G78170


Basic Information

Item Value
gene id G78170
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 453134 ~ 455998 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115685
CTCAGTGATAAGGGGAAAGGTTAGACATTGCCTTGAGAAGATTCGAGAAACGACACGTCTatctttattgtattatttatataattcaagAAACCTAATGCTTTTCTTCCCTTAAACAGTTACAATATACACCCAGCAGATAAACACATAATGAAAACCCTTAAAGGAGTCTATAATATCTTTATGAGCTTCCCCCTAGCTAGCAGATTACATGGGGTAAGTTGTCACAcggtatttaaaagaaaatttcatGAAACAGAATGAAGCATGAAACAGTGAAGACGTGAAAAGAGCGGATGAGTCTGGATGAGCCATCAGAGCTCCTGCTTCCGCTCTGGATCGTCTCTCAGCTCCGTTATCTCTGTCTATTGTTTCAGGTCTTCTCCTGCTTCAGCGCCAAAACCTCCCCACCCCAGAACGAGAAAGTCAGGTCCAAAAACGGAGTGCCTTGTGACACAAACCTAAGCAAACTAATCAgtgaatatatattatgaagAGTTTACTCTACCAATAATTCACTAAACATCACAGTCAAAATCTCTAACATCTCCAGCTACGCcactggatgatgatgatgatgatgatgatgatgatgatgggatTCATGGTATTCTGGTCGCTTCAACCCCTTTCTTCACTTCATGAGAACATGCTGTTCCAGCTTCCACATTCCTAAGATCAAACCATTGTTTATAAAATACTAGAAAATACCCCAATCCAGAGGTCTTCACTTGAGAAGGCATTAGTATGGATTATGGACTATTTTAGCTGAAAGCAACCTTTATATTCGTTTTTTAGTTAAAACGTCGGGCTAGATTTGAAACATGAAGATGTTTACTGATTGATTCGTtgttatcagctgtttggactctcattctgacggcacccattcactccattGCTAATCGCTCATCCGAATCTTGGACGGCGTGAGAAAGAGCAAACGCTAATTTATGCGAATCAGCACGGTTTAATAAACTATGTTTAagatgtttatattaaaaacctGTGTGCGAGGTCTGTTCATCTTAAACCTCGCCGTCTTTATATAATCATATCAGAGTGAGCTCAAGCTGGCTCCAGCCGGTGAACACTGCTGTCTTTTGTTTGCTGCTTAAAGAAAGGAAAAGGGTTTCCTATGTTCGCGTGACAAAGCTCTGTTTACAGAGTCCCTGAGCGAGGAGATGGGTGCCGCCCACTCGGCCCTCAGAGAGCAGAGCTGGACCGGCGCCAGAGACCAGAGACCAGCTTCGTGAAGCCGTCTCGTCCTGCATCAGCTGAGGAACTCCGAGGAAGAGCTGCTGGCATCTCGTCATGCTGTTGTTTCTGAGGTGTTGTCATGCTCTGTGTGGTTTCGTCGGCTGGTGTCGTGTCAGGCCGCTGGAATGTTTCTGGGTGTGATCTCGCAGTGGAGCAAAGGCCAGGCCGGTTCTTAGCAATCCAATTCAATCGATCTAAATGAACGTATTAGTTTACTCCTGTCACTGCTGTAGCATCTAACACAACATATTTATGGAAAAAGGAATGGTTTTTCCACACACTCACCCATTTTGAGAGTGTGGCCTTTTagactagtggaaagaaaacatccacaACACACATTTAAGTCACACGTTTTATATCTATTCACCtctgtatattataataaatgtgacTCTGGAgcaaaaaatgacttaaatctCAGTCAAATTTTTCTATACTAACAAACCATAAGcaaatggaaagattatttattcaaatttcagacgatgtataaatctcagtttagACTGTGACTGTTTTTGTACTCCTGGGTAAAATAGTTAGAGGTCCTGAGTTTGTTCTGAACAGTTCAGAGAGAAGGAGACAATAAACATATGCTTTAGaaactaaatacacaaacaaccaaaacaaaagTAAGCAACAGCCCCTCACCGCTGACCACTGCCCAAACATGAACAACAGCAACAATCTTTGTGTCCTGATCGTTACTCTTCCTCATGTCCTGATCGCTACTCTTCCTCATGTCCTGATCCGTAGTCTTCCTCATGTCCTGATCCGTACTCTTCCTCATGTCCTGATCCGTAGTCTTCCTCATGTCCTGATCCATACTCTTCCTCATGTCCTGATCCGTACTCTTCCTCATGTCCTGATCCGTAGTCTTCCTCATGTCCTGATCCGTACTCTTCCTCATGTCCTGATCCGTAGTCTTCCTCATGTCCTGATCGTTACTCTTCCTCATGTCCTGATCCGTAGTCTTCCTCATGTCCTGATCCGTAGTCTTCCTCATGTCCTGATCTTTACTCTTCCTCATGTCCTGATCCGTACTCTTCCTCATGTCCTGATCCGTAGTCTTCCTCATGTCCTGATCCGTACTCTTCCTCATGTCCTGATCCGTAGTCTTCCTCATGTCCTGATCCGTAGTCTTCCTCATCTCCTGTCCATGACCTGTTCTTCTCTGTTCTCACCTGTATTC

