LOC122352676


Basic Information

Item Value
gene id LOC122352676
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10380416 ~ 10381074 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250197.1
AAGCGCTATACTCTTCCtgtgtttggggtcattgtgACGCCAATGCTTCTCAAAGTGTCCGAAATCGTGCATAGCGATGGAGTTGGTGGACAATTTACTGCATGGACGCATATAACGTCGCCAACTTCTTTGGAAATGTAACAGGGTCGTTTGTTTTAAAGACCAGAGACCAGCACAAAAGAGTTTGGATATTGGGCTCGTCAACCTGAACATGTCAAACCCACCGCCGGTACCGGAGAAGTCGAGTCCGCAGGCCACTATTCTGCTCGGGGACTGCTGGAGCTGTCGGATGCTGTTGGGCAGTGGGCTGTTGACTTATGGGGGATATGTGGGCATGCAGGCGCGGAGGGCCATGAGTCCAGGCGGACCCCCGTCTTTGGGCATAGCGGTTCAGTTTATGTTTGCTGCAGGTTTGGCTGCCTGGGGCGTAGTGGTGATGGTTAAACCAGCGGAGAAGTACACAAGAGTAGCATAGATTGCATTTGGACTTTTGAGTGAATAACCAGAGCCACACTGGCAGAGttatgaaattcaaataatgatGAGAATGTGCTTCAGTgatatttcaataaatgtttttatttgcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250197.1 True 588 mRNA 0.49 2 10380416 10381074

Neighbor

gene id symbol gene type direction distance location
mrpl49 mrpl49,LOC107720585,LOC107693898,LOC107701163,LOC107718758 coding downstream 1398 10377864 ~ 10379018 (-)
znhit2 LOC107720610,LOC107548862,LOC107693940,LOC107718755,LOC107701159,LOC107555156 coding downstream 2688 10375502 ~ 10377728 (-)
LOC122352632 LOC107720618,LOC107718749,LOC559907 coding downstream 77390 10289532 ~ 10303026 (-)
LOC122353016 slc46a3,LOC107693895,LOC107720589,LOC107701147,LOC107718743 coding downstream 189186 10184794 ~ 10191230 (-)
dchs1b LOC107718741,LOC107701146,LOC107555179,LOC108438972,LOC108277286,LOC105907404,LOC107693876,LOC107720538 coding downstream 221523 10066471 ~ 10158893 (-)
LOC122352947 NA coding upstream 1602 10382676 ~ 10383332 (-)
LOC122352948 LOC107693944,LOC107548866,LOC107720609 coding upstream 2458 10383532 ~ 10384648 (-)
cnih2 cnih2,LOC100706298,LOC107718764,LOC107091387 coding upstream 9042 10390116 ~ 10398224 (-)
auts2a auts2,LOC107693947 coding upstream 100579 10481653 ~ 10762897 (-)
ints2 ints2,LOC107744627,LOC107699256,LOC107747027,LOC107693886 coding upstream 492738 10873812 ~ 10891764 (-)
G76426 NA non-coding downstream 63016 10317071 ~ 10317400 (-)
G76421 NA non-coding downstream 126555 10253025 ~ 10253861 (-)
G76413 NA non-coding downstream 138234 10241959 ~ 10242182 (-)
G76388 NA non-coding downstream 195894 10184094 ~ 10184522 (-)
G76327 NA non-coding downstream 274237 10098265 ~ 10106179 (-)
G76458 NA non-coding upstream 22883 10403957 ~ 10411838 (-)
G76488 NA non-coding upstream 43541 10424615 ~ 10445156 (-)
G76489 NA non-coding upstream 55118 10436192 ~ 10460399 (-)
G76493 NA non-coding upstream 74517 10455591 ~ 10456512 (-)
G76618 NA non-coding upstream 490732 10871806 ~ 10872087 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other downstream 96751 10267354 ~ 10283665 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other downstream 755011 9572372 ~ 9625405 (-)
cd209 NA other downstream 869986 9489330 ~ 9510430 (-)
G76068 NA other downstream 950616 9427962 ~ 9429800 (-)
G75913 LOC107688158,LOC107713356,LOC105014858,LOC103473696,LOC107686448 other downstream 1824328 8543097 ~ 8556088 (-)
G76498 NA other upstream 96985 10478059 ~ 10480189 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other upstream 591807 10972881 ~ 10983738 (-)
G76625 NA other upstream 636036 11017110 ~ 11038731 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other upstream 795495 11176569 ~ 11207252 (-)
ccdc83 NA other upstream 1124236 11505310 ~ 11584960 (-)

Expression


Co-expression Network