si:dkey-264d12.5 (LOC107592908,LOC107756646,LOC107654411,LOC107654359)


Basic Information

Item Value
gene id si:dkey-264d12.5
gene name LOC107592908,LOC107756646,LOC107654411,LOC107654359
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 5887765 ~ 5896215 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251441.1
cacatacacacacacacacacacacacacacacacacgctcgacCTGATGAACGTGAATTCCGCGCAAATGCTATACAATACTTATAGCGTTTCATTATAACGTGCGTTTCTAGGCGACCGTAAAAGTTCGGTTAGGACTCCACATGAAAAACAGTCCGTTTGAATTCACTGCAGCAGAGTTTGGACAAGCGAcgccgtgtgtgtgtttacgttCAAAACAATAACCTAAAAcgatttaagtatttaaatggtTCTGAATAACGTCGAGAAATGTGCACAGCACAGATGGTGCAGGACATGGATCAACTGCTGCAGGAGGAAGGGTTGGACTCCTCGGCCTCCAGCAACGAGCGTTTATCTCTGCTGTGGCAGCTTTACATGAAAAGTGAAAGTACCGTGAGATCCCTCAACCAACAGATACAAGATCTGCAGAAGGAACGTGTTGCTGAGATTGAAAAGGTTCAGCAATACATTAATCACATTAAGAGTCTCACAAAGACCCGAGACTCTGTGGCTTTACATCTCgagcaagaaaacaaaatgctcCATGCAACTCTGGAGGACATCCATCGGCAACAAGAAGCACAGCGGAGTGAGATCTCTGAGATGTTACTCCAGGAAGGTCTGGCTGATATTATTTGCATCGGCTTGAGTGAACAGGTGGCTTACCTCCTCGCAGACAGAGCCTCCCTGTTGGAGAAAATACAAACTCAGGAGAACGTGGATGTGAAGACGGCAGAGGACCCTGATGTCCATAAGGAGGATTGTAGAGCGAATGTGGTCAAAGTGACAGCACCGCACGCTCAGAGCCCTTGGAAGAGGCTCCTAGGACTCAGAAAGGCTGCTCAGAGTAAACCCAAATTACTGCCTGCCGCTGACCTGCAGTGCAGTGCCGATGACAAACTGAAGGGGCGGATGTTGCTAGAACTGGAGCGAGATGTGGAAGAGGCATCTGCTCGACTCGACATGGCCCACAAAGAGATCCGCAGACTCACAGATGAGCTTGAGTCGGCTCACCTGACACAAAGGGCTTATGAACCAGAGCTGCAAGAAGCTCAAATGGAAGTTGCTCATCTGCGCCATGAAGTGGAGAAACTGAAATGTTGTGAAGTTGCTGAGTTAcgaaaaataaaagagatgaACGAGAAACAGGAAGAAGAGCTGTGCCGCCTTAGGGAGACTGTGAAGAGGCTACAGGCAGAGCCCGAAAAGTTGTTTGAAATGACAGAAGCCCCTGACAGAACCAGcacttcacccaaaaacaagAAGCCTCAGGAAGAAGATATCCATAAACGGTGCTTTGATGAGATGCAGGAGAGGTTGCACGTGCTGCAAGACCTGACCCAGGTCACGCTGAAGCTGCGGATGGAGTATGAGATGGAGGCTGACCTGCGCAGAAGGGCAGCGGATGAATGTGAAGagcagaagaggaagaggatggaAGCAGAGCGGTTAGCGCGAGACTTCCAGAAGCTCTGCGAGAAACAGGCAGACGATTACAGGACCACTGTCGGCAGCCTCCAGGTGGAGATCAGAGATTTAGTAAAGAAGTTGCGAGAGCTCGAGGCACAGGACGTGGAAAGACAATGTGACAAACACCTGAAGCAGgtGTGTTCTCTGGAGAGTGAAGTTTGCCGGCTGAAGGCTGTCCTTCAGGAGGAGCAGCAGAAGACCGGGCAGCTGTCCATGACCATGCAGATGGAAATTGACCAGGCTAGAGCTTTGGTACAGTCACAGAACGTCCGGCTTCAGCTGGACACAGAAGAGCAGAAAAAGATGTTTGAGGAGCTGCAGGGCATCCAGAACATCCTCAGCTCCACCAAACAAGAGCTGCTGTCCCAGAGGAGAAACAACACACGACTGCAAGACCACATCACTGACGCCCAGCAGGAACACCTCAGGCTCCAACAAAACATCGAGGACTTGAGGAACAGACTAACCAGCGGTCAACAGGAAACTGACTCTCTGAGGACAGAGCTTCAGCTAGCTCTAGTTAGCGTGGATGCTGAGAGGAGtaaaTACAACGACAAGCGAATTCACTACAAAAACAAGCTGAGCCGTGCCAGAGGCCTTTACCTGAGAGAGACAGGGTGGCgggatgaaaaaataaaagactcGGAGAAggagattttcattttaaggaaACAGGAGGAAAAGACGTCACACATGATGAAGATGGTCACGTCCGAAAATGAGAGTCTGCTTCAGAAGAACAGAGAGCTTCTTTTGCAGTTGAATGACTTTGAAGAGACACAGAAAAATGCTTCGGAGGCAGTTACCTCGATGCAGATGAGGATAAATTTGCTCGAAGAAGAGAATATTCAGCTCCAAGAGACAACAGCAGAAATGTCGGAGCACATCGAGTGCCTGGCGATACTGGCCGAGACGAACTGCGACgaAGTCACCGCTGAGAGTCGTGTCATAGAGGGCGAAGACCAAGCTACTCTGcctacataaatatatatatatataaattatatatatacatatatataaaa
>XM_043251442.1
ccacatacacacacacacacacacacacacacacacacgctcgacCTGATGAACGTGAATTCCGCGCAAATGCTATACAATACTTATAGCGTTTCATTATAACGTGCGTTTCTAGGCGACCGTAAAAGTTCGGTTAGGACTCCACATGAAAAACAGTCCGTTTGAATTCACTGCAGCAGAGTTTGGACAAGCGAcgccgtgtgtgtgtttacgttCAAAACAATAACCTAAAAcgatttaagtatttaaatggtTCTGAATAACGTCGAGAAATGTGCACAGCACAGATGGTGCAGGACATGGATCAACTGCTGCAGGAGGAAGGGTTGGACTCCTCGGCCTCCAGCAACGAGCGTTTATCTCTGCTGTGGCAGCTTTACATGAAAAGTGAAAGTACCGTGAGATCCCTCAACCAACAGATACAAGATCTGCAGAAGGAACGTGTTGCTGAGATTGAAAAGGTTCAGCAATACATTAATCACATTAAGAGTCTCACAAAGACCCGAGACTCTGTGGCTTTACATCTCgagcaagaaaacaaaatgctcCATGCAACTCTGGAGGACATCCATCGGCAACAAGAAGCACAGCGGAGTGAGATCTCTGAGATGTTACTCCAGGAAGGTCTGGCTGATATTATTTGCATCGGCTTGAGTGAACAGGTGGCTTACCTCCTCGCAGACAGAGCCTCCCTGTTGGAGAAAATACAAACTCAGGAGAACGTGGATGTGAAGACGGCAGAGGACCCTGATGTCCATAAGGAGGATTGTAGAGCGAATGTGGTCAAAGTGACAGCACCGCACGCTCAGAGCCCTTGGAAGAGGCTCCTAGGACTCAGAAAGGCTGCTCAGAGTAAACCCAAATTACTGCCTGCCGCTGACCTGCAGTGCAGTGCCGATGACAAACTGAAGGGGCGGATGTTGCTAGAACTGGAGCGAGATGTGGAAGAGGCATCTGCTCGACTCGACATGGCCCACAAAGAGATCCGCAGACTCACAGATGAGCTTGAGTCGGCTCACCTGACACAAAGGGCTTATGAACCAGAGCTGCAAGAAGCTCAAATGGAAGTTGCTCATCTGCGCCATGAAGTGGAGAAACTGAAATGTTGTGTTGCTGAGTTAcgaaaaataaaagagatgaACGAGAAACAGGAAGAAGAGCTGTGCCGCCTTAGGGAGACTGTGAAGAGGCTACAGGCAGAGCCCGAAAAGTTGTTTGAAATGACAGAAGCCCCTGACAGAACCAGcacttcacccaaaaacaagAAGCCTCAGGAAGAAGATATCCATAAACGGTGCTTTGATGAGATGCAGGAGAGGTTGCACGTGCTGCAAGACCTGACCCAGGTCACGCTGAAGCTGCGGATGGAGTATGAGATGGAGGCTGACCTGCGCAGAAGGGCAGCGGATGAATGTGAAGagcagaagaggaagaggatggaAGCAGAGCGGTTAGCGCGAGACTTCCAGAAGCTCTGCGAGAAACAGGCAGACGATTACAGGACCACTGTCGGCAGCCTCCAGGTGGAGATCAGAGATTTAGTAAAGAAGTTGCGAGAGCTCGAGGCACAGGACGTGGAAAGACAATGTGACAAACACCTGAAGCAGgtGTGTTCTCTGGAGAGTGAAGTTTGCCGGCTGAAGGCTGTCCTTCAGGAGGAGCAGCAGAAGACCGGGCAGCTGTCCATGACCATGCAGATGGAAATTGACCAGGCTAGAGCTTTGGTACAGTCACAGAACGTCCGGCTTCAGCTGGACACAGAAGAGCAGAAAAAGATGTTTGAGGAGCTGCAGGGCATCCAGAACATCCTCAGCTCCACCAAACAAGAGCTGCTGTCCCAGAGGAGAAACAACACACGACTGCAAGACCACATCACTGACGCCCAGCAGGAACACCTCAGGCTCCAACAAAACATCGAGGACTTGAGGAACAGACTAACCAGCGGTCAACAGGAAACTGACTCTCTGAGGACAGAGCTTCAGCTAGCTCTAGTTAGCGTGGATGCTGAGAGGAGtaaaTACAACGACAAGCGAATTCACTACAAAAACAAGCTGAGCCGTGCCAGAGGCCTTTACCTGAGAGAGACAGGGTGGCgggatgaaaaaataaaagactcGGAGAAggagattttcattttaaggaaACAGGAGGAAAAGACGTCACACATGATGAAGATGGTCACGTCCGAAAATGAGAGTCTGCTTCAGAAGAACAGAGAGCTTCTTTTGCAGTTGAATGACTTTGAAGAGACACAGAAAAATGCTTCGGAGGCAGTTACCTCGATGCAGATGAGGATAAATTTGCTCGAAGAAGAGAATATTCAGCTCCAAGAGACAACAGCAGAAATGTCGGAGCACATCGAGTGCCTGGCGATACTGGCCGAGACGAACTGCGACgaAGTCACCGCTGAGAGTCGTGTCATAGAGGGCGAAGACCAAGCTACTCTGcctacataaatatatatatatataaattatatatatacatatatataaaa
>XM_043251443.1
acatacacacacacacacacacacacacacacacacgctcgacCTGATGAACGTGAATTCCGCGCAAATGCTATACAATACTTATAGCGTTTCATTATAACGTGCGTTTCTAGGCGACCGTAAAAGTTCGGTTAGGACTCCACATGAAAAACAGTCCGTTTGAATTCACTGCAGCAGAGTTTGGACAAGCGAcgccgtgtgtgtgtttacgttCAAAACAATAACCTAAAAcgatttaagtatttaaatggtTCTGAATAACGTCGAGAAATGTGCACAGCACAGATGGTGCAGGACATGGATCAACTGCTGCAGGAGGAAGGGTTGGACTCCTCGGCCTCCAGCAACGAGCGTTTATCTCTGCTGTGGCAGCTTTACATGAAAAGTGAAAGTACCGTGAGATCCCTCAACCAACAGATACAAGATCTGCAGAAGGAACGTGTTGCTGAGATTGAAAAGGTTCAGCAATACATTAATCACATTAAGAGTCTCACAAAGACCCGAGACTCTGTGGCTTTACATCTCgagcaagaaaacaaaatgctcCATGCAACTCTGGAGGACATCCATCGGCAACAAGAAGCACAGCGGAGTGAGATCTCTGAGATGTTACTCCAGGAAGGTCTGGCTGATATTATTTGCATCGGCTTGAGTGAACAGGTGGCTTACCTCCTCGCAGACAGAGCCTCCCTGTTGGAGAAAATACAAACTCAGGAGAACGTGGATGTGAAGACGGCAGAGGACCCTGATGTCCATAAGGAGGATTGTAGAGCGAATGTGGTCAAAGCCGCTGACCTGCAGTGCAGTGCCGATGACAAACTGAAGGGGCGGATGTTGCTAGAACTGGAGCGAGATGTGGAAGAGGCATCTGCTCGACTCGACATGGCCCACAAAGAGATCCGCAGACTCACAGATGAGCTTGAGTCGGCTCACCTGACACAAAGGGCTTATGAACCAGAGCTGCAAGAAGCTCAAATGGAAGTTGCTCATCTGCGCCATGAAGTGGAGAAACTGAAATGTTGTGAAGTTGCTGAGTTAcgaaaaataaaagagatgaACGAGAAACAGGAAGAAGAGCTGTGCCGCCTTAGGGAGACTGTGAAGAGGCTACAGGCAGAGCCCGAAAAGTTGTTTGAAATGACAGAAGCCCCTGACAGAACCAGcacttcacccaaaaacaagAAGCCTCAGGAAGAAGATATCCATAAACGGTGCTTTGATGAGATGCAGGAGAGGTTGCACGTGCTGCAAGACCTGACCCAGGTCACGCTGAAGCTGCGGATGGAGTATGAGATGGAGGCTGACCTGCGCAGAAGGGCAGCGGATGAATGTGAAGagcagaagaggaagaggatggaAGCAGAGCGGTTAGCGCGAGACTTCCAGAAGCTCTGCGAGAAACAGGCAGACGATTACAGGACCACTGTCGGCAGCCTCCAGGTGGAGATCAGAGATTTAGTAAAGAAGTTGCGAGAGCTCGAGGCACAGGACGTGGAAAGACAATGTGACAAACACCTGAAGCAGgtGTGTTCTCTGGAGAGTGAAGTTTGCCGGCTGAAGGCTGTCCTTCAGGAGGAGCAGCAGAAGACCGGGCAGCTGTCCATGACCATGCAGATGGAAATTGACCAGGCTAGAGCTTTGGTACAGTCACAGAACGTCCGGCTTCAGCTGGACACAGAAGAGCAGAAAAAGATGTTTGAGGAGCTGCAGGGCATCCAGAACATCCTCAGCTCCACCAAACAAGAGCTGCTGTCCCAGAGGAGAAACAACACACGACTGCAAGACCACATCACTGACGCCCAGCAGGAACACCTCAGGCTCCAACAAAACATCGAGGACTTGAGGAACAGACTAACCAGCGGTCAACAGGAAACTGACTCTCTGAGGACAGAGCTTCAGCTAGCTCTAGTTAGCGTGGATGCTGAGAGGAGtaaaTACAACGACAAGCGAATTCACTACAAAAACAAGCTGAGCCGTGCCAGAGGCCTTTACCTGAGAGAGACAGGGTGGCgggatgaaaaaataaaagactcGGAGAAggagattttcattttaaggaaACAGGAGGAAAAGACGTCACACATGATGAAGATGGTCACGTCCGAAAATGAGAGTCTGCTTCAGAAGAACAGAGAGCTTCTTTTGCAGTTGAATGACTTTGAAGAGACACAGAAAAATGCTTCGGAGGCAGTTACCTCGATGCAGATGAGGATAAATTTGCTCGAAGAAGAGAATATTCAGCTCCAAGAGACAACAGCAGAAATGTCGGAGCACATCGAGTGCCTGGCGATACTGGCCGAGACGAACTGCGACgaAGTCACCGCTGAGAGTCGTGTCATAGAGGGCGAAGACCAAGCTACTCTGcctacataaatatatatatatataaattatatatatacatatatataaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251441.1 True 2499 mRNA 0.48 18 5887765 5896214
XM_043251442.1 False 2497 mRNA 0.48 18 5887765 5896215
XM_043251443.1 False 2414 mRNA 0.48 17 5887765 5896213

Neighbor

gene id symbol gene type direction distance location
LOC122353621 LOC107756649,LOC107592864,LOC107654397 coding downstream 19690 5861347 ~ 5868075 (-)
slc45a1 slc45a1,LOC107702000,LOC107654425 coding downstream 162391 5711807 ~ 5725374 (-)
errfi1a errfi1,LOC107701998,LOC107756659,LOC107592857,LOC107736087,LOC107654423,LOC107579142 coding downstream 243744 5636129 ~ 5644021 (-)
pax7a pax7a,pax7,LOC107582416 coding downstream 340750 5492751 ~ 5547015 (-)
kcnab2a kcnab2a,LOC107592856,LOC107712982,LOC107657983,LOC107582417,LOC108431628,LOC108255041 coding downstream 505237 5353659 ~ 5382528 (-)
ccdc50b LOC107592910,LOC107756624,LOC107751234,LOC107654367,LOC107654434 coding upstream 20781 5916996 ~ 5931484 (-)
per3 per3,LOC107751173,LOC107756610,LOC107582444 coding upstream 922317 6818532 ~ 6838832 (-)
