ints2 (ints2,LOC107744627,LOC107699256,LOC107747027,LOC107693886)


Basic Information

Item Value
gene id ints2
gene name ints2,LOC107744627,LOC107699256,LOC107747027,LOC107693886
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10873812 ~ 10891764 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251065.1
ttttgagaCGCAGTCAAGAGTGCAGCATGAACACCGAAGGCAGATGAGCGCTTGTGCTAAAACAATTCACTATTCTACTTTTTAGCTTGCTGTCAGTAAGCAGTTTGGAGctctagCAGCTAGCCTATTAGCTTACCGGCGAACTCCACTGTCTTAACCGACGGCGTTCAACTTCCTGTAGGCGTAAGCATCACGAAAGACCGCGGTCTTGCGGGCCTCATCGGGGCTTGTGTTTCTGCTGCAGTCATCGGCTCTGGTAAACTTAAGAATGGCAGACAGTGCCAGTCTTCAGTTTGTGAGCCCATATGCATTTGAAGCCATGCAGAAGGTAGATGTGGCCAGACTAGCAGCTTTAAGTGACCCAGAGCTGCGGCTCCTGCTGCCCTGTCTGGTGAGGATGGCTCTGTGTGCCCCTGCGGATCAGAGTAATGCCTGGGCACAGGACAAGAAGCTCATCCTGCGACTTCTGTCAGGGGTGGAGGCTGTAAACTCCATCGTTGCACTGCTGTCTGTGGATTTCCATGCTCTGGAGCAGGACGCTAGAAAAGAGCAGCAGCTGAGGCATAAGGCTGGTGGCTCTAATGGCGAGAGCATCCTGGTCTCTCAGTTGCAGCATGGTTTGACTCTGGAATTTGAACACAGTGATCCTCTCAGGAGACTCAGACTGGCCCTTAGTGAGCTGCTGGCCATTATGAACAAGGTGGCTGACTCTAATGGAGAGTTTTTCCTCAAGTCCTCGGAGTTGTTTGAGAGTCCCGTCTACTTGGAGGAAGTGGCCGATGTTCTTTGCATTCTACAAGCAGAGCTGCCTTCTTTGATGCCCATCATTGAGGTTGCCGAGGCCCTGCTTCATGTGCGGAACGGAGAGTGGTTCCTGTGCCTGCTGGTGGCAAATGTCCCAGACAGCTTCAGTGAGGTGTGCAGGGGATTGATAAAGAACGGAGAACGGCAGGATGAAGAGAGCGTGGGTGGGCGACGCAGGACAGAAGCTCTCCGGCAGCTGTGTCAGATGAACCCTTCTCAGGCTCTGAACATCAGGGCCATGGTGGTGGAGGAGTGTCATCTTCCAGGTTTGGGCGTTGCTCTAACACTGGACTATAAACCAGACATGGCAGATGAGGCTGTCAGTCCTCTTGTGTCTTATGTCAGCGGCCTACTTCTGGGCACCAATGGAAAAGTGCGTACCTGGTTCAGTATGTTCATTCGCAACGGTCAGCAGaggaaaagagagagcagCTCAGTGCTGTGGCAGATGCGGAGGCAGCTGCTGTTGGAGCTGGTGGCCATCTTACCCCGTTCCCGCAGTACCCATGTTCCCAATGACAGCGACATGGACTCAGAGAGCAGCTCGGGGTACTCTGGCCTGAGGGAGGAGCATGTAGTGAAGGCCAGCGCGCTGCTGCGACTCTATTGCGCACTTATGGGGATTGCCGGTCTTAGGCCCACAGATGAAGAGGCGGAGCAACTGTTGCAGTTGATGACCAGTCGTCCACCAGCCACACCTGCAGGAGTACGCTTTGTCTCCCTGTCCTTCTGCAAACTGCTGGCGTTCCCTACCCTTGTCAGTACTCCAGAACAGGAGCAACTGATGGTAATGTGGCTCAGCTGGATGATAAAAGAGGAGGAGTATTTTGAGAGTGCCGCCGGTGTCTCTGCCTCTTTTGGAGAGATGCTATTACTGGTTGCAATGTATTTCCATAGCAACCAGCTCAGCGCTATCATCGAATTGGTTTGCTCCACTCTTGGGATGAAGATCGCCATCAAACCCAGCTCACTGAGCAAAATGAAGACCATTTTCACTCAGGAAATCTTCACCGAACAGGTGGTCACAGCACATGCCGTGCGAGTGGCCGTTACTAATAACCTCAGTGCCAACATCACAGGATTCCTTCCCATCCACTGCATATACCAGCTCCTGAGGAGCAGAGCCTTCACCAAACACAAAGTGTCCATAAAGGACTGGATCTTCAGACAGCTGTGCGAGACGACTACCCCACTCCACACTCAGCTGCTTCCATTAATTGATGTTTACATTAACTCCATCCTGACCCCTGCTTCCAAGACCAACCCTGAGGCTACCAACCAGCCAATCACGGAGCAGGAGATCCTTAATGTTTTCCAGGGCTTGGCAGGGGGAGATGGAGGGAAAGTCCGTTCTCAGTACACCATCACCACCCAGTTGCTCATTCTCTATTACATCCTGTCGTACGAGGAAGCTCTGCTCGCGAATACAAAGACATTGGCACTTATGCAGAAGAAACCAAAATCATACTCTCCTGCCCTCATGGACCAGATTCCCATTAAACACCTCATCCGCCAGGCCCAAGGACTGCAGCAGGAGCTGGGAGgTTTACATTCTGCTCTTCTGCGTCTTCTGGCCACAAACTATCCTCATCTTTGTATGGTGGAGGACTGGATCGGTGAAGAGGAAGTGACCGGTACTCTGCCTTTACTGAGGAAGATGTTGCTGACATCCTCATCCTGCAAATACTCACAGACACAGCTACGAGAGGctTTCCAGAATGTTCTCTCTGGCGGGCCCAGACTGCTGCGTATCCTAGAGCACCTGACGCTGCTCTCTGCAGGAGATCTGATACCATATGCAGAGGCTTTGACTGCCAGCATGGGGCTGCTCTTAGAGGACGGCGTCTCTCGCAGGATCCTGCAGACTGTTAACAAACTCTGGATGGTACTTAATACAGTCATGCCACGCAAGCTGTGGGTGATGACGGTAAACGCTCTGCAGCCTTCAGTAAAGCTCCTGCGGCAGCAGAAATACACTCAGAATGATCTGATGGTGGATCCTCTCATCGTCTTGCGCTGCGACTCTAGAGTCTTCAGGTGTCCTCCACTAATGGACATCACTCTTCATATGCTGAATGGGTACCTGTTGGCATCTAAAGCCTACTTGAACGCCCACCTGAAAGAGACGGCTGAATTTGAGCGACAAGCTCAGACTGTATCAAACCTTGGGCTGAGCGGCCAAACTGATACTCCTGAGGTCACCAGAGAAGAGCTGAAGAACGCTCTGCTGGCTGCTCAGGACAGTGCAGCGGTACAGATCTTGCTGGAGGTGTGTTTGCCGTCCCCTCAGGAGGAGCTGCAGCtgggaggaggtggaggagcaGACAGCCTGTTGAGGAGCGTTCAGTCCGCTCCAGGTATTCCCACGCGGAAGCAGGTGGGCGACGCTGGGGCCGGGCGGGGGGCCCAGGGGGAGCGCGAGGCAGAGGGCGGGCTGCTCAGTGACCTGAGGGAGGTGCAGTGTCTCATCTGCTGCCTGCTGCACCAAATGTTCATCGCAGACCCCAACATTGCCAAACTAGTACACTTTCAGGGTTATCCGCAGGCTTTGCTCCCTCTGACGGTGGCAGGAATACCTTCCATGCACATCTGTCTAGACTTTATCCCAGAACTCCTCGCTCAGCCGCAACTGGAGAAACAAATCTTCGCCATACAGCTGTTGTCCCATCTGTGCACCCAGTACGCCCTGCCCAAATCCCTCAGTGTGGCACGTCTTGCCATTAGTGTGATGGGCACCCTCCTCACAGTGCTGACTCGTGCCAAGCGCTTTGCATTTTTCATGCCGACGCTGCCATGCCTGGTTTCATTCTGCAAGGCTTTCCCTCCACTCTTTGATGATGTCATGTCCCTCCTGGTTCAGGTAGGACAGGTGTCTGCAGCTGATGTCACCACCAAGGCCAGGGATATTGACCCTCTCATTGCCAGGCTCCAGTATCTGAGACAGAAGCCACAGGAAATACTGCTGTCGGAATCCAAGTACTCTCTACACAAGAGGTCTGCAGAGGAACTGGGCGGAGCCGATCCAGATGTTCAGCTGTGCTATCAGATAGAGGCCACCTTCATGGATATCATCAGCTCCAGTACACAGGCACTGTGACAACACTAACAGACACATACAAATCTTAATGGGACTTGAATAGATCGGAATGAGTTGTTTGTCCCATTTAAAGGTTAAGCCTCATGATACAGAAATCTGCGTATATGTAAAGGGGTATAACGATAGATGACTTCCAGCTGTTGGAATTGTGCTGGGACCGTTTCAGTTTCAAGTCGGTCCACTCAAAACACTGAACATGAATTCTCTCCTCCATTTTTGGCATGCCACATGTCATGAAAACATCTGGAATGAAGGATACAAAAGTAATTCTAATTCAATATAGTTTTACGTAAACTGTACTTATATGGTGTATATGGGCAGTCAAATCACGGGGTACCAATTTTCCGAACAAAAGACGAGATGTActgaaagataaaaatataaattgcaatttCATACTCTGTTGCCAGCCGAAACCACCATCTATGTTTGCCTCAAAACAACGTTTGACTTTCAAGAAAACATCATCTTTTAAGTAAATTGGACTTTTATTTTCTGGCCTGTCCTGAAGGATTGGAGTATATCTGGTCACAAAGCAGCTTGCTGTAGATTTTCTAAATAGCGTGTTAGCTTGCTAGTTAAGTGTGTATTTGAGTGAGAGATGAAATGTGCGTCCAGGGCACTTAACAGTGATATTATTGGTCTGTTTTCTAGACCCACCATTTAAGAGAGTATTTTCTTGGCTCAAATTCACCTTTTCTTGAAGCTGATGTCTGAATTTTGTTTGTTACATTGGTTTTGTATACATGTCAAGCTTACGTTTTGaacatttgtattaaaacatgtttttggaagctc
>XM_043251066.1
ttttgagaCGCAGTCAAGAGTGCAGCATGAACACCGAAGGCAGATGAGCGCTTGTGCTAAAACAATTCACTATTCTACTTTTTAGCTTGCTctctagCAGCTAGCCTATTAGCTTACCGGCGAACTCCACTGTCTTAACCGACGGCGTTCAACTTCCTGTAGGCGTAAGCATCACGAAAGACCGCGGTCTTGCGGGCCTCATCGGGGCTTGTGTTTCTGCTGCAGTCATCGGCTCTGGTAAACTTAAGAATGGCAGACAGTGCCAGTCTTCAGTTTGTGAGCCCATATGCATTTGAAGCCATGCAGAAGGTAGATGTGGCCAGACTAGCAGCTTTAAGTGACCCAGAGCTGCGGCTCCTGCTGCCCTGTCTGGTGAGGATGGCTCTGTGTGCCCCTGCGGATCAGAGTAATGCCTGGGCACAGGACAAGAAGCTCATCCTGCGACTTCTGTCAGGGGTGGAGGCTGTAAACTCCATCGTTGCACTGCTGTCTGTGGATTTCCATGCTCTGGAGCAGGACGCTAGAAAAGAGCAGCAGCTGAGGCATAAGGCTGGTGGCTCTAATGGCGAGAGCATCCTGGTCTCTCAGTTGCAGCATGGTTTGACTCTGGAATTTGAACACAGTGATCCTCTCAGGAGACTCAGACTGGCCCTTAGTGAGCTGCTGGCCATTATGAACAAGGTGGCTGACTCTAATGGAGAGTTTTTCCTCAAGTCCTCGGAGTTGTTTGAGAGTCCCGTCTACTTGGAGGAAGTGGCCGATGTTCTTTGCATTCTACAAGCAGAGCTGCCTTCTTTGATGCCCATCATTGAGGTTGCCGAGGCCCTGCTTCATGTGCGGAACGGAGAGTGGTTCCTGTGCCTGCTGGTGGCAAATGTCCCAGACAGCTTCAGTGAGGTGTGCAGGGGATTGATAAAGAACGGAGAACGGCAGGATGAAGAGAGCGTGGGTGGGCGACGCAGGACAGAAGCTCTCCGGCAGCTGTGTCAGATGAACCCTTCTCAGGCTCTGAACATCAGGGCCATGGTGGTGGAGGAGTGTCATCTTCCAGGTTTGGGCGTTGCTCTAACACTGGACTATAAACCAGACATGGCAGATGAGGCTGTCAGTCCTCTTGTGTCTTATGTCAGCGGCCTACTTCTGGGCACCAATGGAAAAGTGCGTACCTGGTTCAGTATGTTCATTCGCAACGGTCAGCAGaggaaaagagagagcagCTCAGTGCTGTGGCAGATGCGGAGGCAGCTGCTGTTGGAGCTGGTGGCCATCTTACCCCGTTCCCGCAGTACCCATGTTCCCAATGACAGCGACATGGACTCAGAGAGCAGCTCGGGGTACTCTGGCCTGAGGGAGGAGCATGTAGTGAAGGCCAGCGCGCTGCTGCGACTCTATTGCGCACTTATGGGGATTGCCGGTCTTAGGCCCACAGATGAAGAGGCGGAGCAACTGTTGCAGTTGATGACCAGTCGTCCACCAGCCACACCTGCAGGAGTACGCTTTGTCTCCCTGTCCTTCTGCAAACTGCTGGCGTTCCCTACCCTTGTCAGTACTCCAGAACAGGAGCAACTGATGGTAATGTGGCTCAGCTGGATGATAAAAGAGGAGGAGTATTTTGAGAGTGCCGCCGGTGTCTCTGCCTCTTTTGGAGAGATGCTATTACTGGTTGCAATGTATTTCCATAGCAACCAGCTCAGCGCTATCATCGAATTGGTTTGCTCCACTCTTGGGATGAAGATCGCCATCAAACCCAGCTCACTGAGCAAAATGAAGACCATTTTCACTCAGGAAATCTTCACCGAACAGGTGGTCACAGCACATGCCGTGCGAGTGGCCGTTACTAATAACCTCAGTGCCAACATCACAGGATTCCTTCCCATCCACTGCATATACCAGCTCCTGAGGAGCAGAGCCTTCACCAAACACAAAGTGTCCATAAAGGACTGGATCTTCAGACAGCTGTGCGAGACGACTACCCCACTCCACACTCAGCTGCTTCCATTAATTGATGTTTACATTAACTCCATCCTGACCCCTGCTTCCAAGACCAACCCTGAGGCTACCAACCAGCCAATCACGGAGCAGGAGATCCTTAATGTTTTCCAGGGCTTGGCAGGGGGAGATGGAGGGAAAGTCCGTTCTCAGTACACCATCACCACCCAGTTGCTCATTCTCTATTACATCCTGTCGTACGAGGAAGCTCTGCTCGCGAATACAAAGACATTGGCACTTATGCAGAAGAAACCAAAATCATACTCTCCTGCCCTCATGGACCAGATTCCCATTAAACACCTCATCCGCCAGGCCCAAGGACTGCAGCAGGAGCTGGGAGgTTTACATTCTGCTCTTCTGCGTCTTCTGGCCACAAACTATCCTCATCTTTGTATGGTGGAGGACTGGATCGGTGAAGAGGAAGTGACCGGTACTCTGCCTTTACTGAGGAAGATGTTGCTGACATCCTCATCCTGCAAATACTCACAGACACAGCTACGAGAGGctTTCCAGAATGTTCTCTCTGGCGGGCCCAGACTGCTGCGTATCCTAGAGCACCTGACGCTGCTCTCTGCAGGAGATCTGATACCATATGCAGAGGCTTTGACTGCCAGCATGGGGCTGCTCTTAGAGGACGGCGTCTCTCGCAGGATCCTGCAGACTGTTAACAAACTCTGGATGGTACTTAATACAGTCATGCCACGCAAGCTGTGGGTGATGACGGTAAACGCTCTGCAGCCTTCAGTAAAGCTCCTGCGGCAGCAGAAATACACTCAGAATGATCTGATGGTGGATCCTCTCATCGTCTTGCGCTGCGACTCTAGAGTCTTCAGGTGTCCTCCACTAATGGACATCACTCTTCATATGCTGAATGGGTACCTGTTGGCATCTAAAGCCTACTTGAACGCCCACCTGAAAGAGACGGCTGAATTTGAGCGACAAGCTCAGACTGTATCAAACCTTGGGCTGAGCGGCCAAACTGATACTCCTGAGGTCACCAGAGAAGAGCTGAAGAACGCTCTGCTGGCTGCTCAGGACAGTGCAGCGGTACAGATCTTGCTGGAGGTGTGTTTGCCGTCCCCTCAGGAGGAGCTGCAGCtgggaggaggtggaggagcaGACAGCCTGTTGAGGAGCGTTCAGTCCGCTCCAGGTATTCCCACGCGGAAGCAGGTGGGCGACGCTGGGGCCGGGCGGGGGGCCCAGGGGGAGCGCGAGGCAGAGGGCGGGCTGCTCAGTGACCTGAGGGAGGTGCAGTGTCTCATCTGCTGCCTGCTGCACCAAATGTTCATCGCAGACCCCAACATTGCCAAACTAGTACACTTTCAGGGTTATCCGCAGGCTTTGCTCCCTCTGACGGTGGCAGGAATACCTTCCATGCACATCTGTCTAGACTTTATCCCAGAACTCCTCGCTCAGCCGCAACTGGAGAAACAAATCTTCGCCATACAGCTGTTGTCCCATCTGTGCACCCAGTACGCCCTGCCCAAATCCCTCAGTGTGGCACGTCTTGCCATTAGTGTGATGGGCACCCTCCTCACAGTGCTGACTCGTGCCAAGCGCTTTGCATTTTTCATGCCGACGCTGCCATGCCTGGTTTCATTCTGCAAGGCTTTCCCTCCACTCTTTGATGATGTCATGTCCCTCCTGGTTCAGGTAGGACAGGTGTCTGCAGCTGATGTCACCACCAAGGCCAGGGATATTGACCCTCTCATTGCCAGGCTCCAGTATCTGAGACAGAAGCCACAGGAAATACTGCTGTCGGAATCCAAGTACTCTCTACACAAGAGGTCTGCAGAGGAACTGGGCGGAGCCGATCCAGATGTTCAGCTGTGCTATCAGATAGAGGCCACCTTCATGGATATCATCAGCTCCAGTACACAGGCACTGTGACAACACTAACAGACACATACAAATCTTAATGGGACTTGAATAGATCGGAATGAGTTGTTTGTCCCATTTAAAGGTTAAGCCTCATGATACAGAAATCTGCGTATATGTAAAGGGGTATAACGATAGATGACTTCCAGCTGTTGGAATTGTGCTGGGACCGTTTCAGTTTCAAGTCGGTCCACTCAAAACACTGAACATGAATTCTCTCCTCCATTTTTGGCATGCCACATGTCATGAAAACATCTGGAATGAAGGATACAAAAGTAATTCTAATTCAATATAGTTTTACGTAAACTGTACTTATATGGTGTATATGGGCAGTCAAATCACGGGGTACCAATTTTCCGAACAAAAGACGAGATGTActgaaagataaaaatataaattgcaatttCATACTCTGTTGCCAGCCGAAACCACCATCTATGTTTGCCTCAAAACAACGTTTGACTTTCAAGAAAACATCATCTTTTAAGTAAATTGGACTTTTATTTTCTGGCCTGTCCTGAAGGATTGGAGTATATCTGGTCACAAAGCAGCTTGCTGTAGATTTTCTAAATAGCGTGTTAGCTTGCTAGTTAAGTGTGTATTTGAGTGAGAGATGAAATGTGCGTCCAGGGCACTTAACAGTGATATTATTGGTCTGTTTTCTAGACCCACCATTTAAGAGAGTATTTTCTTGGCTCAAATTCACCTTTTCTTGAAGCTGATGTCTGAATTTTGTTTGTTACATTGGTTTTGTATACATGTCAAGCTTACGTTTTGaacatttgtattaaaacatgtttttggaagctc

