LOC122352520


Basic Information

Item Value
gene id LOC122352520
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 11035692 ~ 11038800 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251882.1
tctctctctctctctctagctctctctctctagctctctctctctagctctctctctctagctctctctctctctatctatttCCCTCTCCCCTTTCCTGCTGTGTCgcacttctctttctcttcccatAAGTCGTACCTCTCTCTGCTCCCTTCTCATTTGTCTTTCACTTTCTCCCACATGTGTTTGTCTGCTTCAGATGGGCTGCAGTACCTTTTGCATTTGAggaaagtttcttttttttctgtccttttgGACTGAAAACAGGCGTGCACACCTTCTTCAGCTGGTGTTGGCACGGCCACAGACAGATGCTTCAAACAGCTGTCATCAAAATGTCCAGAAGATGGCGCCATAGACCAGTATGAGTTCTTGGCTCTTCCGTTACTAAAAAGatgtttctgtttctgaaatCCACACTCTTTTGCCACACATTGTGTTTAAGAAATTAAAGAGCTTGTTACCTGTAGGGGCAttaaactataatttttttttttatctaaagaaATAATTGTTATCTGTCTTTTAGCCTGTGAAGCTGTTGCCTGACCTGCATTCGGCAGTCATGTTTTTCTGTTAGTCTTTTGTGACAGAGAACAAATGTACTTTATTGGATGATGTAATGGCACGCCTCAGTCATATgatacactgtgtgtgtatataatgtgtcatttctgtaatttttttgtgaacagaattaaatacagttttcatttgTGCACATGAGCGCATACATTGCTGAAAGTGAATGTACAGTTGTAGTTGGTCCTGGCTTATCCAGGTCGGTTTATTTACAGTTCTTAAAATTATACCTTGTCTAACAAATACtaccaaacaacaaaaaaaaactaaacgcaGAAAACATTTTCACGCACTTTTAATGCTTACATTgagtcattacattttaatttgacctAGTTCATTTTGTGGTCACAAttcatatttagtgtttttcttttttttttgattattcatttattctttattttatgtaatttgtttCACTCAGCATAATTTGTGATCAAATGGCGATCCCTTGCTATAATGGAGAAAACTTTATAATATTATCtaaatcagtggttcccaatcttgtttgaggcacccttggaaagcctttcaaaagttcccggcacccttataaggaaatagatatttaaaatctctgtagcttttttattattatttatttattt

Function

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
ko05203 Viral carcinogenesis
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251882.1 True 1193 lncRNA 0.36 3 11035692 11038800

Neighbor

gene id symbol gene type direction distance location
med13a med13,LOC107693951,LOC107744626,LOC107699258,LOC107747042,LOC107548827 coding downstream 89977 10892793 ~ 10945715 (-)
ints2 ints2,LOC107744627,LOC107699256,LOC107747027,LOC107693886 coding downstream 143928 10873812 ~ 10891764 (-)
auts2a auts2,LOC107693947 coding downstream 272795 10481653 ~ 10762897 (-)
cnih2 cnih2,LOC100706298,LOC107718764,LOC107091387 coding downstream 637468 10390116 ~ 10398224 (-)
LOC122352948 LOC107693944,LOC107548866,LOC107720609 coding downstream 651044 10383532 ~ 10384648 (-)
cltca cltca,cltc,LOC107548879,LOC107744621 coding upstream 7607 11046407 ~ 11079418 (-)
LOC122352515 ddx56,LOC107733287,LOC107751685 coding upstream 42839 11081639 ~ 11138691 (-)
btg3 btg3,LOC107699262,LOC107744619,LOC107747057,LOC107693957,LOC107548882,LOC107578493 coding upstream 106585 11145385 ~ 11149832 (-)
LOC122352533 LOC107747056,LOC107693900,LOC107548843,LOC107548828 coding upstream 112311 11151111 ~ 11158734 (-)
LOC122352716 LOC107576779 coding upstream 129325 11168125 ~ 11172314 (-)
G76632 NA non-coding downstream 41266 10994218 ~ 10994426 (-)
G76622 NA non-coding downstream 48457 10959936 ~ 10987235 (-)
LOC122353057 NA non-coding downstream 85225 10947032 ~ 10950467 (-)
G76618 NA non-coding downstream 163605 10871806 ~ 10872087 (-)
G76493 NA non-coding downstream 579180 10455591 ~ 10456512 (-)
G76627 NA non-coding upstream 48786 11087586 ~ 11091061 (-)
G76642 NA non-coding upstream 58163 11096963 ~ 11110835 (-)
G76657 NA non-coding upstream 179369 11218169 ~ 11290840 (-)
G76662 cblb,LOC107548831,LOC107699267,LOC107576804,LOC107693962,LOC107747038 non-coding upstream 195572 11234372 ~ 11235690 (-)
G76693 NA non-coding upstream 447106 11485906 ~ 11486428 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other downstream 51954 10972881 ~ 10983738 (-)
G76498 NA other downstream 555503 10478059 ~ 10480189 (-)
G76438 NA other downstream 652383 10380096 ~ 10383309 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other downstream 752027 10267354 ~ 10283665 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other downstream 1410287 9572372 ~ 9625405 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other upstream 137769 11176569 ~ 11207252 (-)
ccdc83 NA other upstream 466510 11505310 ~ 11584960 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other upstream 1640190 12678990 ~ 12769417 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other upstream 1743553 12782353 ~ 12789095 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other upstream 2453473 13492273 ~ 13533064 (-)

Expression


Co-expression Network