wdr35 (wdr35,LOC107707974)


Basic Information

Item Value
gene id wdr35
gene name wdr35,LOC107707974
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12082143 ~ 12096686 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254538.1
TAGAAACCAAGCAAACCGTTTTAAAGCAGCATACATGCATGGAACCTACGCCGAAAATTCTAATGCTTTAAAGAacggattttttaaaaaacatttcaattggAAAGAAGACGACGCTGGAATCCAAAAAAGTCATCGGGacctaaaaacattttagcaactCCCTAAAAACCGAGAACAAATTGGCTCATAACGCCGAGGCAGGCTAGCAAGCTAAGCTAATGCAAAGATGTTTATATATCTCAGCAAGAAGATTGCGATTCCAAACAATACCGTTTTAAAGTGTGTTTCTTGGAACAAAGACCAGGGTTTCATCGCCTGTGGAGGTGAAGATGGGCTTTTGAAAGTTCTCAAACTTGAGACATATACAGATGATGCCAAACTGAAAGGCTTGGCAGCTCCCAGCAATCTCTCTATGAATCAGACTCTGGAGGGACACAGTGGTGCAGTGCAGGTTGTTACATGGAATGAACAGTACCAGAAACTGACCACCAGTGACCAGAATGGGCTCATTATCGTTTGGATGCTTTACAAAGGTTCATGGTATGAAGAAATGATTAACAATAGGAATAAATCTGTAGTAAGGAGCATGAGCTGGAATGCTGATGGTCTGAAGATCTGTATTGTGTATGAGGATGGTGCTGTGATTGTGGGCTCAGTGGATGGGAACAGGATCTGGGGTAAAGAACTTAAGGGGACCCAGTTGGCACACGTGGCCTGGTCTCCAGACAGTAAAATCCTGCTTTTTGGGATGGCCAATGGAGAGATCCACATCTACGACAACCAAGGAAACTTCATTATGAAGATGACCATGAGTTGTTTGGCGAATGCAACAGGTGCCCTCAATATAGCAGGTATTCACTGGTACCCTGGCACAGAAGGGTATCTGGAACCAGACTGCCCCTGCCTAGCTGTTTGCTTCACTAATGGGCAGTGCCAGGTGATGAGGCACGAGAGTGATGAAAGTCCTGTGCCCATCGAGACGGGTATGTGGCATGTGGCCAGTATCCAGTGGAATCACTGTGGCAGTGTTCTGGCTATAGCAGGATCTATCAGAAACAGCGGAGCGGAGAAAGACATAAATGTTGTTCAATTCTACACACCGTTTGGAGAGCACTTACGGACTTTGAAGGTCCCTGGCAAGCAGATGACTGCTGTATCATGGGAAGGTGGAGGACTCCGAATTGGCCTAGCTGTAGATTCTTACATTTACTTTGCTAACATTCGGCCGGATTACAAGTGGGGTTACTGCAGTAACACGGTGGTGTATGCATACACACGACCTGATAGGCTGGAGTACAGCGTGGTCTTTTGGGACACTAAGAATAATGAGAAGTTTGTAAAATACGTCAAGAGTCTCATGTCCATCACCACCTGTGgagatttttgcattttggcCACCAAAGCGGACGACACACATCCACAGgagGACACTGAGACTGAGGCTGGATCAGCTACGGCATTTAATGAGCTGTCCAATCAAAACACCTCAAAGGATCGGTCTAAAAGGAGAAAGTACGTTTTGGTGTTGTGTAACTCCATTGGAACCCCACAGGACTCTAAATATATTGACATCgACCCCCTTTTTGTCACTATGACGAAGACTCACGTGATTGCTTCTTCTAAGGAAGCATTTTATGTTTGGCAGTATCGTGTGGCTAAGAAACTCACTGCTCTTGAAATCAACCAGGTTGCCAAGACAAGAAAGGAAGGTCGAGAAAGGGTTTATCACATCGATGACAGTCCAAGCGGAACATCGGATGGGACACTGAACTTTGCCAAAGCCTTCACAgcCACCAGAGATTTGATCTGCTGCATTACAGCATCGGACAAAATGCTTATAGTGGGCCGTGAGTCTGGGATCCTACAGAGATACAGCCTGCCCAACATTACCCTCCTGCAGAAATATTCGCTTACCTCCAGACCGTATCAGCTGTCCCTCAATTGTAATTCCAGcCGGCTGGCTATTATAGACATTACAGGCGTGTTGACGTTCTTGGACGTAGAGACACGGGCTTCGTCAGGGGATGTAGAGGGCGGGTCGGCAGCTGGAGACCCATCTAAATTCGAGCGCAAGGATGTCTGGGATATGAAATGGGCTAATGACAACCCAGATTTGTTCTCCATGATGGAGAAAACCAGAATGTATGTCTTTAGAAACCTGGATCCTGAGGAACCAATTCAAACGTCTGGCTTTATCTGTCACTTTGAGGATCTGGAGATCAAGTCTGTTCTATTGGATGAGATTATGAGGGATCCAGAAGTTCcaaataaagattatttaataaacttcGAGATCCGCTCACTGAGGGACAGCAGGGCACTTATTGAAAAGGTTGGAATTGAAGATGCTTCTCAGTTTATTGAGGACAATCCCCATCCACGTCTCTGGCGTCTGTTAGCAGAAGCAGCGCTGCAGAAGCTGGATCTGAAGATGGCCGAACAGGCGTTTGTGCGCTGTAGAGACTACCAGGGCATTGAATTTGTGAAGAGACTGAGCAACCTACAGAGTGAAGCTATGAAACAAGCTGAGGTGGCTGCTTACTTCAGCAGGTTTGAGGAGGCAGAGAGGATGTACCTCGACATGGACCGCAgGGATTTGGCGATAGGTTTGCGCATAAAGCTCGGTGATTGGTTCAGGGTTCTGCAGTTGTTGAAGACAGGATCAGGTGACTCTGATGATGCTCTTCTGGAGCAGGCCTACAACGCCATTGGAGACTATtttgcagacagacagaaatgGTTAAATGCAGTGCAGTATTACCTTCAGGGTCGTAATCAGGAGCGTCTGGCTGAATGTTATTATATGCTGGAGGACTATGACGGTTTGGAGAGACTTGCAAATTCTTTACCAGAAAACCATAAACTGCTACCAgacaTTGGTCAGATGTTTGTTACTGTAGGAATGTGTGAGCAGGCCGTCAGTGCATTTCTGAAATGTAACCAGCCCAAAGCAGCTGTGGATGCCTGTGTGCATCTAAACCAGTGGAACAAAGCTGTTGAACTCGCCAAAGACCACAGTATGAAGGAAATTGGGCCTCTTTTGTCCAAATATGCCTCGCATCTgcttgagaaaaacaaaactctaGAGGCTGTAGAGCTCTACAGAAAAGCACATCACTTCCTGGATGCTGCCAAACTCATGTTTAAGATCGCAGAAGAAGAGGCAAAAAAAAGAACGCGGCCACTACGAGTGAAGAAGCTGTATGTGCTCGCCGCCCTGCTGGTGGAGAACTTCCACACCCAGATCAAAAGTTCACAGCAAAGCAAAATCAAGGGCAAGAAATCAGAGgCTACCAGTGCATTAGCAGGGCTGTTAGAGGAAGATGAGTCGTCTTCAGACAGCCGTATCCTGGATGACGCCTGGCGCGGGGCGGAGGCCTATCATTTCTTTCTGCTTGCGCAGAGACAGCTGTACGAAGGCAAGGTGGACATGGCCATGAGGACAGCTCTCCATCTCCGTGATTATGAGGATATTATCCCCGCTGTGGAGATTTACTCTCTGCTAGCCATCTGCTCATCTGCCAATTGTGCGTTTGGTACTTGCTCACGTGCCTTTATTAAGCTGGAGTCTCTAGAAAcactgactccagatcagaggCAGCTTTATGAAGACCTGGCGCTGGAGATCTTCACCAAACACAGCCCCCGAGACACCCGGCAAAGCCAGCGGGACAGTCTCACTGATGGGCCGGAGGGCAAGTTACCCACCTGTATAGTGACAGGAAGAGTGATATCGGAGTATCAGTTCTGGATGTGCAGTGTGTGTAAGCACTGCGCTTTGGAGCAGGATATCACAAACCACAGCTTCTGTCCTCTCTGTCACTCCCCAGTGGGATAGATTTTCCCAGTTTCAGTCTTTTTGATGTACTGTGGGTCACAAACTCTGCCACAAGAGTAGaaggtttaaaatatataatttggatgttcaatatatatatatatatatttattaatttttttatatgtgaaaTTTTCATGTgcttatgtatataattatattatattatttttacttcttCCAAAATTCTGCATAAACCAGTCATATTCATATGTCCACAATCGCATCCCACTCAATTcaacaatttaaataacaatgagTAAAAAGTTTAACAATTACGAATGAATCATTTGGCTAATAactttgtgtatatttgtttagtaaaaaaaattatatggaTTCAGTGTATTCTGTTAATGCCACATTGATTTAACCAAtataacaatgtaaaataaatgttcctatatttacaaaaatatatcttaa
