G81717


Basic Information

Item Value
gene id G81717
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 13887333 ~ 14306577 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120952
aatcaaatgaTTTTGAGATTATTGATTACAATCTTGTTTCTGCCATGCagtaaaattttttaaaaagtgttaattGTACAATCGTTTCatgcaattatattatatatttatatatcgtaatgttttatttagcaatttatcaaaaataatagcGCAAAATTGCAGTAgacaaaattgtgaaataaaaaatctatatattttttttatctttttttagaagaaaaaaaacattctcagaatttagaaaataaaagtcagaattgtgagattaagtcacagataactttttttttatcccatggTGAAAACAAGATTccatagaatatatatatagagagagagagagagagagaattttaaatttttttttttggaccccactgtatCTGTCaatctaaaaaaacatgtttataataCAGGGGATGAAGAGCAAGTTGAAGTCTTTGGCAATTGAACGAGATGTTTCCTGCTGAAGTTTTAGCCGTTTTGTTTCAGCCAGATACATTGGTCATCTGGGTACTTGAAAGAAATAATAACCCTTAAAACTGTGCAAATTCAATTCGTGATTCCTATGCAATCTAAAAGCATTAATCAACCAACAATCTGGAATATTTCTGGTTTAATATAAGCAGCATATTTAGGGCTGAGAAATAGGGATGGTCTCAGATGGCGGTGGATACACTGTAGTTTATTTAGCCGTAACACAAAAAACTGCAATACTCgcttcagtttttcttcttcaaactGTGCCATTCAGAATAGTGTTTCATATGTTTACCATGAGCGCGTTTCTCTCCTGAAAATAGTGTACATAAAGCTTATCACTGGAATATGACGACTGCAtgtcaaaatgagaaaaaaaaaatgtttagaacgAGGTGTCCGTTAGCTTTTTGGTATGAAGTCTTCATTAGCTTGGCTGATTCCAGTAAAAAGATTCACTGCACATAAACCAATGTAGACCCCTGAGACACAGTGCATGTATTAGTTAATGCTAGTGGTGTCACTTTACCACGACTATGATCATGTTTAGAAACAGAATGTATTTATGGGGCTCCGTGTTATGATAGTGCATTACACCAAATGACCTGCTTGACAATGCTTGACCAAAgcactactgttttttttctcctgatcTGTTACATTGCTGGTTTTTCTGTTCGTTTTCGGTCACGGTAGCATTTTTCCGCTCATCGCGATTGTAGCATGTTTGGGTCGTACCCAATCCCACCCCCCCAACCCGCTCCCTGTCGATTTGCTCGGCCCTTGCATCTTGGATTTCCGTCTGAAATCCCGTCAGAAATCTCAAAGATACGGCAGCTTTCATACCGAAGTATGTGCATTTCTTCTAAATCCTCTGGCTGCTGCTTCTGGAAACTTCAGCCGCAGCTTTTGCTCATGAAACTTGGACTGTTTAACCTTCTGAGAATGCCGACTGTTCGACCCTGTGCGTGCGCCCCCAACTCCCCCAAACTCTGGTTTATCGTGAAGGTGTTCTTTGTGAACCGTTTTCTGTATTGCACTGATAATTCAGAGGGAAATCGATTCTGGAAGCGTATATATATACTTCCCAATGcaaaccgaaaaaaaaaaagggctcaGTCTGTTTGTTGCTTTACCCTGTGAAACATTAGGAGATGTGGGCAGACTGCATGTGTTTACTGGACAAATAATCTGTTGTTGATGCACATGCGGCATGCAGCCAAACTGGAGCGGTCTTCATTTGTGTCCTGATTATTCGTGTGAGAGCAAACCCCCTTTAGCGTAAATTCCCCTTTAAGCCTTAATAGAACTGCTGAGCAGTTAGTGACCATGATTACCATGTCCGTACCATTAAGACTAATAAGGACGTAGCTGACTAGATGGGATGTATTTCTTGATAAACGTACCGATAGTGACCCGTAGGATAGAGCTGAGCAGTATATCAACCCCTTCCCCTTAAATCATAGCATTAGCGTAAACTAAGTGCCATCTACATGGATCTATTTTTGATTGCGCCAACTGTCATCTCACTTAAGGCAGGtttaataagtatttaaaaagacaCTGTAATCGAAGCgctcgagagagagagcgttAGCTTGCAGAATGTGCATCGAATCTTTGTGATCTCTCATTTCGTGAGCGTAGACAATGCTCACTCTTTATTGGAGTTAACGGTATATTAGGACATATAATTTGTGGTTGTCTAGAGCTTTTATTGGGTTGGATCTATCCAGGCGCCCAGTTCTATAGTCGCTGTGCTGGTGTGGTCATCTTTGTCTCCTATTTGTGGTAACTGATTGTAGAAGGAACTGATTTCGTCTTTGTCGTTTTGCTGGTCCTTTTcctttctcagaaaaaaaaaaaaaaaagctaaatatggATGTGCATGATGTCTCAGCTGCATATATCAGAGCCTTCttgttatatcatttatattttgtaacctGTATTTCTGtacgtgtttttaaaatatatatatatatatatatatatatatatatatatatttaaattctcaGTGCTAATGCAGTGTCATCAATTTACGTCTGTGATTGGGGGTTATGAggaaagctataaaaaaaatggagTATAAAATATGACACACACGACAGAAATATACAACTCACATTCATtaatcttgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120952 True 2658 TUCP 0.37 2 13887333 14306577

