G82358


Basic Information

Item Value
gene id G82358
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 16337966 ~ 16338260 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU121960
ataaaagtgaCCCATGTGACTATATTCCCCGTCTTCTGAAACCATATGATtaaaattatagttattattcactaaaaaaaatcttctccTCTTACGTAACACTCAAATGCTTTGTCTGTGTCATGCCATATGATGCCTTGagtattttgtacattttatgaaatatgcacaaaacttttattttggattaatcgAATTGAATTTATCGCTGCCCACCACTAATAAATACAGATGTAATTAATCCAACTTTGGGTCTGGAACAACAGATGTTGGCATACTGTCTGGGGAGTcgcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121960 True 295 lncRNA 0.34 1 16337966 16338260

Neighbor

gene id symbol gene type direction distance location
nlgn1 nlgn1,LOC107593140,LOC106584306 coding upstream 219187 15900885 ~ 16118779 (+)
ect2 ect2,LOC107674529,LOC107718889 coding upstream 507148 15804699 ~ 15830818 (+)
slc4a10a slc4a10a,LOC107674536,LOC107593138,LOC108412979,LOC107564899 coding upstream 599238 15704973 ~ 15738728 (+)
tbr1a LOC107753796,LOC107593157 coding upstream 634484 15697077 ~ 15703482 (+)
psmd14 psmd14,psde,LOC107563735 coding upstream 641035 15686684 ~ 15696931 (+)
si:ch211-51h4.2 LOC107753790,LOC107655988,LOC107600313 coding downstream 8494 16346754 ~ 16445234 (+)
LOC122353773 plppr3b,LOC107753813,LOC107593129,LOC107656087,LOC107674515,LOC107602805,LOC107723853 coding downstream 220640 16558900 ~ 16563718 (+)
LOC122354135 LOC107739009,LOC107548904,LOC107677253,LOC107712820,LOC107697972,LOC107590274,LOC571722 coding downstream 232851 16571111 ~ 16574477 (+)
LOC122353774 LOC107681051,LOC107740425,LOC107684348,LOC107730326 coding downstream 235847 16574107 ~ 16591075 (+)
LOC122354647 kcnmb2,LOC107656067,LOC107600278,LOC107699784,LOC107753344 coding downstream 398958 16737218 ~ 16760688 (+)
G82328 NA non-coding upstream 498735 15838604 ~ 15839231 (+)
G82243 NA non-coding upstream 720977 15612227 ~ 15616989 (+)
G82229 NA non-coding upstream 759808 15577348 ~ 15578158 (+)
G82222 NA non-coding upstream 784935 15552130 ~ 15553031 (+)
G82133 NA non-coding upstream 804062 15533430 ~ 15533904 (+)
G82413 arpc4,LOC107753787,LOC108440459,LOC107673563,LOC107600279 non-coding downstream 428110 16766370 ~ 16889861 (+)
G82414 NA non-coding downstream 440669 16778929 ~ 16902990 (+)
G82412 rab7a,LOC106583206,LOC103385930,LOC101061812,LOC107385419 non-coding downstream 444859 16783119 ~ 16783856 (+)
G82416 rab7a,LOC106582926 non-coding downstream 568227 16906487 ~ 16908162 (+)
G82501 NA non-coding downstream 713963 17052223 ~ 17393686 (+)
mcf2l2 mcf2l2,LOC107656072,LOC107753795,LOC107563754,LOC107674528,LOC108439422,LOC108270998,LOC107718904 other upstream 535941 15741637 ~ 15802025 (+)
G82131 NA other upstream 806476 15530593 ~ 15531490 (+)
col9a1a col9a1a,LOC107674561,LOC107563512,LOC107753862,LOC107680514,LOC107718896,LOC108438673 other upstream 846190 15456882 ~ 15491776 (+)
hap1 si:dkey-28e7.3,LOC107680538,LOC107674537,LOC107718874,LOC107753848,LOC107564818,LOC107562051 other upstream 937774 15389066 ~ 15400192 (+)
LOC122354546 abcc10,LOC107753844,LOC107680503,LOC107674523,LOC107718869,LOC107680501 other upstream 1006334 15306652 ~ 15331632 (+)
LOC122353648 cap2,LOC107706226,LOC107754274,LOC107592045 other downstream 256302 16594562 ~ 16604382 (+)
G82555 cstf1,LOC107727783,LOC107567730,LOC107555629,LOC107685639 other downstream 1261626 17599886 ~ 17600362 (+)
G82620 fam83d,LOC107727784,LOC107581924,LOC107655036,LOC107749477 other downstream 1356815 17695075 ~ 17695648 (+)
LOC122353788 si:dkey-49n23.1,LOC107719940,LOC107720332,LOC107691183,LOC107657315,LOC107557964 other downstream 1436208 17774468 ~ 17789002 (+)
LOC122353540 fam19a1,LOC107729407,LOC108280984,LOC105017301,LOC106583036,LOC107600286,LOC107656058,LOC107558887 other downstream 1527793 17866053 ~ 17988564 (+)

Expression


Co-expression Network