G79813


Basic Information

Item Value
gene id G79813
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 7873789 ~ 7880398 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU118059
AGGTGACAAAATGtccattttgggtgaactaaacctttaagcataaataatatgaaaataagtgTGAGAGGGGAATCTAAGTGGCCTGTGCcaatttgatatataaatacaagtttTAAAACTTTACTTCTTGGAGTAAAAATTACAGTCCACCTTTGTTGTTGGGAAAACGTAACATTCTAACATCTCATTTTCTGtttcacagaataaaaaataataatgcgaGGCTGGAATGACATgttgggtgagtaaatgatgacaaagttTTCATTTCAGGCCATCTATTTCTTTATGGGCTTCTTTCTTTATTGAAGATGAGATCGCCATCGGGCCGAAACGAAGCGTCTCATGCTTCATTTCTCAACTACACCATGAAAAGTTTCACGTTCCTCCGAAGCAGACAGCGAGAAAGACTAAATGAGAGTCAAAGAGAGAGGTCATACACGTCGCTTCTTCTCGCTGATGGCGGCGGTCCCTCTTGGTGCTGACAGTTGGGATGTCTCCTCAGCATAATGAAAATTAAAGTGGGTTTCCTCCTCTTAAGTTACCCTAATTAGCCAATCGTCCGAACGGACAGGCAAGGCGATGGCAGTCTCTGGTAGAGAAGGGTGAGCAGGGAAAGTGAGATTGTGTAATTGCAAAGGTAATGGATTTTGTCAGGAGCACCTGTCAGGGCCCTGGTGAAAACAGACGCTGAAGCCAGAAAAGGGAATTGGAGTCAGGATGCCAGCGAGCAGAGCCTCCATCCAAGCCAACCTCACCTGATTGCCAATTTGTGCGAGTCTTCATACATCAAGCGGCTGGACACGTGCGTTAAGAGGCCCGGTGGGTGGCGCTTCCGCGGGCGAACCATTAAAGAATGTGTCAAAGTAAGAGGGCAGACCGGAGAGATTGAAGGATAAAACCCACAGACGTTTAATTCCCAATTTAAtgtgtgaaaaatgaaaacggAGCGCGCCACCGTACTAGATAGGGGCCAGACTGCACAGAGTTGACGAAACTAGACTTGGCAGCCTCATTGGTGAGAATACGAccaaatgaggaaaaaaacccaaagcaaGAAGGTAGAGAAGCACCAAATGAACAGCCTGGGCGACCGCCGTCTCCCTCATGTGAATATGGCCCGGTAATAGGAAATGGAAATGTTCTTTAGACGAAGTGCTGTTGGCATGTGCTTTAAACATtcgtttttttcagaaaaagccGTCGGCTTTGTGAATGCTGTCAGACCTTCCAGAGCAGCTTCAAATAGAAGTCAAGTATATAATTCATTTGGTGCAGAAGATCACATATCCACTCGAAAACGCTTCGTACTTTGAAATAAACAGGGTTGTGGGAATGAAGAATCAATTTGAACACCTTCTGCTGTCGAAACTACCATCAGGGTCTGAAGTGCGGCTTATTTGTGCAAATTGTTGTTTGAAAACAGGCTGTTTTAAATAGTTTGGAATATATTGAGAATAGCGAGTTGATGCAAACACACTGATGAAGAATTCAGACATCAGAAATGAAAGATGTGATTCCAGAGCAGTTTTAAAGGAGACTGTATCAACATTATAATGAGACAAGCTATCCCTAATGACAattcaccatggtaaccatagTTTTCACCAAAATACCATAGTTGCTATTGCAGTCGTCACTGCAATAAACTGTGCCAACCACTTTTTATTAGTTCTTCATACTATTTTACTGAAATACAGTATCATCAATATTCCCAGTTGATGATACcagtctttttatatttttcagctCTCCTCTACGAATGCATGACTCTGGTATATTACCACTTTTGTGATCACAAAGTCCCGTATCacatttttactaattaaaaatccTGTTTCACTCTGAAATGCACCTTAGTATGGAAGTAAAATGGGCTGTGAAAGGAAAACCCTTATATATTCTGATTTTAAAGTCGTAATTTAGGATGAAGCGACAGGATCGCACTTGTATTCTAGCCCAAAGATCTATGAAACTAAAGGATAATCTAGTATTCTAGTACGCTACTGctcaataaatgaatacatatgcACATCAAATATATACGGAAAGggtcagtaaagacatttataatctCAAATAAGTGCAGTTTTTGgaactttacatttattatccttattttaacattgatggtaataataaatatttcttgagcaacaaatcagcatattacaatgatttctagAGGATAGATTTCTAAAGGATCTCGGTTAGCAGGTGAAACCTTAAACCCAAACTTTAGAACGGCAGACTGAGAAAAAGTCATtctatttgcttttaaatgcatcGGGCAAGTTCAGAATAAAGTTCTCGCCAGCAAAAATATCCATTCTGGGTTTCACGCTGATAGTTAATCTTAATCAGCTTTCCATGAGTTAATCAATTACACCTCCCCCGAAATTCTGTCTATCTTCCCCCTCCTCATCATACTGGAGGAGGGAGCTTAGATGAACACTGATTGCGGTGAGAATAGCCCTTTCACTTCTTCCGCGGAATGTGAGACGGCTGCCGAGTTTCCCCAGACCCGTTTAATTCGAGGTTGCGGGAGACAAACAATCGTTCATTTGTCTTCATTAATGTGCCTTTCTCTCGACAGCTCACAGCACGGACAATGGAAAATATCTGTATTATAATCCATCTTCTCATTCCCACAATGCCTCTTGCTCTTTGCGCAATGAGGTACGCCCTATTGATctgtttgttgtctttttcattAGCGCGTCGCATTTGCTCTTTAGAGCGTGTGTGCAACCATCGCGCATAATGATTCCATTTATATCGTTTCGTTTCGATAAAGAGCCATTTTTCTGGGAACGGAGGCACTTTTGTCTCCACCGCTGGCTTCCACATACAAACGGAGCCGCGAGccttatgtttttcttttgtgtagATTGACTCGCACACCCTTTCAGCAGCTTTTGTGTGTTTCGTCTCATTTGGGAGATTTGATGAAGCAGCTTAGCGTTCTTCCTTGCTCCCTCTCTCTGGCTGTCTTTGGCATTATCTTCCTCCGCCCGAATCAGCAGCCGTGGCAGGCGCTATGCCGCTGTAAGTTCCTCACTTTGTTCCAGGCACAAAGttatattattcatttgagTGAATCGCGCAGGCAGCGAGCTCTGGCGTGCTGTCAGGAGGGGTGTGAAGGGAAAGCAAGACTAGGTGGTACGAGCTGTTCCTAGCGCtccaaaaaatacacatataacCGAACAGGTACGACGCGACGCAAAGACGAACGCGGTCCACGTTTACTGTGCGAGGCCCTTTCCGCTCACCTTGTGCTCTTCGTCAGGCAGCTTCCTTCTCTTCAGCCGAGCTGGTGGCGCTTGTGTTGATTTAAACTGCTTGTACGTGCGCTCGTGTCTGTTCCACAAGCTAGTGAGATGCCTCGCTGTCGTCTTAGATTGGCAGCAACAGCTTGAGATACGTTTACTGTACCAGTTGAGTAGAAGTGGATGCCATTCAAACAAGTGTTTTGTAAACACCAGcactaacaaaatattttaaataagcttaAGACAGCATCCCAACAATCATGGAACCTCAGGAATAACTGATTTGgaacaaatcattaaaaactatgttaataaaaaaaaaaatcacaaaattcGACAATTGAAAATGGGAAGAAAATCTCatgatgaaatataaatttttttatctaatatatGTTGGCcgcaattattggcacccctagaaTTTTTTATGAGTTAAATATGTTGGAGCAGTAAAAATGACTATTTCCACCATCAGGGAAATAATTACGTATTTCCAATCAACAGAAAggtttatgaaaatatttggaAGAGGACGTGTCTAGAGTGTCCTTATAATGCATGGTGAGGAGGAGAGTTTGAGTGGCCAAAGACTCTCCAATGACCACAGCTGGAGAATTGCAGAAAATAGTTTTGGGCTCggaaaccttttaaaaaattgtcaaaCAGCACTTACATGACCACATATTGTTTGGGGAGGGTTTCAAGAAAATAATTTCCTTGCtcattcaaaaccaaaatacagtGTATTCAGTTATCAGACAGGAATGGGGCTTCAAATGgtcagatgaaactaaaaaatgagctttttagcAGCAAACCCCCAAGATGGATTTGGAATAAAAAGTACCCCATGTGTACAATGAAATATActgctttatttttgatgtCGGGTGTCTAAATTTTAACTGTAGGTCctggacatcttgtttagacaTCAGGGATTCTATCAAATACCACaagataaaaaattataaagtaactgactctgttagaaatcttataatAGGCCATGGTTGGATCTTCCATTGGGACAATAATCctaaacaaacatcaaaatcaacacaaaaatggCTCACTGAGCACAAAATTAAGCTTTTGCCATGACTCTCTGAACCCTGTAGGAAATGAGTGAGGTGAactaaagagaaaaaagcaCCAACATGGAGCTGGTATTCTGCATGAGAGTGATTCTGCATGAaggaatggtctctgatctcttATCAGATATTCTCCAAACTCTTCTGCCATTACAGGAGAAAATTCAATAATTGGGTGTCAATAATCGTGGCTAGTGGCCAGTATgaaccatatatatattattgttgttatcaAATGGTTTATCGCAactaatcacatccaaaatgtgtgtactgtgtatattatctatttataaatatacacatatacagtatatattttaaaaatatttacatgtattgtacatatttataataacatcatttatataaaaactttttaacatgtaaacattttctgaaatacatgcatatgtgtttatttatacatacataatacatatacacagcacacacagtttatgtaaacaaaaagccatttttagTTGCggttaatcatttgatagcactatATGGTCTTGCAGTGCATTCCAGGATCGGCCTTCTCAGATCTTTTCATGCGGCGCTGCTTTATTTGGCCAAGAAAGAAGCATCTTAGAAGACTGCAAAATTAATTTGCCTACCTTTTGGAACAGCCTTCACGCCTTGATCCCTCAAAATGCCTCCTCAATAGGCAGCTCACTTGGTTCTGGAACAGAGCGCATCTTTGCACGAGGGGAACATAAGCAGTTAGCCGCAGATGTGTGGCGagaagcttgtttatttttcgTAATCAGGTTTACGAGCCCCTCTTTCTCTCGCCACGTCTCAGGGAAGGATGAATTCGGTATGCATACTGTGCATCACGCCTCAAGGTTAATGACACTTCAGAGGAGTCAGAcgcacacagagaaagagagagcaaaatATTGCACAATCCCCCCCATTAGTGGAAGGAGAATACCATCGCAGAGCCAAAGCAACGGCCCACATCTACTCAGCGTGACGTGTATGTTGGAGGCCAGGGTTAAGACAGGACCCCTACCCCcaactgaatgtgtgtgtgtgtgtgtgtgtgcttgggATGCTGGGCACGTCTTCGTCCGACGGATTCTTCCGGCCCAGGGAGCCTCATTAGAACAACTTGTGCAGCAGCTTTAAAGCCGGGATAAGCTTAGCAGGCAGGCGCTGCCGATAAAAGAGTTATGTATCACGTTCTTACACAAGCATGACAAAAAGCCCCCTTATCCAGGTGCCACGCAAGCCTGAACTCCTACGGCGCGCTGCCGAGGACAACGATGCCGAATCTGTGCAAATTGTTCTTAGTCGATCCTCCTGCATTGAGAGGAAACAATAATACGTTTGTCAGAAAATGGAACGGATTTAGCCAGGGCTTTTTGTGATTGTAATACGCTTTTAACTTGATTTGTTTCAATGCAATATGTTTTAAGTCGAAATGGGGAAAAATGACAGCTGGGCTTTAAGGCATAAATTAAGTCTGCGGAAATAATTCGCTTAAACTGTGCTTAATTCTATTCCGAGCCTAGCGCGCACATACATTGAACgttttctggggttttttttttgtttcttttaccAAACactaaaaaccaaacaaatatttttagcgATCCAATATTTTGCTGCGTGGTCGCGTTTTCTCTTTAAATTGGGTTTTCTGAGATGCTGTAACCTCTTTTCATTGATTTGCCATTAATAAAACTCAGTGTACAGGGGGAAAAATACAATATCTGACAATGTGTCCAAATCGCAACACTGATactgtaatgtaaatatatttctgctgCAGACGTCGATATGTTGGAGATGTAATATTCAAAGTGTACTGCCATATCAAAGTCATTTTCCTTCTATTGTGCACTTACTATCATTgctgaacatgaaagtgaaatgTACTGTGTGCCTTTATCAATATTAATGAGGAGGtaataatgaatatgcattttcattccGGGAGAGCCATACAGCTAATAAGCCATGATCTGGTGAAATGAGatgcaaatgtttttcattaataaaatatattaccgTGAGTGCTTCTTGCGTATGCATCACTTCAATACTTACAAAAGATTGTTCACACAATCGGTTCTCGTACAAATGCTTCCTTTTGGTGGCGGCTTCCTACGTGGCTGCCAAAAACCTGTAAGAAAAATGATGCCTAATAAAAGTACACTCCGAtacttttgaataaaacatcttttgCACTGTA

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU118059 True 6590 lncRNA 0.40 2 7873789 7880398

Neighbor

gene id symbol gene type direction distance location
si:ch211-117k10.3 si:ch211-117k10.3,LOC107654380,LOC107573302,LOC107654420,LOC107751187,LOC107582464 coding upstream 147689 7719956 ~ 7726100 (+)
LOC122354605 LOC107756631,LOC107654376,LOC107751186,LOC107654419,LOC107582394 coding upstream 155212 7713238 ~ 7718577 (+)
LOC122354656 epha8,LOC107756634,LOC107565732,LOC107654383,LOC107582396,LOC107654448,LOC107751217 coding upstream 395408 7460992 ~ 7478381 (+)
cldn19 cldn19,LOC107582397,LOC107751184,LOC107565733,LOC107654447 coding upstream 546552 7316449 ~ 7327237 (+)
p3h1 p3h1,LOC107756620,LOC107751183,LOC107654416,LOC107582441 coding upstream 570629 7295280 ~ 7303160 (+)