camta1b LOC107751174,LOC107654393,LOC107756644,LOC107654440,LOC107582404 coding upstream 952774 6848989 ~ 7121128 (-)
cdc42 cdc42,LOC107083933,LOC103386293,LOC100697482,LOC108435227,LOC103465423,LOC100691174,LOC101164400,LOC108248645 coding upstream 1376627 7272842 ~ 7286099 (-)
c11h1orf50 zgc:112255,cunh1orf50,LOC107756638,LOC107654365,LOC107654415,LOC107565729,LOC107582467,LOC107751182 coding upstream 1394395 7290610 ~ 7294450 (-)
G79530 NA non-coding downstream 29523 5857965 ~ 5858242 (-)
G79490 LOC107592861,LOC107702006,LOC107756656,LOC107582474,LOC107712957,LOC107654430 non-coding downstream 93535 5792970 ~ 5794230 (-)
G79472 fam213b,LOC107756615,LOC107702003,LOC107592888,LOC107582414,LOC107712975,LOC107654427 non-coding downstream 158707 5727444 ~ 5729058 (-)
G79454 NA non-coding downstream 177058 5708994 ~ 5710707 (-)
G79361 NA non-coding downstream 647053 5239514 ~ 5240712 (-)
LOC122353630 NA non-coding upstream 38689 5934904 ~ 5936532 (-)
LOC122353631 NA non-coding upstream 41056 5937271 ~ 5941950 (-)
LOC122353632 NA non-coding upstream 178061 6074276 ~ 6074960 (-)
G79562 NA non-coding upstream 179548 6075763 ~ 6076391 (-)
G79570 NA non-coding upstream 297616 6193831 ~ 6194923 (-)
mmel1 mmel1,LOC107712974,LOC107756657,LOC107654428,LOC107702001,LOC107592889 other downstream 122625 5739016 ~ 5765140 (-)
si:dkey-197i20.6 si:dkey-197i20.6,LOC107745350,LOC107710445,LOC107658773,LOC107669007,LOC107592569 other downstream 1921974 3961981 ~ 3965791 (-)
G79085 zgc:113223,LOC107745344,LOC107698001,LOC107556176 other downstream 1973130 3913248 ~ 3914635 (-)
LOC122354343 cpne5b,LOC107680428,LOC107714485,LOC107555996,LOC107699334,LOC107751002,LOC108436414 other downstream 2052842 3813505 ~ 3834923 (-)
G79003 NA other downstream 2346710 3540001 ~ 3541055 (-)
G79565 NA other upstream 199918 6096133 ~ 6096480 (-)
vamp3 vamp3 other upstream 917410 6813625 ~ 6847790 (-)
phf13 LOC107756642,LOC107751178,LOC107582403 other upstream 1235363 7131578 ~ 7141236 (-)
LOC122354641 svbp other upstream 1257250 7153465 ~ 7155275 (-)
LOC122354401 epha8,LOC107756634,LOC107565732,LOC107654383,LOC107582396,LOC107654448 other upstream 1472157 7368372 ~ 7436471 (-)

Expression


Co-expression Network