>XM_043254539.1
TAGAAACCAAGCAAACCGTTTTAAAGCAGCATACATGCATGGAACCTACGCCGAAAATTCTAATGCTTTAAAGAacggattttttaaaaaacatttcaattggAAAGAAGACGACGCTGGAATCCAAAAAAGTCATCGGGacctaaaaacattttagcaactCCCTAAAAACCGAGAACAAATTGGCTCATAACGCCGAGGCAGGCTAGCAAGCTAAGCTAATGCAAAGATGTTTATATATCTCAGCAAGAAGATTGCGATTCCAAACAATACCGTTTTAAAGTGTGTTTCTTGGAACAAAGACCAGGGTTTCATCGCCTGTGGAGGTGAAGATGGGCTTTTGAAAGTTCTCAAACTTGAGACATATACAGATGATGCCAAACTGAAAGGCTTGGCAGCTCCCAGCAATCTCTCTATGAATCAGACTCTGGAGGGACACAGTGGTGCAGTGCAGGTTGTTACATGGAATGAACAGTACCAGAAACTGACCACCAGTGACCAGAATGGGCTCATTATCGTTTGGATGCTTTACAAAGGTTCATGGTATGAAGAAATGATTAACAATAGGAATAAATCTGTAGTAAGGAGCATGAGCTGGAATGCTGATGGTCTGAAGATCTGTATTGTGTATGAGGATGGTGCTGTGATTGTGGGCTCAGTGGATGGGAACAGGATCTGGGGTAAAGAACTTAAGGGGACCCAGTTGGCACACGTGGCCTGGTCTCCAGACAGTAAAATCCTGCTTTTTGGGATGGCCAATGGAGAGATCCACATCTACGACAACCAAGGAAACTTCATTATGAAGATGACCATGAGTTGTTTGGCGAATGCAACAGGTGCCCTCAATATAGCAGGTATTCACTGGTACCCTGGCACAGAAGGGTATCTGGAACCAGACTGCCCCTGCCTAGCTGTTTGCTTCACTAATGGGCAGTGCCAGGTGATGAGGCACGAGAGTGATGAAAGTCCTGTGCCCATCGAGACGGGTATGTGGCATGTGGCCAGTATCCAGTGGAATCACTGTGGCAGTGTTCTGGCTATAGCAGGATCTATCAGAAACAGCGGAGCGGAGAAAGACATAAATGTTGTTCAATTCTACACACCGTTTGGAGAGCACTTACGGACTTTGAAGGTCCCTGGCAAGCAGATGACTGCTGTATCATGGGAAGGTGGAGGACTCCGAATTGGCCTAGCTGTAGATTCTTACATTTACTTTGCTAACATTCGGCCGGATTACAAGTGGGGTTACTGCAGTAACACGGTGGTGTATGCATACACACGACCTGATAGGCTGGAGTACAGCGTGGTCTTTTGGGACACTAAGAATAATGAGAAGTTTGTAAAATACGTCAAGAGTCTCATGTCCATCACCACCTGTGgagatttttgcattttggcCACCAAAGCGGACGACACACATCCACAGgagGACACTGAGACTGAGGCTGGATCAGCTACGTACGTTTTGGTGTTGTGTAACTCCATTGGAACCCCACAGGACTCTAAATATATTGACATCgACCCCCTTTTTGTCACTATGACGAAGACTCACGTGATTGCTTCTTCTAAGGAAGCATTTTATGTTTGGCAGTATCGTGTGGCTAAGAAACTCACTGCTCTTGAAATCAACCAGGTTGCCAAGACAAGAAAGGAAGGTCGAGAAAGGGTTTATCACATCGATGACAGTCCAAGCGGAACATCGGATGGGACACTGAACTTTGCCAAAGCCTTCACAgcCACCAGAGATTTGATCTGCTGCATTACAGCATCGGACAAAATGCTTATAGTGGGCCGTGAGTCTGGGATCCTACAGAGATACAGCCTGCCCAACATTACCCTCCTGCAGAAATATTCGCTTACCTCCAGACCGTATCAGCTGTCCCTCAATTGTAATTCCAGcCGGCTGGCTATTATAGACATTACAGGCGTGTTGACGTTCTTGGACGTAGAGACACGGGCTTCGTCAGGGGATGTAGAGGGCGGGTCGGCAGCTGGAGACCCATCTAAATTCGAGCGCAAGGATGTCTGGGATATGAAATGGGCTAATGACAACCCAGATTTGTTCTCCATGATGGAGAAAACCAGAATGTATGTCTTTAGAAACCTGGATCCTGAGGAACCAATTCAAACGTCTGGCTTTATCTGTCACTTTGAGGATCTGGAGATCAAGTCTGTTCTATTGGATGAGATTATGAGGGATCCAGAAGTTCcaaataaagattatttaataaacttcGAGATCCGCTCACTGAGGGACAGCAGGGCACTTATTGAAAAGGTTGGAATTGAAGATGCTTCTCAGTTTATTGAGGACAATCCCCATCCACGTCTCTGGCGTCTGTTAGCAGAAGCAGCGCTGCAGAAGCTGGATCTGAAGATGGCCGAACAGGCGTTTGTGCGCTGTAGAGACTACCAGGGCATTGAATTTGTGAAGAGACTGAGCAACCTACAGAGTGAAGCTATGAAACAAGCTGAGGTGGCTGCTTACTTCAGCAGGTTTGAGGAGGCAGAGAGGATGTACCTCGACATGGACCGCAgGGATTTGGCGATAGGTTTGCGCATAAAGCTCGGTGATTGGTTCAGGGTTCTGCAGTTGTTGAAGACAGGATCAGGTGACTCTGATGATGCTCTTCTGGAGCAGGCCTACAACGCCATTGGAGACTATtttgcagacagacagaaatgGTTAAATGCAGTGCAGTATTACCTTCAGGGTCGTAATCAGGAGCGTCTGGCTGAATGTTATTATATGCTGGAGGACTATGACGGTTTGGAGAGACTTGCAAATTCTTTACCAGAAAACCATAAACTGCTACCAgacaTTGGTCAGATGTTTGTTACTGTAGGAATGTGTGAGCAGGCCGTCAGTGCATTTCTGAAATGTAACCAGCCCAAAGCAGCTGTGGATGCCTGTGTGCATCTAAACCAGTGGAACAAAGCTGTTGAACTCGCCAAAGACCACAGTATGAAGGAAATTGGGCCTCTTTTGTCCAAATATGCCTCGCATCTgcttgagaaaaacaaaactctaGAGGCTGTAGAGCTCTACAGAAAAGCACATCACTTCCTGGATGCTGCCAAACTCATGTTTAAGATCGCAGAAGAAGAGGCAAAAAAAAGAACGCGGCCACTACGAGTGAAGAAGCTGTATGTGCTCGCCGCCCTGCTGGTGGAGAACTTCCACACCCAGATCAAAAGTTCACAGCAAAGCAAAATCAAGGGCAAGAAATCAGAGgCTACCAGTGCATTAGCAGGGCTGTTAGAGGAAGATGAGTCGTCTTCAGACAGCCGTATCCTGGATGACGCCTGGCGCGGGGCGGAGGCCTATCATTTCTTTCTGCTTGCGCAGAGACAGCTGTACGAAGGCAAGGTGGACATGGCCATGAGGACAGCTCTCCATCTCCGTGATTATGAGGATATTATCCCCGCTGTGGAGATTTACTCTCTGCTAGCCATCTGCTCATCTGCCAATTGTGCGTTTGGTACTTGCTCACGTGCCTTTATTAAGCTGGAGTCTCTAGAAAcactgactccagatcagaggCAGCTTTATGAAGACCTGGCGCTGGAGATCTTCACCAAACACAGCCCCCGAGACACCCGGCAAAGCCAGCGGGACAGTCTCACTGATGGGCCGGAGGGCAAGTTACCCACCTGTATAGTGACAGGAAGAGTGATATCGGAGTATCAGTTCTGGATGTGCAGTGTGTGTAAGCACTGCGCTTTGGAGCAGGATATCACAAACCACAGCTTCTGTCCTCTCTGTCACTCCCCAGTGGGATAGATTTTCCCAGTTTCAGTCTTTTTGATGTACTGTGGGTCACAAACTCTGCCACAAGAGTAGaaggtttaaaatatataatttggatgttcaatatatatatatatatatttattaatttttttatatgtgaaaTTTTCATGTgcttatgtatataattatattatattatttttacttcttCCAAAATTCTGCATAAACCAGTCATATTCATATGTCCACAATCGCATCCCACTCAATTcaacaatttaaataacaatgagTAAAAAGTTTAACAATTACGAATGAATCATTTGGCTAATAactttgtgtatatttgtttagtaaaaaaaattatatggaTTCAGTGTATTCTGTTAATGCCACATTGATTTAACCAAtataacaatgtaaaataaatgttcctatatttacaaaaatatatcttaa

