G102148


Basic Information

Item Value
gene id G102148
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 25115870 ~ 25116759 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU151022
ACGATTGAACAGTAGTTTTAATGGAACGACatcagttcatttatttttttatctttacattagacattttaaacaaatatatttaaatgcgtAAAGTatgtcaaatataatatatgatatttagctttaaaataTCACGTATTTGTAATATGAACATTCAAAGTTTGGGGCgaatttttaaagtgaaatatattCTAGGCAAATTGATCAAAGGAGACagtgtttgtaatttttttgtcatttgcatttcaaataaacgctgttatttttattttattttttttaaataaaaatgaatgtagcCTTGTTGAGCTTAAGGAATGCTGAATAAACCTTAACAATCCCAAACTTTGGAATGGCATATAGCAATACGTGTTAAAATTGAGCATGCCGAGCAACATAGTAACACATGATAATATAAGAGGTACGGATAAAATATCATCTGATAAATTCAGTTGTCCAGCCCCACCCCCAAGAACAGTATTTCCAGGAATCCCCTGGGAAAACTGGACCCCGGGGATGGGGAAATGATGGAATTCATTGTGACGGAAGTCTGGCAACAATAGAAGCACGTTTAATCCTAGCATTACCAACATCTGGTCTACCAAACAACAACGGTTAGGCTGCTGctacttaaaaatatactgcCAATTACAAATTTGCGACGTGAAGTATCTTACGAAGTGTATTGCCCTTCCTCCCGAGCTACAGTGCTTCATCTCAGACTCCCAGTTGACCAGAGATGCAGCACTGCACCTTGGGCCCGAGGACTGTAGGGGCGAATGAATCATGCGGGActccttttgttttttccatCTTACCGTCTTTGATCATCATGGACTATGACCTCCCACGTCCTGTTGATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151022 True 867 lncRNA 0.37 2 25115870 25116759

Neighbor

gene id symbol gene type direction distance location
csnk1a1 csnk1a1,LOC106611977,LOC107593197,LOC107554841,LOC107742481,LOC106604944 coding upstream 6303 25092111 ~ 25109567 (+)
sil1 LOC107740135,LOC107680960,LOC107742487,LOC107680335,LOC107580120 coding upstream 29311 25083816 ~ 25086559 (+)
spdl1 spdl1,zgc:171223,LOC107742485,LOC107680346 coding upstream 32411 25074604 ~ 25083459 (+)
gsr gsr,LOC107740139,LOC107593200,LOC107742476,LOC107680343,LOC107554844,LOC107680979 coding upstream 47443 25060085 ~ 25068427 (+)
zgc:101583 LOC107554838,LOC107680947,LOC107742473,LOC107554836,LOC107740185,LOC107680341 coding upstream 60946 25051819 ~ 25054924 (+)
LOC122357986 LOC107749198,LOC107684185,LOC107596683 coding downstream 721032 25837791 ~ 25841644 (+)
LOC122357974 NA coding downstream 773313 25890072 ~ 25897581 (+)
xrcc1 xrcc1,LOC107737754,LOC107677402,LOC107565304 coding downstream 782357 25899116 ~ 25917595 (+)
drd2l drd2l,LOC107673327,LOC107738867,LOC107565303,LOC108431000,LOC107724766 coding downstream 802507 25919266 ~ 25936250 (+)
LOC122357978 LOC107565302 coding downstream 819875 25936634 ~ 25944086 (+)
G102069 NA non-coding upstream 537341 24578203 ~ 24578529 (+)
G102068 NA non-coding upstream 538364 24577188 ~ 24577506 (+)
G102019 NA non-coding upstream 845502 24270051 ~ 24270368 (+)
LOC122358238 NA non-coding upstream 1165305 23949157 ~ 23950565 (+)
LOC122357577 NA non-coding upstream 1757178 23267299 ~ 23358692 (+)
G102164 NA non-coding downstream 326215 25442974 ~ 25465122 (+)
G102168 NA non-coding downstream 349561 25466320 ~ 25502146 (+)
LOC122357820 NA non-coding downstream 399583 25516342 ~ 25530371 (+)
LOC122357405 NA non-coding downstream 600634 25717393 ~ 25720928 (+)
G102209 NA non-coding downstream 635020 25751779 ~ 25752136 (+)
LOC122358267 LOC107593202,LOC107740141,LOC107680337,LOC107554835,LOC108268827,LOC105904295 other upstream 56670 25057752 ~ 25059200 (+)
G102017 LOC107680957,LOC107593209,LOC107740154,LOC100534741 other upstream 899107 24216243 ~ 24216763 (+)
tmem35 tmem35a,tmem35,LOC107680989,LOC107740187,LOC107724834,LOC107688707 other upstream 1026348 24086724 ~ 24089522 (+)
nitr14b NA other upstream 1143621 23970152 ~ 23972249 (+)
neil3 neil3 other upstream 2527337 22584190 ~ 22588533 (+)
G102332 wdtc1,LOC107738793,LOC107673335 other downstream 916220 26032979 ~ 26035638 (+)
gnrhr3 LOC107567517,LOC107673322,LOC108436550,LOC105908885 other downstream 1051799 26168558 ~ 26175734 (+)
khdc4 kiaa0907,LOC107570803,LOC107565361,LOC107679549 other downstream 1257574 26374333 ~ 26383784 (+)
LOC122357543 vps13b,LOC107570792,LOC107671824 other downstream 1284768 26401527 ~ 26429629 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G5951 NA non-coding CI01000000 null 9024026 ~ 9035613 (-)
rainbow trout (Oncorhynchus mykiss) G5254 NA non-coding NC_048565.1 CM023219.2 6495935 ~ 6496491 (-)
bowfin (Amia calva) G107098 NA non-coding CM030133.1 CM030133.1 26277374 ~ 26292447 (+)
tiger barb (Puntius tetrazona) G90454 NA non-coding NC_056711.1 CM032080.1 3176618 ~ 3178560 (-)
tiger barb (Puntius tetrazona) G90802 epas1,LOC107586486,LOC107727363,LOC107699276,LOC107589559,LOC107708405 non-coding NC_056711.1 CM032080.1 4545021 ~ 4570758 (-)