hap1 (si:dkey-28e7.3,LOC107680538,LOC107674537,LOC107718874,LOC107753848,LOC107564818,LOC107562051)


Basic Information

Item Value
gene id hap1
gene name si:dkey-28e7.3,LOC107680538,LOC107674537,LOC107718874,LOC107753848,LOC107564818,LOC107562051
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15389066 ~ 15400192 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252790.1
GCCAGGTGAGTCTGAGCTGCAGTGACACACACTATCAGAAGATTCAGTAACAGCCTCGGCATGTGCAGCCTGGGAGCTTAAAGGAGCATTAGTGAGCAGATAGGAAAGCCTAGGGAACAGCAGCGGTGACTGGCAAAAGACAGGCTGGTCGTGTCATAAATCAGCCTGGCACTgtctgaggagagagagagagagagagagagagagagagagaaagagagaaagagagagagagagactcgaGACAGACCGCATTGCAGGGCAGACACACATAGCAGAGCATGAGTTCAGAAATGGAGGTGTGGAGCAGTTCGGGGATGGACGAGAGCGAAAGAGACAGCAGCACCAGTCATGATGAAGACGATGAAGAACCGGAGGACGAAGAGCAGCCCGACACTGAGGGTCTGTGCAGGGAGCTGGTGCAAGTGCTGTGTTCGGAGAGAGTTGGTCAAATCACAAAGACGTATCACGACATTGAGGCAGTTACACATCTGCTTGAGGAGAAAGAGCGTGACCTGGAATTAGCAGCCCGGATTGGCCAGTCGCTGCTCAAGCAGAATAAAACCCTGACTGAACGCAACAAACTACTGGACGAACAGCTGGAAATCACCAAGGAAGAGATTGCTCAGCTGCGCCATGAGCTCTCCATGAGAGACGATCTCCTGCACTTCTATGCCAGCACTGAAGATATAGAGCATGCCTCAGAAACGCTACTCATACGGAGTGATTCCTCCTCATCTCTCAGCAACTACATCAATTACGATTTGCTGCAACAGAAACTCAAGGGTTTAGAAGAGGAGAACTTCAAACTGCGCACAGAAgcaaACGAGTTAACATTTGAGACCAACAGTTATGAGGAACAAGAGCAACGGCTTATGATGGTGTGTGTGGATGAACTCTCTACAGCAAATAAACAGGTCGTATCTCTGTCGGAAGAATTAGCCCGGAAGGTGGAGGATTCACTAAGACAGCAAGAGGAGATTAGTGGCCTCCTGGGACAGATTGTTGATCTGGAGCAGCGCTGCAAAGGGCTCACTGCTGAGAACGAGGAGTTAACGCAACATCTCAGTGCTTCCCGGGAATCCCAGGCTCAGCTTAAAACAGAGCTGAAGGAACTGCAGGAGAGGTACTCTGAATGTGAAGACATGCTCCATGAGGCCAGAGAGGACATTAAGAACCTGCGCAATAAGAGTCTGCCCAACAGCACGGTCCAGCGATATAGCACTCTGGCATCCATCGTCCCAATGGATTCACTCGCTGCTGAGATTGAAGGAACCTTTCGGAAAGGACTAGACAGCCCAGCACCCACTGAATACAAGAATCATCCGTTGCGGGTGTTTGAGACCGTAAAGGTGGCAAATCAGGTGGCTCGGCTACGCTCCCAGATTCACTCTCCGCAGGTTCCGGGTTCGAGCTCTACATCACTACGCTCTAGTCGAATCAGTACACCACGGACCAGTTATTATGAATCAGACAATGTTAGTGTCAGCATGGAGGATAAGCACTCCCCCCCGACGCATACACAGGATCAAGGGTTGCTGGAGTCGAAGCGTTTGGGCCAGCCAGGTACTCCAGGTGGGCAGGATTTGGAGGAAGCGCTCCGGTCTCTCTCAGAGCGTCAGGAGAGCCACACGTCAGAGCGGCCGTTCTTCGAGGTGGAGAGGGAAAGGAAACTGCGGGCCCTGCAGAGCGGAAGCAGCGGCAGTGGAGACGGCTCCAGCGGCTTCCTGACTCCCAACGGCAGCGTGGCGTCCACAGGAACCAACTACTCCGGCACCTCCACGCATTCCTCCGGCACAGGATCGTCCCGCTCGTACCTGCCTGAACGCCTGCAGATAGTCAAGCCGCTGGAGGGCTCAGTGACCCTGCATCAATGGCAGCAGCTGGCCAAACCCAATCTCGGGGTCATCCTGCACCCACGGCCGGGTGTCCTCACCAAAGACTTCAGAGAGCTGGACGTGGACTTCCAACACGTCTACAGCCTCAATGACCTCGAGGAGGATGAGCCCGATCTGTCCAAATTCCCCAACCTCCTGAACGGCACCGTGGTCCCTTCATCAGGACCTAACATCCCTCAGACCTCACCCACACCTCCGACCACTAGCTGTCAGATCCTCCATCCCTCCGTCCTTCTCTCCTCCTTCTCCACCAGCCTTTGGCCCCGCAATGCATCCACTTGTGGGAGCTGTGAGCACGTGAGGACATCGTCAGGCCTCCAGTGCATCTCTGGGTCCACATCACACCTCCACCAGACCTCCTCCCTCGGTCTGCTACAGCTTGTATCAGAGCGCGGCATCTCGGCTGCAGTTCACCCCAACTCCCCTCTCCTTCACAGAGCCACCGCATCCTCGGTGGAAGCACAGCGGGGCTCTGACGGTAGTGAACAAGACAAAAGAGAAAAGGAATGGCAGGGAAACATTTTCAGTGTCAACCTCGTGGAAAAACTCAGAAGCCTGGGCCTGTACAAAGTGGTTGCCAGAGGCTTTGTGGATTTTGGTCGAAAAGAAAAACCAGGCCCACATGACACGTAAAAAGACGTTCACCGTTAAAGGTGCATCACCCTCATTGTGGCATGCAGCTAAACTTTTCCCGTTTGTAACGGGACGTTCCGAAAGCCATATccagtttttatttctgtagtgACTACTTATTGGCACTGGGAATTTTAAGTGTGGACTGCACCTCGATTTCATTATGAAGTCAAACACGTCTGTGTTTATATCATTGTTGTCGTAGGGAGTTTTAAACGCCCTTCAGAAGGGAACAGCTGTACATTTGTCGAATTTTTAACGTCCTCTTTTGTTGAGACTTTGTCACTATCCAATcactgttttactgttatgaAATTGTAGCAGCACTACAGAAAAATGCACTATGTGGCCTGAATTTTTGCTTGCTGCCAAGCAAGCATCGGTGTCAGTAGTGCGTTTTGCttcctgacaaaaaaaacatttgttcataATAGCACTTTTCAGGGCATTAAAATCCCTTTTTCGGGAAATGCAGGATACATTATGTGAGGTTATGTACTGTACCTGCAGtctaaacactgtaaaaatgaaaagctgtatTTATGCTGACTGTCGGTGGTCAGTTTACGAAACATACCGTCTTGTTAAATGAATAGAAGTGATCTTGTGCTTTATTTTCACTGTGCTTTAAAGAAAGAACTCCTCATGAGATGGTACACCTTGCACACATGTATGTAATGAAACTTTAACTCCACGGACACGTTTTCACTTTAAGGTTTTTAATGTATATGATTGTGTTTCGCAAGAATCAGGGATGCAGTAATGAAGTGCTCTAGAGCCGTAAGTACACGATCTGGTAATTCTAACACTGAGTCTTCTAGGGATGAACTTGTATCGCAGGATTATTCATTGAACActgctttgtttctttttctcaccGTCAACATATTCCATTGCGTCCACTTGTGTTTGTCAACCAAGTGAGcagaaataaagtaatatatctGTATATGGAGAAAGCCTTGTATGCgtttgaaatattcaaatggGCATGATGAGGTGTAGCATTTACTGGTCTAAAGTCTCAgacaaaattgttatttataaagtaatatatttcaataaaaatatctacCTGAAATTCCACtctgcataaaaacacaatgcgtcatttaaaaaagaaaaagaaaaaaaaaaaaaaaaaaagtaattatataaaGCATTGTTCATTTACACAAGGATGAGATGTTAAAAAACAGagtaataattgtattttttacatgaGAACAATGTTTAGACACTGTAGCTTCACAGTTAATTAAAAGCCCACGAGTTCACCAAGTGTTTCAGGCACTCATACTGTGTTAAATAGCAATAAAGATTTCAGTATATTTCTGa