Function

symbol description
wdr35 Acts upstream of or within cilium assembly. Predicted to be located in ciliary basal body and cytoplasm. Predicted to be part of intraciliary transport particle A. Predicted to be active in axoneme. Human ortholog(s) of this gene implicated in Ellis-Van Creveld syndrome; cranioectodermal dysplasia 2; and short-rib thoracic dysplasia 7 with or without polydactyly. Orthologous to human WDR35 (WD repeat domain 35).

NR:

description
WD repeat-containing protein 35 isoform X2

GO: NA

KEGG:

id description
K19674 WDR35, IFT121; WD repeat-containing protein 35

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254538.1 True 4267 mRNA 0.45 29 12082143 12096686
XM_043254539.1 False 4210 mRNA 0.45 28 12082143 12096686

Neighbor

gene id symbol gene type direction distance location
kcns3a kcns3a,LOC107681537,LOC107588718,LOC107757122,LOC107708176,LOC107585531,LOC107675527 coding downstream 729 12077530 ~ 12081414 (-)
syt14a syt14a,syt14,LOC107548616,LOC107577703,LOC107675522,LOC107707984,LOC107668771,LOC107757094 coding downstream 294001 11755596 ~ 11788142 (-)
sertad4 sertad4,LOC107707050,LOC107668837,LOC107588595,LOC107548617,LOC107757095 coding downstream 332129 11739395 ~ 11750014 (-)
LOC122356134 NA coding downstream 348907 11728523 ~ 11733236 (-)
trmt5 trmt5,LOC107707083,LOC107668822,LOC107588721,LOC107757133 coding downstream 400826 11678617 ~ 11681317 (-)
matn3b matn3b,LOC107706968,LOC107675558,LOC107757123,LOC107585476,LOC107588687 coding upstream 573 12097259 ~ 12110126 (-)
bend3 LOC107588588,LOC107706947,LOC107681544,LOC107757121,LOC107675557 coding upstream 8012 12104698 ~ 12110132 (-)
pdss2 pdss2,LOC107681545,LOC107706935,LOC107757119,LOC107675584,LOC107585477,LOC107588587 coding upstream 17220 12113906 ~ 12139838 (-)
rock2a rock2,rock2a,LOC107681539 coding upstream 87193 12183879 ~ 12218641 (-)
c13h2orf50 si:dkey-18j18.3,LOC107588716,LOC107705367,LOC107681538,LOC107757106,LOC107580201,LOC107675537,LOC107585518 coding upstream 123271 12219957 ~ 12265364 (-)
G93148 NA non-coding downstream 40214 12041695 ~ 12041929 (-)
G93144 NA non-coding downstream 45325 12036612 ~ 12036818 (-)
LOC122357025 LOC107585516,LOC108412594,LOC105899417 non-coding downstream 52521 11983711 ~ 12029622 (-)
LOC122356216 NA non-coding downstream 143962 11904768 ~ 11938181 (-)
G93111 NA non-coding downstream 279857 11802015 ~ 11802286 (-)
G93315 NA non-coding upstream 18240 12114926 ~ 12166898 (-)
LOC122357111 NA non-coding upstream 25254 12121940 ~ 12246940 (-)
LOC122356854 NA non-coding upstream 304985 12401671 ~ 12406933 (-)
G93392 jag2a,LOC107654986,LOC107705348,LOC107724379,LOC107675567,LOC107600569,LOC107585503 non-coding upstream 435295 12531981 ~ 12533886 (-)
G93394 NA non-coding upstream 437300 12533986 ~ 12535068 (-)
utp25 diexf,LOC107668835,LOC107707040,LOC107675582,LOC107757128 other downstream 283111 11771428 ~ 11799032 (-)
six1a six1a,six1,LOC107588725,LOC107675533,LOC107708210,LOC107668775,LOC108434988 other downstream 434108 11643930 ~ 11648035 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other downstream 549686 11525403 ~ 11532457 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other downstream 863158 11200552 ~ 11218985 (-)
G92819 NA other downstream 1146812 10924944 ~ 10935331 (-)
vti1b vti1b,LOC107655020,LOC107705385,LOC107724223,LOC107675543 other upstream 181768 12278454 ~ 12293594 (-)
tmem234 tmem234,LOC107675523,LOC107576456 other upstream 332511 12429197 ~ 12430778 (-)
LOC122356414 NA other upstream 460391 12557077 ~ 12597302 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other upstream 1213266 13309952 ~ 13325051 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other upstream 1423727 13520413 ~ 13558834 (-)

Expression


Co-expression Network