G104258 (LOC107551247,LOC107599327,LOC107599328)


Basic Information

Item Value
gene id G104258
gene name LOC107551247,LOC107599327,LOC107599328
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 6614294 ~ 6615539 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU153968
TGAAGACCAGAGTAACTCTACTGTATGGAGAGTGAAAAGATACACAGACAGTGATCTGGAAGATTGTTCATCAATACCTCGAGGATCACACACAGGATCTACATGTACAATCAGTTACGTCTATACATCACTCACTGGAGTGTACTGGTGTGAGTCTGAATCTGGAGAGAAACATCATCCTGTTAATATCACTGTACACTCTGAAGTGATTCTGGAGAGTCCTGTTCATCCTGTGACTGAAGGAGATAGTCTGACTCTACACTGTTTATATCAATACACAACTCCATCAAACCTCAGAGCTGATTTCTATAAAGATGGATCACTCATCCAGAATCAAAATACAGAGATGATCATCTCTCCTGTCTCAAAGTCACACGAGGGTTTCTACTCCTGCAAACACCCAGAGAGAGGAGAGTCACCCAAGAGCTGGATCTCAGTCAGACCTTCTACAGGCTCAGTATCTGAGGATCTCAAACCCATGATAATTGGAGTAACAGCAGGACTGACTGCAGTCTTCATTGTTGTCTTCTTGGTTCTGCTCTGGTGCTACAGAAACAACAAAGGTcttttaattttacatcatACATTTACAGACACTGACTCTGTTCCTAATCAGCTGGTTGAGATGGTTTTCTGCTCTTAACTGGTCTCCCAAACCTGGTAAAGATGTTTTTTAGACTGAGTTTAGAAGGTTTCTAGGCAGTTTTCAactgcattcttcaaaataaaggaTCCAGAAGGTCTGCTATAAAGagctttttgttaattgaaaatTTTCCATTGACATTTATTCCCGGTTCCATTGATGCCAGTAAAGAAGTTTTATTTGAACAGGTGTTAAATCTCCTTCTAATGTGAATCCAACATCAGACCAGAACCAGAGTGACGCCGGACACAATACACTGCTGACTGGTCAGTCTTCACCCATTAACCATCAATAGATCTTTACAAACTGAGACTGAAgacattttaatgaacaaaaatattcataaaaacatttcat

Function

NR:

description
PREDICTED: leukocyte immunoglobulin-like receptor subfamily B member 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153968 True 1003 lncRNA 0.40 3 6614294 6615539

Neighbor

gene id symbol gene type direction distance location
LOC122359418 NA coding downstream 10081 6582796 ~ 6604213 (-)
LOC122359416 NA coding downstream 66059 6542868 ~ 6548235 (-)
LOC122358910 cdkl1,LOC107551271,LOC107680089,LOC107598661,LOC108424097,LOC105890602,LOC107703957 coding downstream 201599 6397789 ~ 6412695 (-)
zmp:0000001236 maml2,LOC107598561,LOC107744020,LOC107714095,LOC107555004 coding downstream 220074 6349486 ~ 6394220 (-)
LOC122359410 abcg1,LOC107684024,LOC107561305,LOC107723828,LOC108426925,LOC107755138,LOC107677096,LOC108277612 coding downstream 358739 6242921 ~ 6255555 (-)
LOC122358559 NA coding upstream 15217 6630756 ~ 6631912 (-)
LOC122358587 NA coding upstream 54308 6669847 ~ 6721194 (-)
LOC122358733 LOC107598566,LOC107744048,LOC107680082,LOC107703963,LOC107551267,LOC100333734,LOC108424028 coding upstream 183837 6799376 ~ 7023464 (-)
LOC122358728 NA coding upstream 226406 6841945 ~ 6859791 (-)
LOC122358727 NA coding upstream 369791 6985330 ~ 6994184 (-)
G104249 NA non-coding downstream 124793 6488798 ~ 6489501 (-)
LOC122358561 NA non-coding downstream 127328 6485812 ~ 6486966 (-)
G104240 NA non-coding downstream 149433 6464364 ~ 6464861 (-)
G104225 NA non-coding downstream 184533 6367802 ~ 6429761 (-)
G104236 NA non-coding downstream 186157 6425929 ~ 6428137 (-)
LOC122358743 NA non-coding upstream 102268 6717807 ~ 6718527 (-)
LOC122358742 NA non-coding upstream 103526 6719065 ~ 6720572 (-)
G104255 NA non-coding upstream 103532 6719071 ~ 6720975 (-)
G104294 NA non-coding upstream 190753 6806292 ~ 7036830 (-)
LOC122358745 NA non-coding upstream 225797 6841336 ~ 6841692 (-)
G104011 NA other downstream 467777 6146173 ~ 6146517 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 813213 5794803 ~ 5801081 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044,LOC107569072 other downstream 864543 5737456 ~ 5749751 (-)
G103825 NA other downstream 1175347 5438048 ~ 5438947 (-)
LOC122359119 NA other downstream 1905214 4707814 ~ 4709080 (-)
mmp28 mmp28 other upstream 495717 7111256 ~ 7119286 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other upstream 954307 7569846 ~ 7572090 (-)
G104628 NA other upstream 1024105 7639644 ~ 7640339 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 1342297 7957836 ~ 7958231 (-)
nipsnap2 gbas,LOC106581053 other upstream 1429283 8044822 ~ 8050710 (-)

Expression


Co-expression Network