Function

GO:

id name namespace
GO:0009615 response to virus biological_process

KEGG:

id description
ko04657 IL-17 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU115685 True 2455 TUCP 0.43 3 453134 455998

Neighbor

gene id symbol gene type direction distance location
mettl1 mettl1,mettl1-b coding downstream 27469 414402 ~ 425665 (-)
LOC122353667 cyp27b1,LOC107747831,LOC107561793,LOC107684010 coding downstream 40549 406021 ~ 412585 (-)
si:ch1073-456m8.1 NA coding downstream 58948 386034 ~ 394186 (-)
avil avil,LOC107567939,LOC107684013,LOC107711597,LOC107698837,LOC107574443 coding downstream 67810 374160 ~ 385324 (-)
tegt tegt,LOC107574446,LOC107567938,LOC107684007,LOC107713865,LOC107711598,LOC107698838 coding downstream 80662 367846 ~ 372472 (-)
vgll4b vgll4,vgll4b,LOC107750033,LOC107697562,LOC107570332 coding upstream 455677 911675 ~ 933876 (-)
tamm41 tamm41 coding upstream 477854 933852 ~ 939272 (-)
LOC122353727 NA coding upstream 521599 977597 ~ 980116 (-)
LOC122353725 timp4,LOC107571219,LOC107667868,LOC107564284,LOC107687318,LOC107742036 coding upstream 529345 985343 ~ 990262 (-)
mkrn2os.2 LOC107758069,LOC107687314,LOC107564281 coding upstream 584369 1040367 ~ 1043419 (-)
G78164 NA non-coding downstream 14474 431687 ~ 438660 (-)
G78162 NA non-coding downstream 21712 430994 ~ 431422 (-)
G78150 NA non-coding downstream 180170 271740 ~ 272964 (-)
G78149 NA non-coding downstream 181777 270980 ~ 271357 (-)
G78140 NA non-coding downstream 215235 237488 ~ 237899 (-)
G78167 dusp7,LOC107561798,LOC107677944,LOC107697567,LOC107712495 non-coding upstream 2295 458293 ~ 506641 (-)
G78192 NA non-coding upstream 136617 592615 ~ 594641 (-)
LOC122353904 NA non-coding upstream 263277 719275 ~ 721631 (-)
G78226 slc6a11,LOC107746711,LOC107686974,LOC107561801,LOC107697565,LOC107750026 non-coding upstream 266466 722464 ~ 723564 (-)
G78298 NA non-coding upstream 449809 905807 ~ 907574 (-)
G78144 alas1 other downstream 4233 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 47723 402940 ~ 405411 (-)
LOC122354324 arfgap1 other downstream 124095 322213 ~ 329039 (-)
LOC122353949 prph,LOC107683634,LOC107730884,LOC107696041,LOC107737370 other downstream 164188 282263 ~ 288946 (-)
LOC122354323 LOC107706475,LOC107589231,LOC107700775,LOC107591713,LOC107703600,LOC107722831 other downstream 172557 274866 ~ 280577 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other upstream 143109 599107 ~ 794136 (-)
LOC122353728 NA other upstream 516956 972954 ~ 974787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 761221 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 1132706 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 1248626 1704624 ~ 1716129 (-)

Expression


Co-expression Network