LOC122358559


Basic Information

Item Value
gene id LOC122358559
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 6630756 ~ 6631912 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258416.1
AGACTTTAAcacagtctgtgtttaaccGTCTGTCATCATTCAGTCAGTATGGAGCTCAGTCAACTTCCTCTTGTGTTCTtgctgatTTCAAATATCTACTCTGAACAAACTCAAGaaaaactgaaaccCAGAGTGATCATTAAACCTGATCAACATGTGTTCAGAGGAGAAACAGTCACTCTCAGATGTGACATATATGATGAAGGAGTCACTAGCTGGAGATACTTCTGGTATAAAGAAGGTTTAGGCAGTGTTTTCAAGTATGGACAGGAACACACATTCAGTTCTGTTTCTGAGTCTGACTCAGGTGAATACTCCTGTGATAGATTTAATGGATCGAATGGG

Function

GO: NA

KEGG:

id description
ko00533 Glycosaminoglycan biosynthesis - keratan sulfate

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258416.1 True 345 mRNA 0.40 3 6630756 6631912

Neighbor

gene id symbol gene type direction distance location
LOC122359418 NA coding downstream 26543 6582796 ~ 6604213 (-)
LOC122359416 NA coding downstream 82521 6542868 ~ 6548235 (-)
LOC122358910 cdkl1,LOC107551271,LOC107680089,LOC107598661,LOC108424097,LOC105890602,LOC107703957 coding downstream 218061 6397789 ~ 6412695 (-)
zmp:0000001236 maml2,LOC107598561,LOC107744020,LOC107714095,LOC107555004 coding downstream 236536 6349486 ~ 6394220 (-)
LOC122359410 abcg1,LOC107684024,LOC107561305,LOC107723828,LOC108426925,LOC107755138,LOC107677096,LOC108277612 coding downstream 375201 6242921 ~ 6255555 (-)
LOC122358587 NA coding upstream 37935 6669847 ~ 6721194 (-)
LOC122358733 LOC107598566,LOC107744048,LOC107680082,LOC107703963,LOC107551267,LOC100333734,LOC108424028 coding upstream 167464 6799376 ~ 7023464 (-)
LOC122358728 NA coding upstream 210033 6841945 ~ 6859791 (-)
LOC122358727 NA coding upstream 353418 6985330 ~ 6994184 (-)
LOC122358868 LOC107703955,LOC107744030,LOC107598617 coding upstream 430788 7062700 ~ 7074258 (-)
G104258 LOC107551247,LOC107599327,LOC107599328 non-coding downstream 15217 6614294 ~ 6615539 (-)
G104249 NA non-coding downstream 141255 6488798 ~ 6489501 (-)
LOC122358561 NA non-coding downstream 143790 6485812 ~ 6486966 (-)
G104240 NA non-coding downstream 165895 6464364 ~ 6464861 (-)
G104225 NA non-coding downstream 200995 6367802 ~ 6429761 (-)
LOC122358743 NA non-coding upstream 85895 6717807 ~ 6718527 (-)
LOC122358742 NA non-coding upstream 87153 6719065 ~ 6720572 (-)
G104255 NA non-coding upstream 87159 6719071 ~ 6720975 (-)
G104294 NA non-coding upstream 174380 6806292 ~ 7036830 (-)
LOC122358745 NA non-coding upstream 209424 6841336 ~ 6841692 (-)
G104011 NA other downstream 484239 6146173 ~ 6146517 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 829675 5794803 ~ 5801081 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044,LOC107569072 other downstream 881005 5737456 ~ 5749751 (-)
G103825 NA other downstream 1191809 5438048 ~ 5438947 (-)
LOC122359119 NA other downstream 1921676 4707814 ~ 4709080 (-)
mmp28 mmp28 other upstream 479344 7111256 ~ 7119286 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other upstream 937934 7569846 ~ 7572090 (-)
G104628 NA other upstream 1007732 7639644 ~ 7640339 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 1325924 7957836 ~ 7958231 (-)
nipsnap2 gbas,LOC106581053 other upstream 1412910 8044822 ~ 8050710 (-)

Expression


Co-expression Network