G76388


Basic Information

Item Value
gene id G76388
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10184094 ~ 10184522 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU113040
GGGGTGGTGGGCTTCTCTGGTTTCCAAACTGAGGCTCACACCGCTGACTCCACATGATCTACCTCACCACAGACTGCCGTCTCCCCCACACCCTCTGTTTATCTCCctctctcatttctctctcttttaatcTATGCGTTTCACTGTCTTTCTGCTGTCTCCCCTTTCCGTGCACTCCCGCCCCCTATATTCAGAcacattctgttttatttcatctttattcAGATGcataggcacacacacacacactgatgattCGCAGCCCCCTGAAAAGTTTGTGGTTGGCTAGGCCAGATAACACTCGCACCCACAGCCACCCAAGGATGAAACGTATCCACGCTACTAACAAACAGTTGGACCCTTCTGTCGACGGACACATCTGGGGCTTGTTGGACACAGATGTTTCTGCAGGCCCACGCCCCATTCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113040 True 429 lncRNA 0.51 1 10184094 10184522

Neighbor

gene id symbol gene type direction distance location
dchs1b LOC107718741,LOC107701146,LOC107555179,LOC108438972,LOC108277286,LOC105907404,LOC107693876,LOC107720538 coding downstream 25201 10066471 ~ 10158893 (-)
arfip2b arfip2b,LOC107718740,LOC107555180,LOC107701145,LOC107693925,LOC107557232 coding downstream 135637 10036639 ~ 10048457 (-)
fhdc3 fhdc3,LOC107693924,LOC107557231,LOC107720631,LOC107718739,LOC107701144,LOC107555182 coding downstream 147901 10028731 ~ 10036193 (-)
trim3b trim3b,LOC107701140,LOC107557229,LOC107720632,LOC107718737 coding downstream 156438 10001337 ~ 10027656 (-)
trpc4a trpc4a,trpc4,LOC107701104,LOC107555142,LOC107693894,LOC107720578 coding downstream 283922 9888356 ~ 9900172 (-)
LOC122353016 slc46a3,LOC107693895,LOC107720589,LOC107701147,LOC107718743 coding upstream 272 10184794 ~ 10191230 (-)
LOC122352632 LOC107720618,LOC107718749,LOC559907 coding upstream 105010 10289532 ~ 10303026 (-)
znhit2 LOC107720610,LOC107548862,LOC107693940,LOC107718755,LOC107701159,LOC107555156 coding upstream 190980 10375502 ~ 10377728 (-)
mrpl49 mrpl49,LOC107720585,LOC107693898,LOC107701163,LOC107718758 coding upstream 193342 10377864 ~ 10379018 (-)
LOC122352676 NA coding upstream 195894 10380416 ~ 10381074 (-)
G76327 NA non-coding downstream 77915 10098265 ~ 10106179 (-)
G76324 NA non-coding downstream 160393 10023495 ~ 10023701 (-)
G76233 NA non-coding downstream 359925 9823035 ~ 9824169 (-)
LOC122352923 NA non-coding downstream 420603 9761809 ~ 9763491 (-)
G76229 NA non-coding downstream 466681 9717033 ~ 9717413 (-)
G76413 NA non-coding upstream 57437 10241959 ~ 10242182 (-)
G76421 NA non-coding upstream 68503 10253025 ~ 10253861 (-)
G76426 NA non-coding upstream 132549 10317071 ~ 10317400 (-)
G76458 NA non-coding upstream 219435 10403957 ~ 10411838 (-)
G76488 NA non-coding upstream 240093 10424615 ~ 10445156 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other downstream 558689 9572372 ~ 9625405 (-)
cd209 NA other downstream 673664 9489330 ~ 9510430 (-)
G76068 NA other downstream 754294 9427962 ~ 9429800 (-)
G75913 LOC107688158,LOC107713356,LOC105014858,LOC103473696,LOC107686448 other downstream 1628006 8543097 ~ 8556088 (-)
smtna smtna,LOC107686451,LOC107569392,LOC107688657,LOC107713360,LOC107744109,LOC107579337 other downstream 1656647 8519666 ~ 8527447 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other upstream 82832 10267354 ~ 10283665 (-)
G76438 NA other upstream 195574 10380096 ~ 10383309 (-)
G76498 NA other upstream 293537 10478059 ~ 10480189 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other upstream 788359 10972881 ~ 10983738 (-)
G76625 NA other upstream 832588 11017110 ~ 11038731 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G425764 NA non-coding CI01000304 null 12302340 ~ 12302726 (+)