LOC122353872


Basic Information

Item Value
gene id LOC122353872
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12603666 ~ 12604703 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251763.1
GGATCATCGCAGAGTATATGGTCGTTTTTGGAGAAGACGTCTGGAGGCACGCCGTGGTTTTGTTCACGTGGGGCGACAGGTTTCCAGACGTCTCGGTCGAGCAGCACATTGAGAGCGAAGGAGAAGCTCTTCGGTGGCTGATTCAGAAATGCAGGAACAGGTACCACGTCTTTGACAACGCAGACGAGACCAACCGAGATCAAGTCCCCGAGCTGCTCCGGAAGATTGACGAGATGGTGGCAGAAAACAGTCTGTTCTGTCTCGACCCTCAAGAAGAAGACCTTCTTGAGGCCGACACGCAGCGAGAAGAAGAAATAAGCCTGGATGCCGAGCTCGTGCTGCAGCTACTGCAGCAAGAGATTATAAAGAGGTTTATGGGTATCCAGAGTCGACTGAAGCACTCAGGGATGGACTTCACTGGATGTGCAGAGAGCAGAAGTCACCGTAGCATTTCAGACCCTCCTAGCCtgtcAGCTGATGAGAAACTCAGGGAAAAGATGAGGAGAGAAGGAAGCAGATGGGAGGTAACTTTAATGGACACGTTTTCGAAGGATCGGATTTGCGAAGCATCGTCCGATTTCCACGAGAAGGTGATGGGGTGGCTGCAAAGATGTGATGAATACAGCTCGGTTGGATATGGATCAAGCTCCAGCATCAGCAGCTGAGAAGATCCAGAGGCCAGAGGCAAGACATTAAAAGCAGTTTACAGAATACAGCACTCCGTTCAAACGTGTTTCTTAGTTTTGAAcgtgtttaataatatttctaacgAATGATTTGCGTTATTGCATGCTATCCAAAAACTATATGACTATTATttcatgaaaattaaaagtaacCTAAACTTGAAA

Function

GO:

id name namespace
GO:0042116 macrophage activation biological_process
GO:0002274 myeloid leukocyte activation biological_process
GO:0002376 immune system process biological_process
GO:0045321 leukocyte activation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251763.1 True 851 mRNA 0.47 3 12603666 12604703

Neighbor

gene id symbol gene type direction distance location
tdrd3 tdrd3,LOC107712996,LOC107747549,LOC107680523,LOC107557396,LOC107597179 coding downstream 8879 12577019 ~ 12594787 (-)
foxg1b LOC107744583,LOC107680495,LOC107552399,LOC107657967,LOC107712998 coding downstream 255981 12345539 ~ 12347685 (-)
LOC122353880 NA coding downstream 431768 12169468 ~ 12171898 (-)
LOC122353860 LOC107741998,LOC107558372,LOC107713002,LOC107694486,LOC107552402,LOC101887111,LOC107657945 coding downstream 441823 12150736 ~ 12161843 (-)
gli2b gli2b,LOC107741990,LOC107552403,LOC107558373,LOC107701691,LOC107755624 coding downstream 544350 11982436 ~ 12059316 (-)
zgc:194981 NA coding upstream 2533 12607236 ~ 12609732 (-)
il17rd il17rd,LOC107680557,LOC107597177,LOC107657971,LOC107557418 coding upstream 8121 12612824 ~ 12659684 (-)
appl1 appl1,LOC107712995 coding upstream 66464 12671167 ~ 12684887 (-)
asb14a asb14,LOC107680484 coding upstream 80520 12685223 ~ 12695730 (-)
rps23 rps23,rs23,LOC107680479,LOC106566095 coding upstream 95524 12700227 ~ 12701654 (-)
G81353 NA non-coding downstream 28553 12574863 ~ 12575113 (-)
G81350 NA non-coding downstream 35357 12568109 ~ 12568309 (-)
G81349 NA non-coding downstream 68240 12534950 ~ 12535426 (-)
G81327 NA non-coding downstream 80082 12483243 ~ 12523584 (-)
LOC122353897 NA non-coding upstream 105703 12710406 ~ 12715974 (-)
G81514 NA non-coding upstream 262975 12867678 ~ 12870246 (-)
G81522 NA non-coding upstream 284225 12888928 ~ 12890216 (-)
G81524 NA non-coding upstream 289236 12893939 ~ 12895846 (-)
G81528 NA non-coding upstream 361093 12965796 ~ 12998617 (-)
G81318 NA other downstream 156379 12445860 ~ 12447287 (-)
G81192 NA other downstream 529591 12073596 ~ 12074075 (-)
ero1b ero1b other downstream 822857 11766831 ~ 11780809 (-)
strn strn,LOC107702041,LOC107701064,LOC108430145,LOC107713228,LOC108271087 other downstream 971979 11536500 ~ 11631687 (-)
G80956 NA other downstream 1184336 11403644 ~ 11419330 (-)
hesx1 hesx1,LOC107712966,LOC107657957,LOC107557393,LOC107680467 other upstream 59128 12663831 ~ 12667588 (-)
G81512 NA other upstream 213050 12817753 ~ 13057881 (-)
G81523 NA other upstream 285578 12890281 ~ 12896130 (-)
LOC122353859 NA other upstream 352158 12956861 ~ 12965633 (-)
vipb LOC107557425,LOC107657966,LOC107680498,LOC107713001,LOC107741995,LOC107552401 other upstream 379670 12984373 ~ 12989957 (-)

Expression


Co-expression Network