G78192


Basic Information

Item Value
gene id G78192
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 592615 ~ 594641 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115709
TCTCTCCGAGCAGTTCTGCGTTCACCCAGAGCTGTATTTTTTAAGAGCCTGCTGATGGAAGAGCTCTGGTCACCTGTGTTTTCTCCTGGACGATCACGCTGGAGCTCTGGGCCACAGGATAGGGCTTGAGAGGAGCTTTAGTGGTGGCCAGTATGAAGTCAGTGTGTGCTCGGATCACTTTATCCAGGTATTCTCCCGCCGGCTGACTGCTGTAATACACCGTGATCTCATCCGACGGGACCAGGTGACCCTGAGAACACACCACTTCTTGCGCAGCTTCTGGATGCGGTTGATGACCTCTCGGGCCACACCCTCGTCCTGCATGGCCTGATC

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU115709 True 333 lncRNA 0.55 2 592615 594641

Neighbor

gene id symbol gene type direction distance location
mettl1 mettl1,mettl1-b coding downstream 166950 414402 ~ 425665 (-)
LOC122353667 cyp27b1,LOC107747831,LOC107561793,LOC107684010 coding downstream 180030 406021 ~ 412585 (-)
si:ch1073-456m8.1 NA coding downstream 198429 386034 ~ 394186 (-)
avil avil,LOC107567939,LOC107684013,LOC107711597,LOC107698837,LOC107574443 coding downstream 207291 374160 ~ 385324 (-)
tegt tegt,LOC107574446,LOC107567938,LOC107684007,LOC107713865,LOC107711598,LOC107698838 coding downstream 220143 367846 ~ 372472 (-)
vgll4b vgll4,vgll4b,LOC107750033,LOC107697562,LOC107570332 coding upstream 317034 911675 ~ 933876 (-)
tamm41 tamm41 coding upstream 339211 933852 ~ 939272 (-)
LOC122353727 NA coding upstream 382956 977597 ~ 980116 (-)
LOC122353725 timp4,LOC107571219,LOC107667868,LOC107564284,LOC107687318,LOC107742036 coding upstream 390702 985343 ~ 990262 (-)
mkrn2os.2 LOC107758069,LOC107687314,LOC107564281 coding upstream 445726 1040367 ~ 1043419 (-)
G78167 dusp7,LOC107561798,LOC107677944,LOC107697567,LOC107712495 non-coding downstream 85974 458293 ~ 506641 (-)
G78164 NA non-coding downstream 153955 431687 ~ 438660 (-)
G78162 NA non-coding downstream 161193 430994 ~ 431422 (-)
G78150 NA non-coding downstream 319651 271740 ~ 272964 (-)
G78149 NA non-coding downstream 321258 270980 ~ 271357 (-)
LOC122353904 NA non-coding upstream 124634 719275 ~ 721631 (-)
G78226 slc6a11,LOC107746711,LOC107686974,LOC107561801,LOC107697565,LOC107750026 non-coding upstream 127823 722464 ~ 723564 (-)
G78298 NA non-coding upstream 311166 905807 ~ 907574 (-)
G78324 pparg non-coding upstream 426835 1021476 ~ 1023810 (-)
G78327 mkrn2,LOC107675967,LOC107571211,LOC107571213,LOC107742032 non-coding upstream 454765 1049406 ~ 1049936 (-)
G78170 NA other downstream 136617 453134 ~ 455998 (-)
G78144 alas1 other downstream 143714 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 187204 402940 ~ 405411 (-)
LOC122354324 arfgap1 other downstream 263576 322213 ~ 329039 (-)
LOC122353949 prph,LOC107683634,LOC107730884,LOC107696041,LOC107737370 other downstream 303669 282263 ~ 288946 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other upstream 4466 599107 ~ 794136 (-)
LOC122353728 NA other upstream 378313 972954 ~ 974787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 622578 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 994063 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 1109983 1704624 ~ 1716129 (-)

Expression


Co-expression Network