G5799


Basic Information

Item Value
gene id G5799
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 9090541 ~ 9090878 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU6420
GTAAAAGGCCACTTAAAGGGTTAGTTCACCCAAAAATGAAATCACTCTCATGTCAAAACATATTTAGGGCCCGAGCACCGATGGTGTGTATTGTAATTGCTCAGTCAATTCTTCTTCTTCTCCGAAATGAATCGCATTCTTGAGGGCCTAAACGTGCTCGAAAACTCAAGAAACTTTGCACACGCGTCAGAAGTGGTGAAAATTTATGTCTGATGTGGGTTTCAGAATTAGGTGTGGCAAAATGGCTCAATAGCGCCACCTACAAAATTTCAATCAAGCGCCCTTCGTGCTACGTTTCATGTACAGGTATGAAATTTGGTAGACACATGTAACAGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6420 True 338 lncRNA 0.45 1 9090541 9090878

Neighbor

gene id symbol gene type direction distance location
CI01000000_09032021_09035754 NA coding upstream 54300 9031831 ~ 9036241 (+)
CI01000000_08996817_09010564 CSNK1A1, CSNK1A1.L coding upstream 79899 8995996 ~ 9010642 (+)
CI01000000_08987936_08991586 NA coding upstream 98919 8987166 ~ 8991622 (+)
CI01000000_08980818_08984618 SPDL1 coding upstream 105923 8980439 ~ 8984618 (+)
CI01000000_08962721_08970678 GSR coding upstream 119806 8962384 ~ 8970735 (+)
CI01000000_09174041_09195118 NA coding downstream 81426 9172304 ~ 9197448 (+)
CI01000000_09520406_09526332 NA coding downstream 429173 9520051 ~ 9526391 (+)
CI01000000_09639185_09696791 NA coding downstream 547270 9638148 ~ 9696880 (+)
CI01000000_09783239_09786900 NA coding downstream 692361 9782906 ~ 9787542 (+)
CI01000000_09842885_09844618 NA coding downstream 751853 9842731 ~ 9845663 (+)
G5793 NA non-coding upstream 7977 9082333 ~ 9082564 (+)
G5783 NA non-coding upstream 23216 9067079 ~ 9067325 (+)
G5781 NA non-coding upstream 25474 9064827 ~ 9065067 (+)
G5779 NA non-coding upstream 27597 9062738 ~ 9062944 (+)
G5773 NA non-coding upstream 47512 9042728 ~ 9043029 (+)
G5806 NA non-coding downstream 8899 9099777 ~ 9100068 (+)
G6227 NA non-coding downstream 275809 9366687 ~ 9367004 (+)
G6231 NA non-coding downstream 279176 9370054 ~ 9433129 (+)
G6258 NA non-coding downstream 359724 9450602 ~ 9450842 (+)
G6261 NA non-coding downstream 368892 9459770 ~ 9459984 (+)
G2850 NA other upstream 4364059 4725986 ~ 4726482 (+)
G2774 NA other upstream 4636309 4453778 ~ 4454232 (+)
G579 NA other upstream 7181733 1767917 ~ 1908808 (+)
G435 NA other upstream 7657687 1425121 ~ 1432854 (+)
G350 NA other upstream 8413604 671842 ~ 676937 (+)
G6811 NA other downstream 1113953 10204831 ~ 10321679 (+)
G6820 NA other downstream 1336345 10427223 ~ 10433018 (+)
G7018 NA other downstream 1887611 10978489 ~ 10980872 (+)
G7153 NA other downstream 2153579 11244457 ~ 11245633 (+)
G7514 NA other downstream 3045644 12136522 ~ 12137008 (+)

Expression


Co-expression Network