LOC122359418


Basic Information

Item Value
gene id LOC122359418
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 6582796 ~ 6604213 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259711.1
ATGGTCCTTATATGGATTTGGTTGCGCTCAAGGGGAGACTTGTCTAAAGTGGTGTGTTTAGTGCGGAGCGGAGATTTAGCCATGGTGTTTGTCAGTGGTAGCTGTGTTCAGGACGGAAAGggTGAAGTTTGGGTAGGTGTGCGTCCTGCTTTGCCAGTGGATGGTGTCTCTATGATCCTGGGAAATGACATTGCAGGTAGTAGAGTTTGGGCTGATGTTCCTCCTCCTGCCCAGATGCAAGGGGACTGGGAGGAAGCACTGCCCTGGATGCTGTTGTCTGCTCGTGAGGTGGTCCAGGAGAGTACAGACTTTAGCCCAAATGACCTTGTTTTTGGTCATAAGGTTCGGGGCCCCCTAGCACTGTTGAAGGACGGCTGGACAGAGTCAGATCCGCCAAGAAGTCTTGAGACTTTAAcacagtctgtgtttaaccGTCTGTCATCATTCAGTCAGTATGGAGCTCAGTCAACTTCCTCTTGTGTTCTAGGAGAAACAGTCACTCTCAGATGTGACATATATGATGAAGGAGTCACTAGCTGGAGATACTTCTGGTATAAAGAAGGTTTAGGCAGAGTTTTCAGTGATGGACAGGAACTCACAATCAGTTCTGTTACTGAGTCTGACTCAGGTGAATACTCCTGTGATGGATTTAAAGGATCGAATGGGTCTCTCCGCAGTGATGAAGTTACTCTGACAGTATCAGAAAGACCAAAACCCAAAGTGATCATTAAACCTGATCAACATGTGTTCAGAGGAGAAACAGTCACTCTCAGATGTGACATATATGATGAAGGAGTCACTAGATGGAGATACAGCTGGTATAAAGATAATTCAAGAAGTGTTTTCAGTGATGGACAGGAACACACATTCAGTTCTGTTACTGAGTCTGACTCAGGTGAATACTCCTGTGAAGGATCAGAGATCAGAGGATCACGCCGGTCACACACGAGTGATAAAGTTACTCTGAAAGTATCAGGTCTTCCTAAACTGACTCTGACAGCTGATCCTCAGAGTCCAGTGTTCACCGGAGACTCAGTTACTCTGAGATGTGAGGGGATTCAGTCACAGAATGGATGGGAGTTTCTCTGGAGAAAAGACTCAAACCCTGAATCTACTGAAGATCAAACTAAAACAATCAAACCTGAGAAAGTCTCTGATGGAGGAAAGTACAGCTGCAGAGCTCGAAGAAGAGGAAGATGTTACACAGATTACAGTAAAGCTGTAACAGTAACAGTATACGGCaaACCAAAACCCAAAGTGACCATTAAACCTGATCAACATGTGTTCAGAGGAGAAACAGTCACTCTCAGATGTGACATATATGATGAAGGAGTCACTAGCTGGAGATACAGCTGGTATAAAGATAATTCAAGAAGAGTTTTCAGTGATGGACAGGAACACACATTCAGTTCTGTTACTGAGTCTGACTCAGGTGAATACTCCTGTGAAGGATCAGAGATCAGAGGATCACGCCGGTCACACACGAGTGATAAAGTTACTCTGAAAGTATCAGATCCCAAATCAGTTTTAAGTGTTTCTCCACAGAAGTGGTTGACTGAAGGAGAtccagtgactctgatctgtgaGGTTCACAACTTCTCTACAGGCTGGACGTTCAGCTGGTTCACTTTAACTGAATCATCAGGTAAGTTATGATGTGGTTATCATCTGctctcagacagcagcagaggagcaggaggaagaTACAGGATCAGTTCTGCTGCTGTAGATCACACAGGAGTTTATGTgtgcagagcagagagagagaaatcatcTTATAAAACACAGTACAGCAACAAACAGCTGCTGTGGGTCACCGGTGTTTCTGCTCCAGTCTCTCTGAGGGTCAGTCCCAGCAGAACTCAACACTTCAgatctgactctctctctctgagctgtgaAGACCAGAGTAACTCTACTGTATGGAGAGTGAGAACATACACAGACCTCTGGGGACTGAAAGATTGTTCATCAATACCTCGAGGATCACACACAGGATCTACATGTACAATCAGTTACGTCTATACATCACTCACTGGAGTGTACTGGTGTGAGTCTGAATCTGGAGAGAAGCATCATCCTGTTAATATCACTGTACACTCTGAAGTGATTCTGGAGAGTCCTGTTCATCCTGTGACTGAAGGAGATAGTCTGACTCTACACTGTTTATATCGATACACTCCATCAAACCTCAGAGCTGATTTCTATAAAGATGGATCACTCATCCAGAATCAAACTACAGAGATGATCATCTCTCCTGTCTCAAAGTCACACGAGGGTTTCTACTCCTGCAAACACCCAGAGAGAGGAGAGTCACCCAAGAGCTGGATCTCAGTCAGACCTTCTACAGGCTCAGTATCTGAGGATCTCAAACCCATGATAATTGGAGTAACAGCAGGACTGACTGCAGTCTTCATCGTTGTCTTCTTGGTTCTGCTCTGGAGCTACAGAAACAACAAAggtctttttaattttacatcatACATTTGCAGACGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259711.1 True 2499 mRNA 0.45 13 6582796 6604213

