LOC122353860 (LOC107741998,LOC107558372,LOC107713002,LOC107694486,LOC107552402,LOC101887111,LOC107657945)


Basic Information

Item Value
gene id LOC122353860
gene name LOC107741998,LOC107558372,LOC107713002,LOC107694486,LOC107552402,LOC101887111,LOC107657945
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12150736 ~ 12161843 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251750.1
GGGGCGCTGTTTCACAACTTTAAACTTCATCAGTAAATCCATATCGGTCCTAAAACGCAGGAATATTTATTGAcatgaaactaaaacaaatcGTATTTTccaaagtattttattatacacacataaaaccccttttcatatttttatattttaaaatatctgctATGGGGGTTTTAGATGTCGAGataaagtcatattttttttgtttagtttttttttttttttttttggagagccAGTTAGTGATCTGGTTAGCTGGTCGTAACCAGTTTACGAGTTCACACGTTCATTCACTCAAACCAGTTAAAAAGTTGAGCTCATCTGCTTTCCACGACTAAAACCTACCGCCTGTAAACGCTTTCATCCAAAGGGGATGCTCGGTCTTTTCCACACCCACATTTCTGTAAACAGGAATAGCTGACCTTGAAAATAGCGCATTATCACCCGAAAGCGTGTCTTTTGTCATCTGTAGCaaatttaaagtgtattttctcTTGTTGATGCTAATTAAATCAACCCGGGCCACCGCACAGCGCACAATGAACACGTTTCATGCACTTTACGCattctatatattatttctaaaatgcatcTGGCGTGTAAATTCGCATTTGAGCTACTTTTAACTCTCGGTAATAGCGATCCCTGTTGATGAACGCTTCTTATAACGCGCGCTTTCCTCATGCGCACCGAACCGTCGCGTGGGTCCCGGCACAAACCCCTCAAGTTTTATAATCCCGGAGTCGCTGGCTCGTCCCACGTGGTTCCCCGGTCCCGTATAAAAACTTTCCAGAGGCTCAAAAGCGGCATAATGTCCGTTCGCACGAGAAACGAGCCGaacgcgcgcgcacgcacgcacacacgcacgcacgcacgcactcGCCGAGAGCTATGATGAAGAAGTACATGGGAAGCGTACACTGGAAGTCAAAATGCCCAACAAAGGAGGACGCGGTTGTCGTCTGAAGAACTGAAAAAGGTCGTTTGGAAATACCCCGCGCGCTCCCGATCACCATGGATGATTTTAACTCGGCAGAGTGAAGAAATCGCCGGGACAAATCATAACAGGTCCTTTGTTTAGTCTGTGGGGTTTTACACGCGCAACACCGAGATTTCCAGTCATGCCATGACGCATCAGACGCGTGCGTAAAAGTGCCATTCGCCGCCGAGCGTGGACAGACATCGAGAGCCCTGCTTACTTTATTATTTGCAAACCTCGCGTTTAGCAACTCCGAGAGATTCTGATGGTGCGCGGAGCCGTGATACCGATCCGAGTTGTGTTGAAATCGCGGCGGGGTGACCAAAGACAAGAATCGGCCGCGGGGACGTGTTCCGGGATTTACCGCGTTTGCGTTTAATTCGGAACCCGGAGAGTGGATTTAACGCCCTCAAGTCTCACTTTCCCTGTTTTTATTCGGGAGGAAAAAGCAGGCGGACACGAACTTGGCCGCTTTCGTCTCCATCGACCCCGCTCACCATCACGGAAGATGAAAAGCTTGATATTCGAAGTGCTTTGTTTTGCGTCCGTCCTCGTCTCCATCCGCTGCACCCCGGCGCCGGGCACCGAAACCCCGAGCGTCAGCCCGAGCTGCGCGTCCTGCGGGCTCGGCCAGGCGGACGGAGGCGCCCTGGTGGACGTGGATCTGTTGGAGGCGGTGAAGAGACACATCCTGAGCCGCTTGCAGATGCGGGACAGACCCAACATCACCCACCCCATCCCGAAGGCGGCGATGGTGACCGCGCTCAAGAAGCTCCACGCCGGCAAGGTGCGCGAGGACGGGAGGGTGGAGATCCCCAACCTGGACGGGCACGCCGCGTCCGTGAacgaggtggaggaggagacctCGGAGATCATCAGCTTCGCCGAGACAGACGAATCGCTGACCTCCAAAACCAGCCTGTTTTTCGTGATCTCCAACGAGGGCAACCAGAACCTGTACGTGTCCCAGGCCAGCCTGTGGCTGTACTTCAAGCTTCTGCCTAACGTCCTGGAGAAAGGCTCGAGGAGGAAGGTCACGGTGAAGGTGTACTCGCAGGAACCGGGGCTCGGGAGCAAGTGGAACTTGGTGGAGAAGCGCGTGGACCTCAAGCGCAGCGGGTGGCACACGTTTCCGCTGACGGACGCCGTGCAGATGGTTTTCGCCAAAGGAGATCGCCGGCAGAACCTGGACGTGCGGTGCGAGGCGTGCGAGAAGATGGGCGTCGTGCCTATTTTGGTGAACACGGCCGACGAATCCCACCGCCCGTTCCTCGTGGTCCAAGCGCGGGCGGCCGACAACAAGCACCGCATCCGCAAGCGAGGCCTCGAATGCGACGGCAGCAGCAGTTTGTGTTGCCGCCAACAGTTTTACATCGACTTCCGCCTCATCGGCTGGAACGACTGGATCATCGCCCCGTCGGGCTACTTTGGGAATTATTGCGAAGGGAACTGCCCGGCGTACATGGCCGGGGTTCCCGGATCGGCTTCGTCTTTCCACACGGCCGTCGTGAACCAATACCGCATGCGAGGAATGAGTCCGGGATCCATGAACTCCTGCTGCATCCCGACCAAACTCAGCACCATGTCCATGCTGTACTTCGACGACGAATACAACATCGTGAAACGGGACGTGCCCAACATGATCGTCGAGGAGTGCGGCTGCGCTTGAGATAGTAAGAAACTAATATTTATGACTCATCCGTGCTCACAGGCCCACACGCACACCCCAACTCTTCCACGCATCtttgtacatatatttatgttcttTAATCATCGCGCGATTTAGTTCCAGGTTTGTACGATACTGTCACTTCAAAGGGATGGGATTGCTTTTATCTCTGTTTACgctcttaaaaacaaaggtaCGGTCATGCATtagacaaaatgttctttagatGACtataatgttcttttaaagggacagttcttGCTGTTAATGCACTCAACCTcgggccatccaagatgcaAGTGGCTTTATTCTTCAGCGGAGCAGCGTTTTTAGCAGAAACCGTGGTCTTTGGTCATAAGACGCGAATCACTTTGAGAATGAAAAAAGCATGTACAAGCAAAGCAACATTAATACCCGTATATTGAGGTGTTATGAAGTGAAATGatcagtctgtgcaagaaacttgTAATCCAGAACCTCAGGGAAAACTGGGAAATCCGATTCTTCATAAACTGGTTCGTTTCAATGAAATGATTCAGTTCACTAGTTCAGTTACGCAGTGATGCAATGACGTCACATATACGACATGATATTATCAAAGCACCCGATAATGATGTGAGCTTTGCATGTCTAAAGCGTATAAAGTGAATAAACTAGTTTTCACCAGCTCAACTTTTGACATGAGCAATGAGAAATCACATACCCTTCATTCAAGTGTTTGATTCATGCATATACATGCCTGCGACCCATCAGTCTTTGAGTCTTTGAGTCTGAGTCGAACTGTTTTTTCAGTTCAGTGAGCTCCGAATCAGTTCATTCATGACAGGATCAGATAAAGCACTATTTCAGCTCGTTTTGAGTCGGACTGACCGTCCGGCATCTGAAAGTGAGCTTTGGTTGAACTTTAGCTAGTTCAACCCGGGGAACTGATTCACTGAAATGAACCTCTTCAAAAGAATCGTGCATTTTTGAACTTGACATTGCTTTGGAACGTTTGCCCGAGAAAGTAATAATGTAgtaaataatgttcagtttcttgcacagactgatTGTTTTGATTCATAAGACCACGGGTATTAGTTTTGCTTTGCTTGATATGCCTTTTTTATTCTCTAAAATGGGCAGCCATCTGCATTGCGTGAATCATGCATCAAGGACCGTGGTTTCAGCTAAACATTTTAAGAGCAAAAGCCACCTACATCTAGGATGGCCAGAAGGTGAGTGAATTAACAtcacgtttttatttttgggtgagctatccctttaagaactgGTGACTGAAAGATTTTAGGGCAACCAAAAACGGTTCTCTaagaaacctttatttttaagagtgcagtTCGGTTCTTCTCTTTAAAAATGGAAAGAGGAGGGGTGATCTTCTCAAAAGACTTTTATATCCGTATACCTTCCCGAAAAGCACTGACCATCTTCTCAAAGCAACGCCAGCACTTCCCACATTGAGTCCATCGAGTGACAACCAATCCATTCGTCTTCAACGGACATCTGCAAAGAGCTACAACAATCCTCGTTCCTCGAGAGACACGAGACCCGCTCATAAATCACGAGgcgtgttttgtgtttgttcatgaAGACACGCTTCAAGCGAAATCCAGTGGTCTCACGAATTGCCAAACTCTCCAGTTACGTCATGGTGCAGCATAGCACttgcaaaaaatattgaaaatgcacAATACAAAGCACTTGCAGACTTAAAAATGCCTTTGAAGGTACCAAGTGGCGCGCCTCGTTCACGATTCCTCTGAAATAAGTGCCGCACAAGCTATGCAATGTATAGTAGTGACCTACACCGGATGACCCGCTTGTTAAGAACTGTTTTCAATACTTGAAATGTAAACTTTCGCTTCCTACTCTGAGCGGATGGTTGTTACAATGTTTGCACTGAAGCTGCATTATTAGTAAAGAACAAACCtgccattgaaaaaaaaaaaaaaaaaagttatttttatagaagCTGAAGCTGAATTCTGTTCAAATGTATTATACCGAATTATGGAACCAAAGAGGCCAAGATTTTAGCTATTGTGAGATGGCAAGGCCATCGGATTCTtttgtaaaatactttttaaatgcgCAAGAGGCCTAAACAATGTATCAGGGTACAACAGAATGGATTCCATTTTCAAGTTGTTGTTTTGTACAGTAGATAAACggaatatttcatatttttccatcaactttgttttggtttttttttcagttttctatttaataattctgtAGCGTCTATTACGGAATCATTTAGAGTCAAATACATGCCATCTCTGTACAGCTTATGTaagataaaaatgcttttaaatattttgttctttgtaACTGTTATGAAATAAATTTCTTATACTGCA