klhdc8a klhdc8a,LOC107743283,LOC107654360,LOC107581204,LOC107700004,LOC107582463 coding downstream 24888 7905286 ~ 7923424 (+)
slc41a1 slc41a1,LOC107654373,LOC107698497,LOC107751220,LOC108254937 coding downstream 52207 7932605 ~ 7957674 (+)
etnk2 etnk2,LOC107694884,LOC107751192,LOC107698335,LOC107582391,LOC106565623,LOC106583121 coding downstream 98748 7979146 ~ 7990954 (+)
yod1 yod1,LOC107580473,LOC107743281,LOC107699783,LOC107582461,LOC107694882,LOC107751243 coding downstream 155469 8035867 ~ 8040626 (+)
zgc:158258 LOC107743280,LOC107694864,LOC107580189 coding downstream 161940 8042338 ~ 8046954 (+)
G79748 NA non-coding upstream 43478 7829953 ~ 7830311 (+)
LOC122354645 NA non-coding upstream 375600 7486210 ~ 7498189 (+)
G79706 epha8,LOC107654448,LOC107751217,LOC107582396,LOC107654383,LOC107565732 non-coding upstream 498115 7372912 ~ 7375674 (+)
G79707 NA non-coding upstream 501416 7349535 ~ 7372373 (+)
G79690 NA non-coding upstream 593369 7278412 ~ 7280420 (+)
G79863 LOC107751197,LOC107697444,LOC107582459,LOC107694863,LOC102793523,LOC103359687 non-coding downstream 321325 8201723 ~ 8202344 (+)
G79864 NA non-coding downstream 324108 8204506 ~ 8204923 (+)
G79865 NA non-coding downstream 324599 8204997 ~ 8205706 (+)
G79868 NA non-coding downstream 330481 8210879 ~ 8211520 (+)
G79869 NA non-coding downstream 331272 8211670 ~ 8216411 (+)
elk4 LOC107751188,LOC107654379,LOC107756628,LOC107654450,LOC107582393,LOC107573300 other upstream 132348 7727787 ~ 7741441 (+)
G79640 per3,LOC107751173,LOC107756610,LOC107654358 other upstream 1049244 6818545 ~ 6824545 (+)
megf6b megf6b,megf6,LOC107712944,LOC107582451,LOC108431627,LOC107592884,LOC107657979 other upstream 2526957 5286439 ~ 5346832 (+)
samd13 samd13,LOC107592550 other upstream 3489810 4375839 ~ 4383979 (+)
prkacba prkacb,prkacba,LOC107745335,LOC107669012,LOC107592581 other upstream 3498401 4368425 ~ 4375388 (+)
bsnb LOC107743257,LOC107694876,LOC107579790,LOC107697600,LOC107751196,LOC107582388 other downstream 195021 8075419 ~ 8150569 (+)
G79889 LOC107751201,LOC107697072,LOC107743253,LOC107578868,LOC107694869 other downstream 400417 8280815 ~ 8282901 (+)
G80058 LOC107743242,LOC107659551,LOC107575478,LOC107685987,LOC107582425,LOC107751213 other downstream 721789 8602187 ~ 8604284 (+)
G80095 grm2b,LOC107715788,LOC107575639,LOC107659540,LOC107718191,LOC107685980,LOC107582373 other downstream 937992 8818390 ~ 8819279 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 994890 8875288 ~ 8878988 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G436642 NA non-coding CI01000306 null 10077983 ~ 10109617 (-)