LOC122352923


Basic Information

Item Value
gene id LOC122352923
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 9761809 ~ 9763491 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251940.1
tatatatatatatatatatatatatatatatatatatatatatatagtatttttttaagttcatttagAATCAATAGGCAGCAGTTTAGAAGTGCACCAGAAACCCATATTGATTTAGAAAATGAAACACCATTTACGGtgtttacagtaaatacagcaCTCATGACCAGTTCTTTGCCatcaaaggaaaaataaataaaatgttccaTTTGCTAAATAGCACATCACATTTCTATTTTAGGTAGCTGTCAGACCATGAGACACTGAGGGAAAAAGAATATTACCAAAACGAACGAACTAAGGAACAGTTGTCCCACATCAATTTGGGAAATGCATGCATCATAAAAACTTTCTAGCACTCCCAGAGCCCTATCAGTCCTGGTCTGATTCCGTGCGGTGTCTCTGAGAAATGTTATCCACCACCAACTGATCATCAATATTAGCTTTGCCACTAGCAGACACCGACAACAGAGGTTTggaaaagagaagaaatcatGGATGAGTTGCCGAATCAAACTAATGAAACATTCATCAGACTGAGGAGAGGAAGAATCCAATGTGTTGATATAGTAGCTATGATTTGTGCTTTTTTCGGCTTTCTCTGTGTAGCTGTGATCACAGGGTTACCGAGGTGGAAACTCACTGTACGCTCTGAATCAGGGACAGAATACGAAGGACTTTGGACTAAATGTTCTGTTATCCACGATGCCAGTTCATTAACATGCAAAGCCCATTTAGATCCAGCCCCATGGTCAGTCCGTTACTTTGTAACTCTCTCTTTGGTTCTGGCCGCGGTTGCATGGATGGGTTCACTCATGAGCATTCAGTGCACCCGTCCCAGCACTGCCAGGCGCTGCCTGATTGGAGCAGGCTGTTTGCACCTGCTCGCTTCACTCACTACTCTCATCTCTGTGTCCTGGACGGCGCTCGGCATCTTCCATGCTGATCGTGGTCTGAGCTCCGGTCGGTTCCACATGGGGGAGGCTCTGTTTGTAGGCTGGCTGGCCTCGTGTTTGCTATGCACAGCTGGGTTGTTGCAGTGCTGTTCCGGGCCCCTCGTCAGGGCAGGAGAAGAAACGAGCATCGCAGAGTCCTCCAGTCATAGTGACATCAGTTTGGACACACTTTTCAGCTCAGCCAGCCTACACTCTCACGGATATATTAGAGAATTGTAAAAATGGATATGTTGGTAAcaaattgtctttttaaatcacatcaaaataaaaactgaaggGATATTTTGTGCTACAACTGATGATGTGGCATCACGTTAAGGTGTTtaatttagtcaaataaataccactttagttttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251940.1 True 1315 lncRNA 0.42 2 9761809 9763491

Neighbor

gene id symbol gene type direction distance location
grik1a grik1a,grik1,LOC107693913,LOC107718733,LOC107701130,LOC107555187,LOC107557219 coding downstream 94 9717827 ~ 9761715 (-)
cct8 cct8,LOC107693911,LOC107701129 coding downstream 71020 9685436 ~ 9690789 (-)
tmem135 tmem135,LOC107701128,LOC107718730,LOC107720646,LOC107693910 coding downstream 77160 9677270 ~ 9684649 (-)
kpna7 kpna7,LOC107693907,LOC107720648,LOC107556882,LOC108423764,LOC103041448,LOC108277302 coding downstream 129463 9629432 ~ 9632346 (-)
mtnr1bb mtnr1bb,LOC107720651,LOC107693905,LOC103030874,LOC108423763,LOC105890457,LOC108276622,LOC107556861 coding downstream 201571 9542381 ~ 9560238 (-)
tiam1a tiam1a,LOC107693916,LOC107718732,LOC107720640,LOC107557220,LOC107701134,LOC107701133 coding upstream 835 9764326 ~ 9820581 (-)
sod1 sod1,LOC107555186,LOC107557221,LOC107701135 coding upstream 63599 9827090 ~ 9829492 (-)
scaf4a LOC107720638,LOC107557222,LOC107693920 coding upstream 66709 9830200 ~ 9840399 (-)
postna LOC107693921,LOC107701137,LOC107555184,LOC107720541 coding upstream 102129 9865620 ~ 9885047 (-)
trpc4a trpc4a,trpc4,LOC107701104,LOC107555142,LOC107693894,LOC107720578 coding upstream 124865 9888356 ~ 9900172 (-)
G76229 NA non-coding downstream 44396 9717033 ~ 9717413 (-)
G76225 LOC107693912,LOC107720644,LOC107557217,LOC107555188,LOC107718731,LOC107701131 non-coding downstream 51101 9701992 ~ 9710708 (-)
LOC122352922 NA non-coding downstream 64421 9695838 ~ 9697388 (-)
G76213 LOC107557212,LOC107693892,LOC107718792 non-coding downstream 98027 9660691 ~ 9663782 (-)
G76112 NA non-coding downstream 189526 9570431 ~ 9572283 (-)
G76233 NA non-coding upstream 59544 9823035 ~ 9824169 (-)
G76324 NA non-coding upstream 260004 10023495 ~ 10023701 (-)
G76327 NA non-coding upstream 334774 10098265 ~ 10106179 (-)
G76388 NA non-coding upstream 420603 10184094 ~ 10184522 (-)
G76413 NA non-coding upstream 478468 10241959 ~ 10242182 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other downstream 136404 9572372 ~ 9625405 (-)
cd209 NA other downstream 251379 9489330 ~ 9510430 (-)
G76068 NA other downstream 332009 9427962 ~ 9429800 (-)
G75913 LOC107688158,LOC107713356,LOC105014858,LOC103473696,LOC107686448 other downstream 1205721 8543097 ~ 8556088 (-)
smtna smtna,LOC107686451,LOC107569392,LOC107688657,LOC107713360,LOC107744109,LOC107579337 other downstream 1234362 8519666 ~ 8527447 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other upstream 503863 10267354 ~ 10283665 (-)
G76438 NA other upstream 616605 10380096 ~ 10383309 (-)
G76498 NA other upstream 714568 10478059 ~ 10480189 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other upstream 1209390 10972881 ~ 10983738 (-)
G76625 NA other upstream 1253619 11017110 ~ 11038731 (-)

Expression


Co-expression Network