAAGagaATTGACATGGTTCCTGAACTTCTGAGTTCCAACTTGTGTTCTCTGAGATCCAATGTTGAGAGGTTAGCATTCTCTTGTATTTGGGAGATGAACCACAATGCTGAAATCATCAAAACTCACTTCACAAAGAGCGTCATTAACTCCAAGGCCTCCCTTACATACGCCGAAGCTCAGATGAGGATTGATGACACCAACATGAATGATGACATCACAAAGAGCCTGCGGGGCCTTAATAGGCTGGCCAAGATCTTAAAGGGTCGGAGGATTGAAAAAGGAGCACTGACCCTCTCCTCTCCTGAAGTACGTTTCCATATGGACAGTGAGACACATGACCCTATAGATCTGCAGACCAAAGAACtgaaGGAGACAAATTCAATGGTGGAGGAGTTCATGCTGTTGGCCAATATCTCTGTAGCACAGAAGATCTATGACGAGTTCTCAGAATGTGCCCTACTGAGGAAACACCCTGCACCACCTCCATCAAACTATGACATCCTCATTAAGGCTGCAAAATCAAGGgaCCTTAACATCCACACGGATTCAGCCAAAGCTCTGGCTGATTCCTTGAACAATGCTACAGTTGAGAACTTTTCGTACTTCAACACCCTGCTGAGGATTCTGGCCACCCGCTGCATGATGCAGGCCGTGTATTTCTGCTCTGGCATGGACAGTGATTTCCACCACTATGGCCTGGCATCACCCATCTACACACACTTCACATCACCCATCAGAAGATATGCTGATATCATAGTTCACCGTCTGTTAGCAGTGGCTATTAACGCAGACAGTACGTACCCGGATTTGATGGACAAGCATAAGCAGTTATCCTTATGCAACAACCTCAACTACAGACACAAGATGGCCCAGTATGCACAGAGAGCCTCGGTGGCGTTCCACACTCAGCTGTTCTTCAAGAATAAGGGAATCCTAAACGAGGAAGGCTTTATTCTTTTTGTGAGAAAAAATGCCATTATCGTCCTCATTCCTAAGTTTGGGATGGAAGGCGCCGTGTTTTTTGACAACAAGGACAAACCTAGCCCTCCTCTCAAATTTGACTCTGAGGGTCCTACACTTAAAGTGGAAGAACACACTTTCCGCATGTTTGACAAAGTTAAAGTAACAATCAGCCTTGACGCTTCCAACATCCAGCATCAAAGAATCAGAATGGCACTGACTGAACCAGTGATCCCTGGGGTTAGTGTACCTGTACCTGAGTCAGAACCACAGGCCAAGAAACCCAAGCTTGACGACTGAGCACCAAGAACCAACTCTAAAActcataaaagcaaaaaatccaTAAAGCTTTTTGGTTCATCTGCAAGGAGAATGAGTGAATGATCAAGTGGAAAAACTGACATGAGTGTTTTgggtttttcccttttttttttttaatccatgtACACCagttctgtttttgcttttatctaCATTAACAAGTTAAATGTACGGTCTTTTATAGTCTTTGAGACAAACTGTCTGTGGAATTAGTAGACGTTCTGTTTGAGCAGTAGTGCTGTGTCTTAACACAACATATTAAAAAGGACTTTTTTAAAGTACTAAGtttatatgttttgtgtttggcTGTCAGAGATAAAGCCATCTTCTATTATATTTAGGGTTGCCATTAATCTTTGATTAATGAATTCCCATGACTCAAAACCCAACATTTAAGTGAATAGTGAATTTAACATTTGATAGTTTTTAGCCAActgttttccaaaaatgtattttgaatacaACGCACAAAAATCTTTTAAGAGAATCAGAGCTACTGATAATATAACCTTCAAATTAAAGTATTTCTAtactatttatattactattgaAAATATGAGTcagaaaatgctttattttagaaTGAAGCGGAGTAATAAATCCAATACTTCCcataattgaaaataaagatTTTCGTAACCTT

Function

symbol description
dis3 Predicted to enable 3'-5'-exoribonuclease activity and endonuclease activity. Predicted to be involved in rRNA catabolic process. Predicted to be located in nucleus. Predicted to be part of cytoplasmic exosome (RNase complex) and nuclear exosome (RNase complex). Orthologous to human DIS3 (DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease).