Neighbor

gene id symbol gene type direction distance location
LOC122354272 crtc1,LOC107747695,LOC107665843,LOC107553560,LOC107597189 coding upstream 368 13876450 ~ 13886965 (+)
klhl26 klhl26,LOC107680559,LOC107597147,LOC107747058,LOC107553559,LOC107665842 coding upstream 11825 13867446 ~ 13875508 (+)
rab3ab rab3a,rab3ab,LOC107553558,LOC107680521,LOC107665838,LOC107597148 coding upstream 28405 13845967 ~ 13858928 (+)
pde4cb crtc1b,LOC107747102,LOC107680520,LOC107757940,LOC107665846,LOC107553556 coding upstream 42466 13791839 ~ 13844867 (+)
LOC122353752 NA coding upstream 96928 13777335 ~ 13790405 (+)
LOC122353760 NA coding downstream 15937 14322514 ~ 14325121 (+)
ap1s2 ap1s2,LOC105893284,LOC107602789,LOC107665854,LOC107732206,LOC108438658,LOC107656112 coding downstream 56998 14363575 ~ 14367175 (+)
rbb4l rbb4l,rbbp7,LOC107753839,LOC107562083,LOC107656110,LOC108438657,LOC105893332,LOC103023991,LOC107730765 coding downstream 67313 14373890 ~ 14381533 (+)
rtel1 rtel1,LOC107723052,LOC107753877,LOC107665833,LOC107562060 coding downstream 87323 14393900 ~ 14409239 (+)
zgpat zgpat coding downstream 103484 14410061 ~ 14415303 (+)
G81711 NA non-coding upstream 25843 13860971 ~ 13861490 (+)
G81708 NA non-coding upstream 101472 13785629 ~ 13785861 (+)
G81704 NA non-coding upstream 104571 13782496 ~ 13782762 (+)
G81699 NA non-coding upstream 110867 13776170 ~ 13776466 (+)
G81484 NA non-coding upstream 145222 13702878 ~ 13742111 (+)
G81732 NA non-coding downstream 64729 14371306 ~ 14372370 (+)
G81749 NA non-coding downstream 143453 14450030 ~ 14450234 (+)
G81750 NA non-coding downstream 144762 14451339 ~ 14451746 (+)
G81752 NA non-coding downstream 178448 14485025 ~ 14485263 (+)
G81736 NA non-coding downstream 184128 14490705 ~ 14493029 (+)
LOC122353915 vmac,LOC107680554,LOC107685109,LOC107757942 other upstream 182358 13701235 ~ 13704975 (+)
LOC122353908 vmac,LOC107680554,LOC107757942,LOC107685109 other upstream 421917 13460464 ~ 13465416 (+)
ranbp3a LOC107597153,LOC107680549,LOC107757943,LOC107685118 other upstream 477207 13402287 ~ 13410126 (+)
LOC122354403 LOC107747219,LOC107747210,LOC107680505,LOC107757944,LOC107597155,LOC559131,LOC107580225,LOC107685131 other upstream 503490 13374021 ~ 13383843 (+)
G81434 NA other upstream 656241 13228943 ~ 13231092 (+)
LOC122353763 NA other downstream 45723 14352300 ~ 14354705 (+)
ptgfr ptgfr,LOC107753832,LOC107562064,LOC107655972,LOC107665835 other downstream 159315 14465892 ~ 14468603 (+)
zfyve9b zfyve9b,LOC107753830,LOC107656105,LOC107562066,LOC107723065,LOC107665831 other downstream 165989 14472566 ~ 14488809 (+)
palm1a palm,palm1a,LOC107656088,LOC107674557,LOC107723854,LOC107753814,LOC107593145 other downstream 517830 14824407 ~ 14855872 (+)
G82072 LOC107753843,LOC107680456,LOC107562070,LOC107718864,LOC107563489 other downstream 974402 15280979 ~ 15282157 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G184592 NA non-coding NC_047605.1 CM018551.1 19459846 ~ 19464541 (-)