>XM_043252791.1
CCAGGTGAGTCTGAGCTGCAGTGACACACACTATCAGAAGATTCAGTAACAGCCTCGGCATGTGCAGCCTGGGAGCTTAAAGGAGCATTAGTGAGCAGATAGGAAAGCCTAGGGAACAGCAGCGGTGACTGGCAAAAGACAGGCTGGTCGTGTCATAAATCAGCCTGGCACTgtctgaggagagagagagagagagagagagagagagagagaaagagagaaagagagagagagagactcgaGACAGACCGCATTGCAGGGCAGACACACATAGCAGAGCATGAGTTCAGAAATGGAGGTGTGGAGCAGTTCGGGGATGGACGAGAGCGAAAGAGACAGCAGCACCAGTCATGATGAAGACGATGAAGAACCGGAGGACGAAGAGCAGCCCGACACTGAGGGTCTGTGCAGGGAGCTGGTGCAAGTGCTGTGTTCGGAGAGAGTTGGTCAAATCACAAAGACGTATCACGACATTGAGGCAGTTACACATCTGCTTGAGGAGAAAGAGCGTGACCTGGAATTAGCAGCCCGGATTGGCCAGTCGCTGCTCAAGCAGAATAAAACCCTGACTGAACGCAACAAACTACTGGACGAACAGCTGGAAATCACCAAGGAAGAGATTGCTCAGCTGCGCCATGAGCTCTCCATGAGAGACGATCTCCTGCACTTCTATGCCAGCACTGAAGATATAGAGCATGCCTCAGAAACGCTACTCATACGGAGTGATTCCTCCTCATCTCTCAGCAACTACATCAATTACGATTTGCTGCAACAGAAACTCAAGGGTTTAGAAGAGGAGAACTTCAAACTGCGCACAGAAgcaaACGAGTTAACATTTGAGACCAACAGTTATGAGGAACAAGAGCAACGGCTTATGATGGTGTGTGTGGATGAACTCTCTACAGCAAATAAACAGGTCGTATCTCTGTCGGAAGAATTAGCCCGGAAGGTGGAGGATTCACTAAGACAGCAAGAGGAGATTAGTGGCCTCCTGGGACAGATTGTTGATCTGGAGCAGCGCTGCAAAGGGCTCACTGCTGAGAACGAGGAGTTAACGCAACATCTCAGTGCTTCCCGGGAATCCCAGGCTCAGCTTAAAACAGAGCTGAAGGAACTGCAGGAGAGGTACTCTGAATGTGAAGACATGCTCCATGAGGCCAGAGAGGACATTAAGAACCTGCGCAATAAGAGTCTGCCCAACAGCACGGTCCAGCGATATAGCACTCTGGCATCCATCGTCCCAATGGATTCACTCGCTGCTGAGATTGAAGGAACCTTTCGGAAAGGACTAGACAGCCCAGCACCCACTGAATACAAGAATCATCCGTTGCGGGTGTTTGAGACCGTAAAGGTGGCAAATCAGGTGGCTCGGCTACGCTCCCAGATTCACTCTCCGCAGGTTCCGGGTTCGAGCTCTACATCACTACGCTCTAGTCGAATCAGTACACCACGGACCAGTTATTATGAATCAGACAATGTTAGTGTCAGCATGGAGGATAAGCACTCCCCCCCGACGCATACACAGGATCAAGGGTTGCTGGAGTCGAAGCGTTTGGGCCAGCCAGGTACTCCAGGTGGGCAGGATTTGGAGGAAGCGCTCCGGTCTCTCTCAGAGCGTCAGGAGAGCCACACGTCAGAGCGGCCGTTCTTCGAGGTGGAGAGGGAAAGGAAACTGCGGGCCCTGCAGAGCGGAAGCAGCGGCAGTGGAGACGGCTCCAGCGGCTTCCTGACTCCCAACGGCAGCGTGGCGTCCACAGGAACCAACTACTCCGGCACCTCCACGCATTCCTCCGGCACAGGATCGTCCCGCTCGTACCTGCCTGAACGCCTGCAGATAGTCAAGCCGCTGGAGGGCTCAGTGACCCTGCATCAATGGCAGCAGCTGGCCAAACCCAATCTCGGGGTCATCCTGCACCCACGGCCGGGTGTCCTCACCAAAGACTTCAGAGAGCTGGACGTGGACTTCCAACACGTCTACAGCCTCAATGACCTCGAGGAGGATGAGCCCGATCTGTCCAAATTCCCCAACCTCCTGAACGGCACCGTGGTCCCTTCATCAGGACCTAACATCCCTCAGACCTCACCCACACCTCCGACCACTAGCTGTCAGATCCTCCATCCCTCCGTCCTTCTCTCCTCCTTCTCCACCAGGAAACGCTGGAACCGGCTCTTTGTACAGTTGTAATATCGTCCTCCATAAACCTTTGGCCCCGCAATGCATCCACTTGTGGGAGCTGTGAGCACGTGAGGACATCGTCAGGCCTCCAGTGCATCTCTGGGTCCACATCACACCTCCACCAGACCTCCTCCCTCGGTCTGCTACAGCTTGTATCAGAGCGC