NR:

description
PREDICTED: exosome complex exonuclease RRP44

GO: NA

KEGG:

id description
K12585 DIS3, RRP44; exosome complex exonuclease DIS3/RRP44

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248161.1 True 3781 mRNA 0.44 21 16453763 16464140

Neighbor

gene id symbol gene type direction distance location
dachc dachc,dach1,LOC107732708,LOC107602747,LOC107719724,LOC107699095,LOC108435962 coding downstream 17905 16393537 ~ 16435858 (-)
ubac2 ubac2,LOC107704341,LOC107732706,LOC107573193 coding downstream 66656 16371488 ~ 16387107 (-)
c1h3orf70 si:dkey-22o12.2,LOC107588819,LOC107732704,LOC107704345,LOC107699091,LOC107719729,LOC107556711,LOC108435969 coding downstream 132171 16309009 ~ 16321592 (-)
spp2 spp2,LOC107654271,LOC107707843,LOC107588827,LOC107719734,LOC107556720 coding downstream 384468 16066727 ~ 16069295 (-)
snapc3 snapc3 coding downstream 743917 15701109 ~ 15709846 (-)
dlx2b dlx2b,LOC107699078,LOC107556695,LOC107704335,LOC107602735,LOC107719742,LOC107708688 coding upstream 14402 16478542 ~ 16480216 (-)
ppp1r9alb LOC107708684,LOC107699098,LOC107738468,LOC107602753,LOC107556703 coding upstream 49902 16514042 ~ 16531771 (-)
kcnq5b kcnq5b,LOC107708682,LOC107699099,LOC107556702 coding upstream 77242 16541382 ~ 16619545 (-)
rims1b LOC107704328,LOC108441990 coding upstream 158677 16622817 ~ 16679210 (-)
cenpk cenpk,LOC107704319,LOC107738476 coding upstream 219311 16683451 ~ 16687712 (-)
G3835 NA non-coding downstream 146487 16306977 ~ 16307276 (-)
G3832 NA non-coding downstream 153090 16300404 ~ 16300673 (-)
G3819 NA non-coding downstream 189405 16264092 ~ 16264358 (-)
G3760 NA non-coding downstream 342215 16111138 ~ 16111548 (-)
G3758 NA non-coding downstream 345153 16108326 ~ 16108610 (-)
G3890 NA non-coding upstream 47413 16511553 ~ 16513592 (-)
G3971 NA non-coding upstream 281045 16745185 ~ 16763080 (-)
G3975 NA non-coding upstream 292694 16756834 ~ 16758913 (-)
G3976 NA non-coding upstream 296036 16760176 ~ 16761139 (-)
G3989 NA non-coding upstream 363217 16827357 ~ 16827605 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 5244 16447088 ~ 16448519 (-)
igf2bp2b igf2bp2b,LOC107704342,LOC107573191,LOC107699092,LOC107556709 other downstream 94738 16334202 ~ 16359025 (-)
march4l zgc:153256,march9,LOC107719730,LOC107654275,LOC107556712,LOC107707834,LOC107699089 other downstream 255500 16159692 ~ 16198263 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other downstream 379843 16069177 ~ 16073920 (-)
G3571 NA other downstream 1222877 15230539 ~ 15230886 (-)
LOC122330431 lsm6 other upstream 970577 17434717 ~ 17436707 (-)
smad1 smad1,LOC107684445,LOC107734580 other upstream 1281697 17745837 ~ 17764732 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other upstream 1347319 17811459 ~ 17880417 (-)
cdk2ap2 cdk2ap2,LOC107684972 other upstream 3071824 19535964 ~ 19539146 (-)
si:dkey-9i23.16 NA other upstream 3672895 20137035 ~ 20140579 (-)

Expression


Co-expression Network