LOC122352948 (LOC107693944,LOC107548866,LOC107720609)


Basic Information

Item Value
gene id LOC122352948
gene name LOC107693944,LOC107548866,LOC107720609
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10383532 ~ 10384648 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250725.1
cATCGTGTCAacagtgtgtggtgtgtgttgtACACTGACCTAGGTTTCCTCGATCATACCCCGCGTGCGGTGACGGCGTTGGGCACCGGGCTCGTGCACACCATGAGCGGGATGAGGACCGTCCTGACCTCGGTCGGGGTGCTCGGGTTTGTCGGTGTGGGCTTTGGCATGTGGGCTATAATTTCACCTGGGGAGGACAGGAACAGGGAATTATTAAAGAATCTGCCAGAGGCCAACCCTGCCCGAATGGAggagaacagaaagagaaatgCCCTCATGCTTCAGGTTTTAAAGGACGCTGCGGAGACGAATGACAACATCGCACGTGGAAATAGTGGCCAGAAATGAAGGTGTTGGCACAGTCGTCGGACTTTGCCCGGAAgtgacttctttaaaaaataactgatCTGCAAATGCTCCATGTGCTGACCATCACTGCCACTGCCACGAATTGCACGTTAAAGAGTTGCTTTGGATTTGTTCTCCTTGCTGGGAAATGATAATTGTAACTTAGCTGTGTTTTGGAacatgttccaaaaaaaaaaaaaggcatggcCTGCTAGTTGCTGGTCCAAAATGGACCacattgtttatacatttatgtaaatatttatggaGATTGTATctcaaataaaactttaaacgtg

Function

NR:

description
PREDICTED: ubiquinol-cytochrome-c reductase complex assembly factor 3-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250725.1 True 647 mRNA 0.47 2 10383532 10384648

Neighbor

gene id symbol gene type direction distance location
LOC122352947 NA coding downstream 200 10382676 ~ 10383332 (-)
LOC122352676 NA coding downstream 2458 10380416 ~ 10381074 (-)
mrpl49 mrpl49,LOC107720585,LOC107693898,LOC107701163,LOC107718758 coding downstream 4514 10377864 ~ 10379018 (-)
znhit2 LOC107720610,LOC107548862,LOC107693940,LOC107718755,LOC107701159,LOC107555156 coding downstream 5804 10375502 ~ 10377728 (-)
LOC122352632 LOC107720618,LOC107718749,LOC559907 coding downstream 80506 10289532 ~ 10303026 (-)
cnih2 cnih2,LOC100706298,LOC107718764,LOC107091387 coding upstream 5468 10390116 ~ 10398224 (-)
auts2a auts2,LOC107693947 coding upstream 97005 10481653 ~ 10762897 (-)
ints2 ints2,LOC107744627,LOC107699256,LOC107747027,LOC107693886 coding upstream 489164 10873812 ~ 10891764 (-)
med13a med13,LOC107693951,LOC107744626,LOC107699258,LOC107747042,LOC107548827 coding upstream 508145 10892793 ~ 10945715 (-)
cltca cltca,cltc,LOC107548879,LOC107744621 coding upstream 661759 11046407 ~ 11079418 (-)
G76426 NA non-coding downstream 66132 10317071 ~ 10317400 (-)
G76421 NA non-coding downstream 129671 10253025 ~ 10253861 (-)
G76413 NA non-coding downstream 141350 10241959 ~ 10242182 (-)
G76388 NA non-coding downstream 199010 10184094 ~ 10184522 (-)
G76327 NA non-coding downstream 277353 10098265 ~ 10106179 (-)
G76458 NA non-coding upstream 19309 10403957 ~ 10411838 (-)
G76488 NA non-coding upstream 39967 10424615 ~ 10445156 (-)
G76489 NA non-coding upstream 51544 10436192 ~ 10460399 (-)
G76493 NA non-coding upstream 70943 10455591 ~ 10456512 (-)
G76618 NA non-coding upstream 487158 10871806 ~ 10872087 (-)
G76438 NA other downstream 223 10380096 ~ 10383309 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other downstream 99867 10267354 ~ 10283665 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other downstream 758127 9572372 ~ 9625405 (-)
cd209 NA other downstream 873102 9489330 ~ 9510430 (-)
G76068 NA other downstream 953732 9427962 ~ 9429800 (-)
G76498 NA other upstream 93411 10478059 ~ 10480189 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other upstream 588233 10972881 ~ 10983738 (-)
G76625 NA other upstream 632462 11017110 ~ 11038731 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other upstream 791921 11176569 ~ 11207252 (-)
ccdc83 NA other upstream 1120662 11505310 ~ 11584960 (-)

Expression


Co-expression Network