trnap-cgg_15


Basic Information

Item Value
gene id trnap-cgg_15
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2874145 ~ 2874216 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1706
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1706 True 72 tRNA 0.63 1 2874145 2874216

Neighbor

gene id symbol gene type direction distance location
LOC122354490 gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding downstream 62781 2807984 ~ 2811364 (-)
trnai-aau_28 NA coding downstream 87199 2786874 ~ 2786946 (-)
trnaf-gaa_28 NA coding downstream 87358 2786710 ~ 2786787 (-)
trnaf-gaa_27 NA coding downstream 88925 2785148 ~ 2785220 (-)
trnap-cgg_6 NA coding downstream 89531 2784543 ~ 2784614 (-)
camk1b LOC107714490,LOC107566450,LOC107680448,LOC107572399 coding upstream 122283 2996499 ~ 3037108 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding upstream 178480 3052696 ~ 3058430 (-)
LOC122354702 NA coding upstream 181481 3055697 ~ 3055773 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding upstream 382663 3256879 ~ 3264114 (-)
pusl1 NA coding upstream 411745 3285961 ~ 3299062 (-)
LOC122354391 NA non-coding downstream 74117 2799533 ~ 2800028 (-)
G78774 NA non-coding downstream 78849 2795022 ~ 2795296 (-)
G78773 NA non-coding downstream 173416 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 176673 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 177448 2696409 ~ 2696697 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 204798 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 240081 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 349519 3223735 ~ 3241319 (-)
G78903 NA non-coding upstream 356911 3231127 ~ 3232742 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding upstream 391968 3266184 ~ 3266672 (-)
trnai-aau_32 NA other downstream 738 2873334 ~ 2873407 (-)
trnaf-gaa_40 NA other downstream 897 2873176 ~ 2873248 (-)
trnap-cgg_14 NA other downstream 1503 2872571 ~ 2872642 (-)
trnai-aau_31 NA other downstream 2307 2871764 ~ 2871838 (-)
trnap-cgg_13 NA other downstream 3067 2871009 ~ 2871078 (-)
trnaf-gaa_41 NA other upstream 531 2874747 ~ 2874818 (-)
trnai-aau_33 NA other upstream 686 2874902 ~ 2874977 (-)
trnai-aau_34 NA other upstream 2253 2876469 ~ 2876543 (-)
trnaf-gaa_42 NA other upstream 3655 2877871 ~ 2877948 (-)
trnai-aau_35 NA other upstream 3818 2878034 ~ 2878108 (-)

Expression


Co-expression Network