Neighbor

gene id symbol gene type direction distance location
LOC122359416 NA coding downstream 34561 6542868 ~ 6548235 (-)
LOC122358910 cdkl1,LOC107551271,LOC107680089,LOC107598661,LOC108424097,LOC105890602,LOC107703957 coding downstream 170101 6397789 ~ 6412695 (-)
zmp:0000001236 maml2,LOC107598561,LOC107744020,LOC107714095,LOC107555004 coding downstream 188576 6349486 ~ 6394220 (-)
LOC122359410 abcg1,LOC107684024,LOC107561305,LOC107723828,LOC108426925,LOC107755138,LOC107677096,LOC108277612 coding downstream 327241 6242921 ~ 6255555 (-)
lipt2 lipt2,LOC107677087,LOC107684031,LOC107720748 coding downstream 418097 6162754 ~ 6164699 (-)
LOC122358559 NA coding upstream 26543 6630756 ~ 6631912 (-)
LOC122358587 NA coding upstream 65634 6669847 ~ 6721194 (-)
LOC122358733 LOC107598566,LOC107744048,LOC107680082,LOC107703963,LOC107551267,LOC100333734,LOC108424028 coding upstream 195163 6799376 ~ 7023464 (-)
LOC122358728 NA coding upstream 237732 6841945 ~ 6859791 (-)
LOC122358727 NA coding upstream 381117 6985330 ~ 6994184 (-)
G104249 NA non-coding downstream 93295 6488798 ~ 6489501 (-)
LOC122358561 NA non-coding downstream 95830 6485812 ~ 6486966 (-)
G104240 NA non-coding downstream 117935 6464364 ~ 6464861 (-)
G104225 NA non-coding downstream 153035 6367802 ~ 6429761 (-)
G104258 LOC107551247,LOC107599327,LOC107599328 non-coding upstream 10081 6614294 ~ 6615539 (-)
LOC122358743 NA non-coding upstream 113594 6717807 ~ 6718527 (-)
LOC122358742 NA non-coding upstream 114852 6719065 ~ 6720572 (-)
G104255 NA non-coding upstream 114858 6719071 ~ 6720975 (-)
G104294 NA non-coding upstream 202079 6806292 ~ 7036830 (-)
G104011 NA other downstream 436279 6146173 ~ 6146517 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 781715 5794803 ~ 5801081 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044,LOC107569072 other downstream 833045 5737456 ~ 5749751 (-)
G103825 NA other downstream 1143849 5438048 ~ 5438947 (-)
LOC122359119 NA other downstream 1873716 4707814 ~ 4709080 (-)
mmp28 mmp28 other upstream 507043 7111256 ~ 7119286 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other upstream 965633 7569846 ~ 7572090 (-)
G104628 NA other upstream 1035431 7639644 ~ 7640339 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 1353623 7957836 ~ 7958231 (-)
nipsnap2 gbas,LOC106581053 other upstream 1440609 8044822 ~ 8050710 (-)

Expression


Co-expression Network