G104019


Basic Information

Item Value
gene id G104019
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 6179424 ~ 6180800 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU153596
CGGCGTCTGGCCAGAGATGCTGTGAGCTGCAACATGAGGGCACTGGGACTGATCGTCATGACTCTGCTGCTGCTGACGGCGGGTGAAGCTGAAGACGCAGATGTGCAGGGCTGGACGTGCGGCTATCGGGGGCTGTGCAGGAAGCACTGCTACGCTCAGGAGTACATGATCGGATACCACGGGTGCCCTCGGAGATACAGgtgcTGTGCTTTGCGTTTTTAACCACGAAGAAGCAGCCCCCGTTTCCCAAGACGGCACGCAGAACCTCTTCTTCCTCAGAACATTAGAAATGCCGTGCTGATTTACGAATGTTCGCATGTTGTCTTGTCGATAACGTAGCATGCAGACGCTTTCCAGTTTGCGAAATTCTCCAGAGCAAAACCTGCTCTGCGAACTTCTCACAAAACGGAGCGCATTTCGGTAAACGTGACCGCACCTGAAGAATGATGTCCGCTGCAGAACGTCACCGCCCcgataaaaacacagcaaaagtTACAGCTGATAAGAGCTGTCTAGAGGACCAGCCGGTATGTAGTCGAGATAGATTGatctattgtttattattagaCACGCAGTAGTGGGTTTGGTATTTGCTCTAATTGGATTAATGGAGAAAGCGGCTCAGCTTTGGTTTGACCTGCATCGAGCAACAAGAGTTCACTGACCTACATAGGCCTATCTAGTAACGGCCAGCAAACTATCCCCTCCGACGCTTAGAGAGCAAATGCAAGTTTAATGTCTTTTTACAGTTCGGTCATGAAGCAGCTGGATTGCTGAATGCTttgtgttgtcatttttttgatattttgattaaataaaatgagctATTGAAgaaatatgtactgtttattaaaatgtatatatatatatagtgtgtatatatatatatatatatatatatatatatatatata

Function

GO:

id name namespace
GO:0032400 melanosome localization biological_process
GO:0051875 pigment granule localization biological_process
GO:0051648 vesicle localization biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU153596 True 914 lncRNA 0.45 3 6179424 6180800

Neighbor

gene id symbol gene type direction distance location
lipt2 lipt2,LOC107677087,LOC107684031,LOC107720748 coding downstream 14725 6162754 ~ 6164699 (-)
eif4h eif4h,LOC107704308,LOC107744028 coding downstream 182494 5986535 ~ 5996930 (-)
rffl LOC107720964,LOC107744027,LOC107704306 coding downstream 195168 5966954 ~ 5984256 (-)
tfdp2 tfdp2,LOC107680101,LOC107720963,LOC107704305,LOC107744026 coding downstream 218536 5926061 ~ 5960888 (-)
atp1b3b atp1b3b,LOC107704304,LOC107680094,LOC107720962,LOC107563006 coding downstream 254970 5903705 ~ 5924454 (-)
LOC122359410 abcg1,LOC107684024,LOC107561305,LOC107723828,LOC108426925,LOC107755138,LOC107677096,LOC108277612 coding upstream 62121 6242921 ~ 6255555 (-)
zmp:0000001236 maml2,LOC107598561,LOC107744020,LOC107714095,LOC107555004 coding upstream 168686 6349486 ~ 6394220 (-)
LOC122358910 cdkl1,LOC107551271,LOC107680089,LOC107598661,LOC108424097,LOC105890602,LOC107703957 coding upstream 216989 6397789 ~ 6412695 (-)
LOC122359416 NA coding upstream 362068 6542868 ~ 6548235 (-)
LOC122359418 NA coding upstream 401996 6582796 ~ 6604213 (-)
G104015 spcs2,LOC107677086,LOC107567375 non-coding downstream 2182 6175599 ~ 6177242 (-)
G104010 rnf169,LOC107684027,LOC107755140,LOC107677086,LOC107726617,LOC107567382 non-coding downstream 5970 6169468 ~ 6173454 (-)
G104009 NA non-coding downstream 57503 6121614 ~ 6121921 (-)
G104007 NA non-coding downstream 59284 6119865 ~ 6120140 (-)
LOC122358585 NA non-coding downstream 231162 5947053 ~ 5948262 (-)
G104225 NA non-coding upstream 187002 6367802 ~ 6429761 (-)
G104236 NA non-coding upstream 245129 6425929 ~ 6428137 (-)
G104240 NA non-coding upstream 283564 6464364 ~ 6464861 (-)
LOC122358561 NA non-coding upstream 305012 6485812 ~ 6486966 (-)
G104249 NA non-coding upstream 307998 6488798 ~ 6489501 (-)
G104011 NA other downstream 32907 6146173 ~ 6146517 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 378343 5794803 ~ 5801081 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044,LOC107569072 other downstream 429673 5737456 ~ 5749751 (-)
G103825 NA other downstream 740477 5438048 ~ 5438947 (-)
LOC122359119 NA other downstream 1470344 4707814 ~ 4709080 (-)
mmp28 mmp28 other upstream 930456 7111256 ~ 7119286 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other upstream 1389046 7569846 ~ 7572090 (-)
G104628 NA other upstream 1458844 7639644 ~ 7640339 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 1777036 7957836 ~ 7958231 (-)
nipsnap2 gbas,LOC106581053 other upstream 1864022 8044822 ~ 8050710 (-)

Expression


Co-expression Network