btg3 (btg3,LOC107699262,LOC107744619,LOC107747057,LOC107693957,LOC107548882,LOC107578493)


Basic Information

Item Value
gene id btg3
gene name btg3,LOC107699262,LOC107744619,LOC107747057,LOC107693957,LOC107548882,LOC107578493
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 11145385 ~ 11149832 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249948.1
TTTCCTTTGAGCATGCGCACAAGACAAAATCACGTCACCCGTGTTCGCGGGGAGCAGATCTGGAAGTGTCTTGCGCGGTAGGCAGCAGGAGTTGTCCACATGTGGATGAAAGGAAAACACGAAGTCAGTCCTGAATTTCAGCTGAATAGCTAACAATGAAGAAAGAAATAGCAGCGGTGGTATTTTTCCTGAAACGGTTGATAAAGAAGGCTGAGAAGTTGGATGCGGAGAAGGTGGACCTGTTTGTGGAGCGGTTGACGGTAGCATTACAGGAGAAGTACAAGGGTCACTGGTACCCTGACAACCCCAGCAAGGGCCAAGCATTCAGGTGCATCAGAGTGAACCGCTTTCATAAAGAGGATGCTGAATTGCTCAGAGCGTGTGTTGAGAGTGGAGTGCAGTACAAGGACCTCGGACTGCCTAAGGAGCTCACGCTCTGGGTCGACCCTGGAGAGGTGTGCTGTAGGTATGGCGAGAGGAATCATGGTTTCACTGTAGCTACGTTCTCGAgcgaggatgatgatgataaagaGGATGTGACAAAGAAAGTGACGAGCGCTGTGGAGAGGGTCACATCAGATTACCACTCCGGATCCTCCTCGGATGAGGACACCAGCTGTAGAGAGGCCCAGTACACCCCTCCTCTCCACAACCACACTCCATACCAGCTTGTATATGCCAGTCCCCCAGTATGGAATCCTGTACCAAGGAAGAAGTTCTTCCCGGGGAAAGGGCATTACCCTCAGCGGCCACACTACATGATCCGCCCCCCTTGCAGACCCAACCATTCCTTTAAACCGCACAGCTGGGTCCAGCAGGGGTACCGCAGCAAGCACAGCTACTGGGGCAGCACTTCAAACCTAGTACACCAGCTTCAGTGACCACTGTTACTACAGCATGAAAGTTCATTGGTGTCAGTGTGAGGGGTGTTCCATttggaaagtgttttttgaagtTACCACTAAGACGACTgaccaaattttttttaaaaatgtatttttgtagttcTGCTGTCACTGTTTTTTGAATTTGTGACTggtcaattttttaaaaaaaatgataacagTAACTGTTTGCACTTTAGAGTATTTGTAATAGAACATGTATTGGATTAGTAAAATTTCAAGTATTTCAATTTTTATGGTAATGGCAATGTGCTGTATTTATGTTATATGGGATCatttgataacactttacatCATGTTTTTGTCATAGTTTCAGTgaccaaatgttttatttattcacagtaAAGTATTATGTATTGCATAGACCACTTAAATTATggataacattaaaaacattttcaaaaataagaa
>XM_043249949.1
GATCTGGAAGTGTCTTGCGCGGTAGGCAGCAGGAGTTGTCCACATGTGGATGAAAGGAAAACACGGTCGGTATATCTGTCTCTGTTGATGCGGCGAGCTTGCGTAAGTCAGTCCTGAATTTCAGCTGAATAGCTAACAATGAAGAAAGAAATAGCAGCGGTGGTATTTTTCCTGAAACGGTTGATAAAGAAGGCTGAGAAGTTGGATGCGGAGAAGGTGGACCTGTTTGTGGAGCGGTTGACGGTAGCATTACAGGAGAAGTACAAGGGTCACTGGTACCCTGACAACCCCAGCAAGGGCCAAGCATTCAGGTGCATCAGAGTGAACCGCTTTCATAAAGAGGATGCTGAATTGCTCAGAGCGTGTGTTGAGAGTGGAGTGCAGTACAAGGACCTCGGACTGCCTAAGGAGCTCACGCTCTGGGTCGACCCTGGAGAGGTGTGCTGTAGGTATGGCGAGAGGAATCATGGTTTCACTGTAGCTACGTTCTCGAgcgaggatgatgatgataaagaGGATGTGACAAAGAAAGTGACGAGCGCTGTGGAGAGGGTCACATCAGATTACCACTCCGGATCCTCCTCGGATGAGGACACCAGCTGTAGAGAGGCCCAGTACACCCCTCCTCTCCACAACCACACTCCATACCAGCTTGTATATGCCAGTCCCCCAGTATGGAATCCTGTACCAAGGAAGAAGTTCTTCCCGGGGAAAGGGCATTACCCTCAGCGGCCACACTACATGATCCGCCCCCCTTGCAGACCCAACCATTCCTTTAAACCGCACAGCTGGGTCCAGCAGGGGTACCGCAGCAAGCACAGCTACTGGGGCAGCACTTCAAACCTAGTACACCAGCTTCAGTGACCACTGTTACTACAGCATGAAAGTTCATTGGTGTCAGTGTGAGGGGTGTTCCATttggaaagtgttttttgaagtTACCACTAAGACGACTgaccaaattttttttaaaaatgtatttttgtagttcTGCTGTCACTGTTTTTTGAATTTGTGACTggtcaattttttaaaaaaaatgataacagTAACTGTTTGCACTTTAGAGTATTTGTAATAGAACATGTATTGGATTAGTAAAATTTCAAGTATTTCAATTTTTATGGTAATGGCAATGTGCTGTATTTATGTTATATGGGATCatttgataacactttacatCATGTTTTTGTCATAGTTTCAGTgaccaaatgttttatttattcacagtaAAGTATTATGTATTGCATAGACCACTTAAATTATggataacattaaaaacattttcaaaaataagaa
>XM_043249950.1
GTTGATGCGGCGAGCTTGCGTGTGgAAGTCAGTCCTGAATTTCAGCTGAATAGCTAACAATGAAGAAAGAAATAGCAGCGGTGGTATTTTTCCTGAAACGGTTGATAAAGAAGGCTGAGAAGTTGGATGCGGAGAAGGTGGACCTGTTTGTGGAGCGGTTGACGGTAGCATTACAGGAGAAGTACAAGGGTCACTGGTACCCTGACAACCCCAGCAAGGGCCAAGCATTCAGGTGCATCAGAGTGAACCGCTTTCATAAAGAGGATGCTGAATTGCTCAGAGCGTGTGTTGAGAGTGGAGTGCAGTACAAGGACCTCGGACTGCCTAAGGAGCTCACGCTCTGGGTCGACCCTGGAGAGGTGTGCTGTAGGTATGGCGAGAGGAATCATGGTTTCACTGTAGCTACGTTCTCGAgcgaggatgatgatgataaagaGGATGTGACAAAGAAAGTGACGAGCGCTGTGGAGAGGGTCACATCAGATTACCACTCCGGATCCTCCTCGGATGAGGACACCAGCTGTAGAGAGGCCCAGTACACCCCTCCTCTCCACAACCACACTCCATACCAGCTTGTATATGCCAGTCCCCCAGTATGGAATCCTGTACCAAGGAAGAAGTTCTTCCCGGGGAAAGGGCATTACCCTCAGCGGCCACACTACATGATCCGCCCCCCTTGCAGACCCAACCATTCCTTTAAACCGCACAGCTGGGTCCAGCAGGGGTACCGCAGCAAGCACAGCTACTGGGGCAGCACTTCAAACCTAGTACACCAGCTTCAGTGACCACTGTTACTACAGCATGAAAGTTCATTGGTGTCAGTGTGAGGGGTGTTCCATttggaaagtgttttttgaagtTACCACTAAGACGACTgaccaaattttttttaaaaatgtatttttgtagttcTGCTGTCACTGTTTTTTGAATTTGTGACTggtcaattttttaaaaaaaatgataacagTAACTGTTTGCACTTTAGAGTATTTGTAATAGAACATGTATTGGATTAGTAAAATTTCAAGTATTTCAATTTTTATGGTAATGGCAATGTGCTGTATTTATGTTATATGGGATCatttgataacactttacatCATGTTTTTGTCATAGTTTCAGTgaccaaatgttttatttattcacagtaAAGTATTATGTATTGCATAGACCACTTAAATTATggataacattaaaaacattttcaaaaataagaa

Function

symbol description
btg3 Predicted to be involved in negative regulation of cell population proliferation and negative regulation of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including immature eye; nervous system; pectoral fin bud; pectoral fin musculature; and segmental plate.