Function

NR:

description
PREDICTED: inhibin beta B chain-like, partial

GO: NA

KEGG:

id description
K22687 INHBB; inhibin beta B chain

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251750.1 True 5014 mRNA 0.46 2 12150736 12161843

Neighbor

gene id symbol gene type direction distance location
gli2b gli2b,LOC107741990,LOC107552403,LOC107558373,LOC107701691,LOC107755624 coding downstream 91420 11982436 ~ 12059316 (-)
LOC122354705 NA coding downstream 249638 11900968 ~ 11901098 (-)
traf3ip2b LOC107558361 coding downstream 258544 11884558 ~ 11892192 (-)
LOC122353870 LOC107661166 coding downstream 291581 11856339 ~ 11859155 (-)
gnb4b gnb4,LOC107701549,LOC107552407,LOC108270972 coding downstream 327945 11812570 ~ 11822791 (-)
LOC122353880 NA coding upstream 7625 12169468 ~ 12171898 (-)
foxg1b LOC107744583,LOC107680495,LOC107552399,LOC107657967,LOC107712998 coding upstream 183696 12345539 ~ 12347685 (-)
tdrd3 tdrd3,LOC107712996,LOC107747549,LOC107680523,LOC107557396,LOC107597179 coding upstream 415176 12577019 ~ 12594787 (-)
LOC122353872 NA coding upstream 441823 12603666 ~ 12604703 (-)
zgc:194981 NA coding upstream 445393 12607236 ~ 12609732 (-)
G81165 NA non-coding downstream 195666 11898871 ~ 11955070 (-)
G81174 NA non-coding downstream 209851 11939282 ~ 11940885 (-)
G81171 NA non-coding downstream 212308 11934065 ~ 11938428 (-)
G81158 clcn4,LOC107552404,LOC107705120,LOC107702352,LOC107558374,LOC107740070,LOC106517624,LOC104959943 non-coding downstream 273087 11875488 ~ 11877649 (-)
G81097 NA non-coding downstream 363748 11784280 ~ 11786988 (-)
G81233 NA non-coding upstream 72556 12234399 ~ 12234936 (-)
G81235 NA non-coding upstream 73759 12235602 ~ 12236175 (-)
G81237 NA non-coding upstream 75966 12237809 ~ 12238334 (-)
G81295 NA non-coding upstream 208697 12370540 ~ 12372623 (-)
G81327 NA non-coding upstream 321400 12483243 ~ 12523584 (-)
G81192 NA other downstream 76661 12073596 ~ 12074075 (-)
ero1b ero1b other downstream 369927 11766831 ~ 11780809 (-)
strn strn,LOC107702041,LOC107701064,LOC108430145,LOC107713228,LOC108271087 other downstream 519049 11536500 ~ 11631687 (-)
G80956 NA other downstream 731406 11403644 ~ 11419330 (-)
LOC122354635 NA other downstream 755860 11390592 ~ 11394876 (-)
G81318 NA other upstream 284017 12445860 ~ 12447287 (-)
hesx1 hesx1,LOC107712966,LOC107657957,LOC107557393,LOC107680467 other upstream 501988 12663831 ~ 12667588 (-)
G81512 NA other upstream 655910 12817753 ~ 13057881 (-)
G81523 NA other upstream 728438 12890281 ~ 12896130 (-)
LOC122353859 NA other upstream 795018 12956861 ~ 12965633 (-)

Expression


Co-expression Network