>XR_006252122.1
CCAGGTGAGTCTGAGCTGCAGTGACACACACTATCAGAAGATTCAGTAACAGCCTCGGCATGTGCAGCCTGGGAGCTTAAAGGAGCATTAGTGAGCAGATAGGAAAGCCTAGGGAACAGCAGCGGTGACTGGCAAAAGACAGGCTGGTCGTGTCATAAATCAGCCTGGCACTgtctgaggagagagagagagagagagagagagagagagagaaagagagaaagagagagagagagactcgaGACAGACCGCATTGCAGGGCAGACACACATAGCAGAGCATGAGTTCAGAAATGGAGGTGTGGAGCAGTTCGGGGATGGACGAGAGCGAAAGAGACAGCAGCACCAGTCATGATGAAGACGATGAAGAACCGGAGGACGAAGAGCAGCCCGACACTGAGGGTCTGTGCAGGGAGCTGGTGCAAGTGCTGTGTTCGGAGAGAGTTGGTCAAATCACAAAGACGTATCACGACATTGAGGCAGTTACACATCTGCTTGAGGAGAAAGAGCGTGACCTGGAATTAGCAGCCCGGATTGGCCAGTCGCTGCTCAAGCAGAATAAAACCCTGACTGAACGCAACAAACTACTGGACGAACAGCTGGAAATCACCAAGGAAGAGATTGCTCAGCTGCGCCATGAGCTCTCCATGAGAGACGATCTCCTGCACTTCTATGCCAGCACTGAAGATATAGAGCATGCCTCAGAAACGCTACTCATACGGAGTGATTCCTCCTCATCTCTCAGCAACTACATCAATTACGATTTGCTGCAACAGAAACTCAAGGGTTTAGAAGAGGAGAACTTCAAACTGCGCACAGAAgcaaACGAGTTAACATTTGAGACCAACAGTTATGAGGAACAAGAGCAACGGCTTATGATGGTGTGTGTGGATGAACTCTCTACAGCAAATAAACAGGTCGTATCTCTGTCGGAAGAATTAGCCCGGAAGGTGGAGGATTCACTAAGACAGCAAGAGGAGATTAGTGGCCTCCTGGGACAGATTGTTGATCTGGAGCAGCGCTGCAAAGGGCTCACTGCTGAGAACGAGGAGTTAACGCAACATCTCAGTGCTTCCCGGGAATCCCAGGCTCAGCTTAAAACAGAGCTGAAGGAACTGCAGGAGAGGTACTCTGAATGTGAAGACATGCTCCATGAGGCCAGAGAGGACATTAAGAACCTGCGCAATAAGAGTCTGCCCAACAGCACGGTCCAGCGATATAGCACTCTGGCATCCATCGTCCCAATGGATTCACTCGCTGCTGAGATTGAAGGAACCTTTCGGAAAGGACTAGACAGCCCAGCACCCACTGAATACAAGAATCATCCGTTGCGGGTGTTTGAGACCGTAAAGGTGGCAAATCAGGTGGCTCGGCTACGCTCCCAGATTCACTCTCCGCAGGTTCCGGGTTCGAGCTCTACATCACTACGCTCTAGTCGAATCAGTACACCACGGACCAGTTATTATGAATCAGACAATGTTAGTGTCAGCATGGAGGATAAGCACTCCCCCCCGACGCATACACAGGATCAAGGGTTGCTGGAGTCGAAGCGTTTGGGCCAGCCAGGTACTCCAGGTGGGCAGGATTTGGAGGAAGCGCTCCGGTCTCTCTCAGAGCGTCAGGAGAGCCACACGTCAGAGCGGCCGTTCTTCGAGGTGGAGAGGGAAAGGAAACTGCGGGCCCTGCAGAGCGGAAGCAGCGGCAGTGGAGACGGCTCCAGCGGCTTCCTGACTCCCAACGGCAGCGTGGCGTCCACAGGAACCAACTACTCCGGCACCTCCACGCATTCCTCCGGCACAGGATCGTCCCGCTCGTACCTGCCTGAACGCCTGCAGATAGTCAAGCCGCTGGAGGGCTCAGTGACCCTGCATCAATGGCAGCAGCTGGCCAAACCCAATCTCGGGGTCATCCTGCACCCACGGCCGGGTGTCCTCACCAAAGACTTCAGAGAGCTGGACGTGGACTTCCAACACGTCTACAGCCTCAATGACCTCGAGGAGGATGAGCCCGATCTGTCCAAATTCCCCAACCTCCTGAACGGCACCGTGGTCCCTTCATCAGGACCTAACATCCCTCAGACCTCACCCACACCTCCGACCACTAGCTGTCAGATCCTCCATCCCTCCGTCCTTCTCTCCTCCTTCTCCACCAGGAAACGCTGGAACCGGCTCTTTGTACAGTTGTAATATCGTCCTCCATAAAGTTTCATtcaagaacaaacaaaacatcgTAGCATAACGGCATCAAGACATTTTGTTACTAATTCTGTCTTCTCTCCTGTACAGATTTAGGTTTAGCCTTTGGCCCCGCAATGCATCCACTTGTGGGAGCTGTGAGCACGTGAGGACATCGTCAGGCCTCCAGTGCATCTCTGGGTCCACATCACACCTCCACCAGACCTCCTCCCTCGGTCTGCTACAGCTTGTATCAGAG

Function

NR:

description
PREDICTED: trafficking kinesin-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252790.1 True 3869 mRNA 0.48 14 15389066 15400192
XM_043252791.1 False 2340 mRNA 0.54 15 15389067 15398614
XR_006252122.1 False 2432 transcript 0.53 16 15389067 15398611

Neighbor

gene id symbol gene type direction distance location
cdc6 cdc6,LOC107718871,LOC107674517,LOC107753851,LOC107680478,LOC107562079 coding upstream 40769 15343559 ~ 15348297 (+)
wipf2a LOC107680504,LOC107562076,LOC107753881,LOC107718872,LOC107674524,LOC107563570 coding upstream 46649 15332922 ~ 15342417 (+)
sp2 sp2,LOC107680542,LOC107718867,LOC107674551,LOC107753850 coding upstream 83582 15297845 ~ 15305484 (+)
socs7 socs7,LOC107753846,LOC107680565,LOC107718866,LOC107674567 coding upstream 92886 15283733 ~ 15296180 (+)
mrpl45 mrpl45,LOC107753856,LOC107680544 coding upstream 121227 15264806 ~ 15267839 (+)
krt99 LOC107753854,LOC107680487,LOC107674510,LOC107562074,LOC107718894,LOC107564824 coding downstream 3661 15403853 ~ 15410909 (+)
krt15 krt15,LOC107562073,LOC107680524,LOC107753852,LOC107674548,LOC107563552,LOC107718876 coding downstream 20592 15420784 ~ 15423146 (+)
LOC122354569 krt94,LOC107563560,LOC107753855,LOC107680518,LOC107562075,LOC107674540,LOC107718880,LOC107753853 coding downstream 40296 15440488 ~ 15443082 (+)
LOC122353576 krt93,LOC107753853,LOC107674539,LOC107718879,LOC107563541,LOC107680517,LOC107753855,LOC107680518,LOC107562075 coding downstream 45979 15446171 ~ 15449037 (+)