NR:

description
protein BTG3 isoform X1

GO: NA

KEGG:

id description
K14443 TOB; protein Tob/BTG

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249948.1 True 1316 mRNA 0.44 5 11145385 11149832
XM_043249949.1 False 1299 mRNA 0.44 5 11145385 11149776
XM_043249950.1 False 1220 mRNA 0.44 5 11145385 11149693

Neighbor

gene id symbol gene type direction distance location
LOC122352515 ddx56,LOC107733287,LOC107751685 coding downstream 6694 11081639 ~ 11138691 (-)
cltca cltca,cltc,LOC107548879,LOC107744621 coding downstream 65967 11046407 ~ 11079418 (-)
med13a med13,LOC107693951,LOC107744626,LOC107699258,LOC107747042,LOC107548827 coding downstream 199670 10892793 ~ 10945715 (-)
ints2 ints2,LOC107744627,LOC107699256,LOC107747027,LOC107693886 coding downstream 253621 10873812 ~ 10891764 (-)
auts2a auts2,LOC107693947 coding downstream 382488 10481653 ~ 10762897 (-)
LOC122352533 LOC107747056,LOC107693900,LOC107548843,LOC107548828 coding upstream 1279 11151111 ~ 11158734 (-)
LOC122352716 LOC107576779 coding upstream 18293 11168125 ~ 11172314 (-)
alcama alcama,LOC107548884,LOC107693963,LOC107576815,LOC107699268 coding upstream 141066 11290898 ~ 11350637 (-)
si:ch211-103f14.3 LOC107693965,LOC107747051,LOC107548846,LOC107699269,LOC107744635,LOC107576832 coding upstream 302791 11452623 ~ 11457502 (-)
zpld1a LOC107548885,LOC107693966,LOC107747018,LOC107744615,LOC107576843,LOC107699252 coding upstream 309001 11458833 ~ 11466838 (-)
G76642 NA non-coding downstream 34550 11096963 ~ 11110835 (-)
G76627 NA non-coding downstream 54324 11087586 ~ 11091061 (-)
LOC122352521 NA non-coding downstream 100532 11026069 ~ 11044853 (-)
LOC122352520 NA non-coding downstream 106585 11035692 ~ 11038800 (-)
G76632 NA non-coding downstream 150959 10994218 ~ 10994426 (-)
G76657 NA non-coding upstream 68337 11218169 ~ 11290840 (-)
G76662 cblb,LOC107548831,LOC107699267,LOC107576804,LOC107693962,LOC107747038 non-coding upstream 84540 11234372 ~ 11235690 (-)
G76693 NA non-coding upstream 336074 11485906 ~ 11486428 (-)
G76755 hspa8,LOC100305036,LOC101075813,LOC105019107,LOC107662768,LOC107693988 non-coding upstream 552039 11701871 ~ 11766210 (-)
LOC122353234 NA non-coding upstream 1298710 12448542 ~ 12453651 (-)
G76625 NA other downstream 106654 11017110 ~ 11038731 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other downstream 161647 10972881 ~ 10983738 (-)
G76498 NA other downstream 665196 10478059 ~ 10480189 (-)
G76438 NA other downstream 762076 10380096 ~ 10383309 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other downstream 861720 10267354 ~ 10283665 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other upstream 26737 11176569 ~ 11207252 (-)
ccdc83 NA other upstream 355478 11505310 ~ 11584960 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other upstream 1529158 12678990 ~ 12769417 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other upstream 1632521 12782353 ~ 12789095 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other upstream 2342441 13492273 ~ 13533064 (-)

Expression


Co-expression Network