LOC122358733 (LOC107598566,LOC107744048,LOC107680082,LOC107703963,LOC107551267,LOC100333734,LOC108424028)


Basic Information

Item Value
gene id LOC122358733
gene name LOC107598566,LOC107744048,LOC107680082,LOC107703963,LOC107551267,LOC100333734,LOC108424028
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 6799376 ~ 7023464 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258573.1
ATGTCTTTAGGCCTGGAGCTCATAGGGATCGTGTCATGTGTGCTGGGCTGGCTTTTGGCCATCGTGGCTTGTGCTCTCCCCATGTGGAGGGTCACAGCCTTCATCGGTTCCAACATCGTGACTGCTCAGATCATCTGGGACGGCCTGTGGATGTCCTGCGTGGTTCAGAGCACCGGACAGATGCAGTGCAAGGTCTATGACTCCATGCTGGCGCTCTCTCAGGACCTTCAAGCAGCTCGAGCCCTGACGGTAATCTCCATCCTTCTGACCGTCTTGGCGGTCCTGGTGTCCATCGGAGGAGCGAAGTGCACTAACTGCATTGAAGAAGAGTCGTCCAAAGCTAAAGTCATGATCTTAGGAGGAGTGCTGTTCATCGTGGCTGGGCTCATGCAGCTGATTCCCGTGTCCTGGTCTGCAAACAGCATCATCAGGGACTTTTACAACCCTTTGCTGCCGGACGCCCGGAGGCAAACTTTATTCGCGATGGCTTCAGCCGGCCTGGAGATCCTGGGGATGATCCTGACCGTGGCCGGGTGGCTTGGGGTGATGGTGGCCTGCTGCCTGCCCATGTGGAGAGTGGCGGCGTACATAGGCCAGAACATCGTCATCACGCAGATAGTGTGGGAAGGTTTGTGGATGAGCTGCGTGGTGCAGAGCACAGGACAGATGCACTGCCGCGTCTACGACTCCATGCTGGGGCTCCCCGACGACCTGCAGGCTTCTCGGGCTCTGACGGTGGTCAGCACGCTGCTCGGTGTGCTGGGCATGGCTCTGGCCGTGGCTGGGGCCAAGTGCACCAACTGCACCTCGGACGCAGCCAACAAGCCGCGCTTCATGCTGGCAGCAGGCGTGACGTTCGTAACGTGcgggctgctgctgctggtggcCGTCTGTTGGACGGCTAACGGCATCATCCTGGATTTCCACAACCCGCTTCTGGAGGAGACGCAGAAGAGGGAGTTTGGGAACTCGCTGTACTTCGGATGGGGCGCCTCCTGCCTGCTGATCCTAGGTGGAGCCATTTTGTCGTGTTCCTGCTCCTCGAAAGCGCAGAACAATGCCGTGCCGACAAGAGTGGACTACTCAGGGGTCAAATCTATGTCTGCCAATGGATATGACAGGAGAGACTATGTCTGA

Function

NR:

description
PREDICTED: claudin-9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258573.1 True 1137 mRNA 0.58 3 6799376 7023464

Neighbor

gene id symbol gene type direction distance location
LOC122358587 NA coding downstream 78182 6669847 ~ 6721194 (-)
LOC122358559 NA coding downstream 167464 6630756 ~ 6631912 (-)
LOC122359418 NA coding downstream 195163 6582796 ~ 6604213 (-)
LOC122359416 NA coding downstream 251141 6542868 ~ 6548235 (-)
LOC122358910 cdkl1,LOC107551271,LOC107680089,LOC107598661,LOC108424097,LOC105890602,LOC107703957 coding downstream 386681 6397789 ~ 6412695 (-)
LOC122358868 LOC107703955,LOC107744030,LOC107598617 coding upstream 39236 7062700 ~ 7074258 (-)
taf15 taf15,LOC107703972,LOC107728230,LOC107598573 coding upstream 96598 7120062 ~ 7126137 (-)
porb porb,LOC107728227,LOC107598574,LOC107703971,LOC107749051,LOC108424088,LOC108280677 coding upstream 104871 7128335 ~ 7150841 (-)
dock10 dock10,LOC107703970,LOC107703008 coding upstream 136872 7160336 ~ 7233359 (-)
shox2 shox2,LOC107709009,LOC107598669,LOC107703017,LOC107720426,LOC107661335 coding upstream 351749 7375213 ~ 7382108 (-)
G104255 NA non-coding downstream 78401 6719071 ~ 6720975 (-)
LOC122358742 NA non-coding downstream 78804 6719065 ~ 6720572 (-)
LOC122358743 NA non-coding downstream 80849 6717807 ~ 6718527 (-)
G104258 LOC107551247,LOC107599327,LOC107599328 non-coding downstream 183837 6614294 ~ 6615539 (-)
G104249 NA non-coding downstream 309875 6488798 ~ 6489501 (-)
G104314 LOC107680077,LOC107551265,LOC107703961,LOC107744046,LOC107598567 non-coding upstream 14262 7037726 ~ 7039192 (-)
G104252 cldne,LOC107680074,LOC107703976,LOC107598571,LOC107551262 non-coding upstream 18930 7042394 ~ 7098067 (-)
G104570 NA non-coding upstream 466642 7490106 ~ 7490776 (-)
G104572 NA non-coding upstream 473522 7496986 ~ 7497259 (-)
G104585 NA non-coding upstream 486670 7510134 ~ 7513305 (-)
G104011 NA other downstream 652859 6146173 ~ 6146517 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 998295 5794803 ~ 5801081 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044,LOC107569072 other downstream 1049625 5737456 ~ 5749751 (-)
G103825 NA other downstream 1360429 5438048 ~ 5438947 (-)
LOC122359119 NA other downstream 2090296 4707814 ~ 4709080 (-)
mmp28 mmp28 other upstream 87792 7111256 ~ 7119286 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other upstream 546382 7569846 ~ 7572090 (-)
G104628 NA other upstream 616180 7639644 ~ 7640339 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 934372 7957836 ~ 7958231 (-)
nipsnap2 gbas,LOC106581053 other upstream 1021358 8044822 ~ 8050710 (-)

Expression


Co-expression Network