Function

symbol description
ints2 Predicted to be involved in snRNA 3'-end processing. Predicted to act upstream of or within snRNA processing. Predicted to be located in nucleus. Predicted to be part of integrator complex. Orthologous to human INTS2 (integrator complex subunit 2).

NR:

description
PREDICTED: integrator complex subunit 2 isoform X1

GO: NA

KEGG:

id description
K13139 INTS2; integrator complex subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251065.1 True 4699 mRNA 0.50 26 10873812 10891764
XM_043251066.1 False 4680 mRNA 0.50 26 10873812 10891764

Neighbor

gene id symbol gene type direction distance location
auts2a auts2,LOC107693947 coding downstream 110915 10481653 ~ 10762897 (-)
cnih2 cnih2,LOC100706298,LOC107718764,LOC107091387 coding downstream 475588 10390116 ~ 10398224 (-)
LOC122352948 LOC107693944,LOC107548866,LOC107720609 coding downstream 489164 10383532 ~ 10384648 (-)
LOC122352947 NA coding downstream 490480 10382676 ~ 10383332 (-)
LOC122352676 NA coding downstream 492738 10380416 ~ 10381074 (-)
med13a med13,LOC107693951,LOC107744626,LOC107699258,LOC107747042,LOC107548827 coding upstream 1029 10892793 ~ 10945715 (-)
cltca cltca,cltc,LOC107548879,LOC107744621 coding upstream 154643 11046407 ~ 11079418 (-)
LOC122352515 ddx56,LOC107733287,LOC107751685 coding upstream 189875 11081639 ~ 11138691 (-)
btg3 btg3,LOC107699262,LOC107744619,LOC107747057,LOC107693957,LOC107548882,LOC107578493 coding upstream 253621 11145385 ~ 11149832 (-)
LOC122352533 LOC107747056,LOC107693900,LOC107548843,LOC107548828 coding upstream 259347 11151111 ~ 11158734 (-)
G76618 NA non-coding downstream 1725 10871806 ~ 10872087 (-)
G76489 NA non-coding downstream 413413 10436192 ~ 10460399 (-)
G76493 NA non-coding downstream 417300 10455591 ~ 10456512 (-)
G76488 NA non-coding downstream 428656 10424615 ~ 10445156 (-)
G76458 NA non-coding downstream 461974 10403957 ~ 10411838 (-)
LOC122353057 NA non-coding upstream 55268 10947032 ~ 10950467 (-)
G76622 NA non-coding upstream 68172 10959936 ~ 10987235 (-)
G76632 NA non-coding upstream 102454 10994218 ~ 10994426 (-)
LOC122352521 NA non-coding upstream 134305 11026069 ~ 11044853 (-)
LOC122352520 NA non-coding upstream 143928 11035692 ~ 11038800 (-)
G76498 NA other downstream 393623 10478059 ~ 10480189 (-)
G76438 NA other downstream 490503 10380096 ~ 10383309 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other downstream 590147 10267354 ~ 10283665 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other downstream 1248407 9572372 ~ 9625405 (-)
cd209 NA other downstream 1363382 9489330 ~ 9510430 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other upstream 81117 10972881 ~ 10983738 (-)
G76625 NA other upstream 125346 11017110 ~ 11038731 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other upstream 284805 11176569 ~ 11207252 (-)
ccdc83 NA other upstream 613546 11505310 ~ 11584960 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other upstream 1787226 12678990 ~ 12769417 (-)

Expression


Co-expression Network