G82243


Basic Information

Item Value
gene id G82243
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15612227 ~ 15616989 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU121783
CTGGGCACAATATTCATCAGCATCAGGCCGTCAGTGTTAGTGAAAGATACGAGGCCctggagagaaacaggagaagGATGGAGAGTGTTTATGTGGGGCCcgagagaaagaggaacagGACGGTCTTGAGAACTTGTCCTCTGCTAACGTCTTCGATCCAGGTCAAGGTCAGCAAGAACAATCAGGAGCGTCCCACAAGGTGGACATGAAAACTGAGGATTGCATAACTGTTTCGGTTCCGTTCCAGTTTAATGCTGTGAAGCACAGACAACCACGGGCATCTATGTTATTCGGGCAGAGATGAGCCAACAGATGTTGGTGTAAACTTGGGTGCATGACGCTTTTTGGACTCATATGCACTTAACCTGAATTACCCAAAAGACCTTAAAAGTGTTTCAGAAAATCGTGACGGAACTGGATACCACCAAACTGTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121783 True 437 lncRNA 0.47 2 15612227 15616989

Neighbor

gene id symbol gene type direction distance location
lgsn lgsn,LOC107753865,LOC107597143,LOC107718882,LOC107563521 coding upstream 113253 15495043 ~ 15498974 (+)
mrpl4 mrpl4,LOC107753863,LOC107680457,LOC107597183,LOC107680460 coding upstream 144281 15464548 ~ 15467946 (+)
c11h6orf120 zgc:77929,LOC107680519,LOC107579608,LOC107674518,LOC107563672,LOC107718909 coding upstream 148576 15460840 ~ 15463651 (+)
LOC122353576 krt93,LOC107753853,LOC107674539,LOC107718879,LOC107563541,LOC107680517,LOC107753855,LOC107680518,LOC107562075 coding upstream 163190 15446171 ~ 15449037 (+)
LOC122354569 krt94,LOC107563560,LOC107753855,LOC107680518,LOC107562075,LOC107674540,LOC107718880,LOC107753853 coding upstream 169145 15440488 ~ 15443082 (+)
rbms1a rbms1a,LOC107753799,LOC107718885,LOC107656076,LOC107563588,LOC107674550 coding downstream 45890 15662879 ~ 15679375 (+)
psmd14 psmd14,psde,LOC107563735 coding downstream 69695 15686684 ~ 15696931 (+)
tbr1a LOC107753796,LOC107593157 coding downstream 80088 15697077 ~ 15703482 (+)
slc4a10a slc4a10a,LOC107674536,LOC107593138,LOC108412979,LOC107564899 coding downstream 87984 15704973 ~ 15738728 (+)
ect2 ect2,LOC107674529,LOC107718889 coding downstream 187710 15804699 ~ 15830818 (+)
G82229 NA non-coding upstream 34069 15577348 ~ 15578158 (+)
G82222 NA non-coding upstream 59196 15552130 ~ 15553031 (+)
G82133 NA non-coding upstream 78323 15533430 ~ 15533904 (+)
G82116 NA non-coding upstream 87629 15502926 ~ 15524598 (+)
G82109 LOC107718897,LOC107674554,LOC107680534,LOC107597144 non-coding upstream 112255 15499114 ~ 15499972 (+)
G82328 NA non-coding downstream 221615 15838604 ~ 15839231 (+)
G82358 NA non-coding downstream 720977 16337966 ~ 16338260 (+)
G82413 arpc4,LOC107753787,LOC108440459,LOC107673563,LOC107600279 non-coding downstream 1149381 16766370 ~ 16889861 (+)
G82414 NA non-coding downstream 1161940 16778929 ~ 16902990 (+)
G82412 rab7a,LOC106583206,LOC103385930,LOC101061812,LOC107385419 non-coding downstream 1166130 16783119 ~ 16783856 (+)
G82131 NA other upstream 80737 15530593 ~ 15531490 (+)
col9a1a col9a1a,LOC107674561,LOC107563512,LOC107753862,LOC107680514,LOC107718896,LOC108438673 other upstream 120451 15456882 ~ 15491776 (+)
hap1 si:dkey-28e7.3,LOC107680538,LOC107674537,LOC107718874,LOC107753848,LOC107564818,LOC107562051 other upstream 212035 15389066 ~ 15400192 (+)
LOC122354546 abcc10,LOC107753844,LOC107680503,LOC107674523,LOC107718869,LOC107680501 other upstream 280595 15306652 ~ 15331632 (+)
G82072 LOC107753843,LOC107680456,LOC107562070,LOC107718864,LOC107563489 other upstream 330070 15280979 ~ 15282157 (+)
mcf2l2 mcf2l2,LOC107656072,LOC107753795,LOC107563754,LOC107674528,LOC108439422,LOC108270998,LOC107718904 other downstream 124648 15741637 ~ 15802025 (+)
LOC122354637 naaladl2,LOC107674503,LOC107600312,LOC107568636,LOC107674502 other downstream 536311 16153300 ~ 16345752 (+)
LOC122353648 cap2,LOC107706226,LOC107754274,LOC107592045 other downstream 977573 16594562 ~ 16604382 (+)
G82555 cstf1,LOC107727783,LOC107567730,LOC107555629,LOC107685639 other downstream 1982897 17599886 ~ 17600362 (+)
G82620 fam83d,LOC107727784,LOC107581924,LOC107655036,LOC107749477 other downstream 2078086 17695075 ~ 17695648 (+)

Expression


Co-expression Network