c11h6orf120 zgc:77929,LOC107680519,LOC107579608,LOC107674518,LOC107563672,LOC107718909 coding downstream 60648 15460840 ~ 15463651 (+)
LOC122354565 NA non-coding upstream 5617 15374954 ~ 15383449 (+)
G82080 jupa,LOC107674533,LOC107562072,LOC107753847,LOC107680531,LOC107577149 non-coding upstream 34263 15353693 ~ 15354803 (+)
G82071 LOC107753843,LOC107562070,LOC107563489,LOC107718864,LOC107680456 non-coding upstream 112920 15274713 ~ 15276146 (+)
G82060 NA non-coding upstream 147784 15236600 ~ 15241282 (+)
G82055 NA non-coding upstream 186531 15197912 ~ 15202535 (+)
LOC122354481 NA non-coding downstream 15455 15415647 ~ 15418985 (+)
G82096 NA non-coding downstream 24225 15424417 ~ 15429408 (+)
G82109 LOC107718897,LOC107674554,LOC107680534,LOC107597144 non-coding downstream 98922 15499114 ~ 15499972 (+)
G82116 NA non-coding downstream 102734 15502926 ~ 15524598 (+)
G82133 NA non-coding downstream 133238 15533430 ~ 15533904 (+)
LOC122354546 abcc10,LOC107753844,LOC107680503,LOC107674523,LOC107718869,LOC107680501 other upstream 57434 15306652 ~ 15331632 (+)
G82072 LOC107753843,LOC107680456,LOC107562070,LOC107718864,LOC107563489 other upstream 106909 15280979 ~ 15282157 (+)
palm1a palm,palm1a,LOC107656088,LOC107674557,LOC107723854,LOC107753814,LOC107593145 other upstream 533194 14824407 ~ 14855872 (+)
zfyve9b zfyve9b,LOC107753830,LOC107656105,LOC107562066,LOC107723065,LOC107665831 other upstream 900257 14472566 ~ 14488809 (+)
ptgfr ptgfr,LOC107753832,LOC107562064,LOC107655972,LOC107665835 other upstream 920463 14465892 ~ 14468603 (+)
col9a1a col9a1a,LOC107674561,LOC107563512,LOC107753862,LOC107680514,LOC107718896,LOC108438673 other downstream 56690 15456882 ~ 15491776 (+)
G82131 NA other downstream 130401 15530593 ~ 15531490 (+)
mcf2l2 mcf2l2,LOC107656072,LOC107753795,LOC107563754,LOC107674528,LOC108439422,LOC108270998,LOC107718904 other downstream 341445 15741637 ~ 15802025 (+)
LOC122354637 naaladl2,LOC107674503,LOC107600312,LOC107568636,LOC107674502 other downstream 753108 16153300 ~ 16345752 (+)
LOC122353648 cap2,LOC107706226,LOC107754274,LOC107592045 other downstream 1194370 16594562 ~ 16604382 (+)

Expression


Co-expression Network