G102068


Basic Information

Item Value
gene id G102068
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 24577188 ~ 24577506 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU150900
CAAAATAATAAGGataatatattacacacacacacacacacacacaaaaaaaaacagcccctGCTCTCATTATCTCCCATGATTCTAATctacacaaaacacaaagccTTCTATGCTTCAGGCCAGGCCTCCATCCTTCACCTCCAAGTTAGAGAAATTAGCGAATCTGCATTTGTGccagaaaacaaaacagggcAACTGATAATTCAACTTCAACAGTGCCCTGGCATCTAATGAGCTTTCAAAGCCGAGGAGACGAAGAAATGAGCCTGACGTCTGCACAAAACAGAGCGCCTTGTAAAATTAGCCTGCCTTTAAT

Function

GO:

id name namespace
GO:0009615 response to virus biological_process

KEGG:

id description
ko04657 IL-17 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU150900 True 319 lncRNA 0.42 1 24577188 24577506

Neighbor

gene id symbol gene type direction distance location
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 coding upstream 132664 24392320 ~ 24444524 (+)
elf1 LOC107680959,LOC107593207,LOC107740150,LOC107560441,LOC107688684 coding upstream 310579 24229581 ~ 24266609 (+)
trnae-uuc_32 NA coding upstream 348940 24228177 ~ 24228248 (+)
drp2 drp2,LOC107724836,LOC107593231 coding upstream 366591 24101551 ~ 24210597 (+)
cenpi LOC107680969,LOC107740156,LOC107593211,LOC107560443,LOC107688687,LOC107724835 coding upstream 475840 24090266 ~ 24101348 (+)
glra4a glra4a,LOC107593205,LOC107724829,LOC100711741,LOC101466695,LOC107680943,LOC106604454 coding downstream 412379 24989885 ~ 25023912 (+)
gla gla coding downstream 459138 25036644 ~ 25040781 (+)
btk btk,LOC107740143,LOC107593204,LOC107742472,LOC107680332 coding downstream 463918 25041424 ~ 25051414 (+)
zgc:101583 LOC107554838,LOC107680947,LOC107742473,LOC107554836,LOC107740185,LOC107680341 coding downstream 474313 25051819 ~ 25054924 (+)
gsr gsr,LOC107740139,LOC107593200,LOC107742476,LOC107680343,LOC107554844,LOC107680979 coding downstream 482579 25060085 ~ 25068427 (+)
G102019 NA non-coding upstream 306820 24270051 ~ 24270368 (+)
LOC122358238 NA non-coding upstream 626623 23949157 ~ 23950565 (+)
LOC122357577 NA non-coding upstream 1218496 23267299 ~ 23358692 (+)
G101784 NA non-coding upstream 1815550 22761292 ~ 22761638 (+)
G101761 rnf130,LOC107723823,LOC107740126,LOC107682892 non-coding upstream 1846957 22723934 ~ 22730231 (+)
G102069 NA non-coding downstream 697 24578203 ~ 24578529 (+)
G102143 LOC107680971 non-coding downstream 513006 25090512 ~ 25693470 (+)
G102148 NA non-coding downstream 538364 25115870 ~ 25116759 (+)
G102164 NA non-coding downstream 865468 25442974 ~ 25465122 (+)
G102168 NA non-coding downstream 888814 25466320 ~ 25502146 (+)
G102017 LOC107680957,LOC107593209,LOC107740154,LOC100534741 other upstream 360425 24216243 ~ 24216763 (+)
tmem35 tmem35a,tmem35,LOC107680989,LOC107740187,LOC107724834,LOC107688707 other upstream 487666 24086724 ~ 24089522 (+)
nitr14b NA other upstream 604939 23970152 ~ 23972249 (+)
neil3 neil3 other upstream 1988655 22584190 ~ 22588533 (+)
gria2b gria2b,gria2,LOC107554451,LOC107723812,LOC107740107,LOC107669079,LOC108411138,LOC107662960 other upstream 2266347 22282291 ~ 22310841 (+)
LOC122358267 LOC107593202,LOC107740141,LOC107680337,LOC107554835,LOC108268827,LOC105904295 other downstream 480246 25057752 ~ 25059200 (+)
G102332 wdtc1,LOC107738793,LOC107673335 other downstream 1455473 26032979 ~ 26035638 (+)
gnrhr3 LOC107567517,LOC107673322,LOC108436550,LOC105908885 other downstream 1591052 26168558 ~ 26175734 (+)
khdc4 kiaa0907,LOC107570803,LOC107565361,LOC107679549 other downstream 1796827 26374333 ~ 26383784 (+)
LOC122357543 vps13b,LOC107570792,LOC107671824 other downstream 1824021 26401527 ~ 26429629 (+)

Expression


Co-expression Network