G105022 (LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388)


Basic Information

Item Value
gene id G105022
gene name LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9434426 ~ 9436797 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU155103
AGccgtttaaaataatttttttccatttattaagataataaataacagatgagctctacaaatataaaacacgCCGATTGCAACTTTGTATACACTGGAATATCACGACACGCGATACGATTTCATTGTTGCATTAACACGCACGCGAttgcactaaaaataaacaatatgaaaatatatacatatatacacaaataccgAATCGTTTTTACTTACAACGCAATTTCTTCGCAGGCTTCACCTCTACGTTTTATGTGCATCTTACAAGCTGCATTAAATCacaatgcagtttatttttttgaagatcAACCGTATCAATTCAACCTTCGAAagccaaacttttttttttttaatccataagCAATATTGCAAATTCATATCAAGGTGCATTTCCGATTCAGTCATATTCACTCTCAGCAATTCACTGCTGTCTGCAGCACACCAAGTGTCACAGACGCACATAGTCTTTCTAGTCTTCACGAAGGTAGGCCTCTGGAATATCTTCCAGATCGTTGATGTCGATGCTGGAGGCGTATTCAGCCATTCTCTGGATTTCCTCTGCTTTCGTTTCGGCCAGCTTCTTCTCCGCCTCTTTGGAGATCTTTCTAAGCTCTTCCACTTTGCACTGTGCCACCTGCAGATTGGCTTTTGTTGCCGTGCACGCATGCTCTGCTCCTGTTAAATATCAAAGTTGAATCAATTCGCAGACCAGACCGGagtcataaatgtttttgtttttttgtcttaagcCTAATAATTGAAGGAAAATGTATTAACGTACCCGAATTGTAGGCTGCTTCTGCTGACAACTCACTGATGTTGATAGCATTCACCCAATTCGACTCAAAGCGTTTACATTCCTCCAATCTATCactaacctttaaaaaaaaaaaaaaaacaacaacacattgaCCACTCTGAAATCAAGTGTTCTCTTAAATATAACTAAGCTACCGTGATATGCACAAGATAATTAAGATCTATAATGTAAATAACACTTTGATAAACTAAAACAGACCTTGCtctacaaaaagtaaataaacattttaaaggaacagaatTTACCTCCACACGCTGGCCAATGATCACCTGCCAAATGCTGTCCTCTTCAGCAGGGGACAGTTTTCCTATTGAATTAATGTATCGCTTCTGAAGGGCAACGAGTGTATGTAGTGCCTGAGAAAGGTAGATACGGTAAACATTACTTCATTTATATTCAACTTAAACCTTTGTCAGCAATCAAGGGATCCACTAATCGCCAAGACAGGTTTAGCAAGTGCACTACGGGTTATAAATGCAGCGTTTATGAGTCTTACCTTGGCATATTGTGTGAGGGCATCTACAAGAGCCAGCGTGGTCTGAGAGAGATAAGTGTTGGCGCTGTCTGTGACCAGACACGAGGCCCGGCGAATCAGGGATTCGTGTGAGAGGTTTTCAACctgctgcagaaaaaaaaagaggatgcATTTTATTACACTCTTGTCACAAGGGTGCAAAACATAAATCaagtttaaacataaaatacataaaacaaacctACTGCTCGACAAGTGCAGCGTGATTCTAAAGAGTCGATtcttttttagtgaatcaacattaataaaaatgattcgGATGGTCGATTAAAAAATCCTTATAGCTCTAGTCTCATCATGTTTCCTTGTAAAAAGTAGTATACTagaaaaaatacaacaacaatagGTTTAATTACCtctgcctttttaaataaatatttctgatttgttgttgttttaatttgcattaaagcagcattcaataaaaacaaatcggTTGTCAAAATGATTAATGCGAGAATAACCGAATCAATCTCCATATCCATACAAACGCACGTTGTTACGCTTTTTTAGTTTCCCATTTGCTCACAGTCTGTAGCTTGCGTGTAGCATTTAAAACGTTTATGCCTTGAGTTAGTTACCTGTGTGAAAGGGACCGCGCAGAGGCTGCTGCCGAGGCTGAACGCGGCTGTGTTGGATCGGGCGACCTCCGGCAGGCGCAGGAGACGCTGGTGAACCGGGCTCCTGCAGAGCACCGCAGCCTTGTTCCtgtaatataagaaaataaatcaggCTGAAAATAACGCCGCAACACCCCTCTGCCActactttttttgcGAAGCTGAACGCATGCGGCGCTCAGGCGCAAGACCGCCATGTTTCTTCTAGCGAGCAGGAAGTCGGTCCGGCCTTTAAGAAGGCTCCCATTAGCGCACAAACCGCACTTTCTAAAAGCCTGCATATCGCCTTACAGTCTTTTACTAACAGTGATAAAATACTTAGGTGTATCCCTTTAGCCCGTGTTTGTCTTTAAGCAAAGCTTTTCGATGT
>TU155104
AGccgtttaaaataatttttttccatttattaagataataaataacagatgagctctacaaatataaaacacgCCGATTGCAACTTTGTATACACTGGAATATCACGACACGCGATACGATTTCATTGTTGCATTAACACGCACGCGAttgcactaaaaataaacaatatgaaaatatatacatatatacacaaataccgAATCGTTTTTACTTACAACGCAATTTCTTCGCAGGCTTCACCTCTACGTTTTATGTGCATCTTACAAGCTGCATTAAATCacaatgcagtttatttttttgaagatcAACCGTATCAATTCAACCTTCGAAagccaaacttttttttttttaatccataagCAATATTGCAAATTCATATCAAGGTGCATTTCCGATTCAGTCATATTCACTCTCAGCAATTCACTGCTGTCTGCAGCACACCAAGTGTCACAGACGCACATAGTCTTTCTAGTCTTCACGAAGGTAGGCCTCTGGAATATCTTCCAGATCGTTGATGTCGATGCTGGAGGCGTATTCAGCCATTCTCTGGATTTCCTCTGCTTTCGTTTCGGCCAGCTTCTTCTCCGCCTCTTTGGAGATCTTTCTAAGCTCTTCCACTTTGCACTGTGCCACCTGCAGATTGGCTTTTGTTGCCGTGCACGCATGCTCTGCTCCTGTTAAATATCAAAGTTGAATCAATTCGCAGACCAGACCGGagtcataaatgtttttgtttttttgtcttaagcCTAATAATTGAAGGAAAATGTATTAACGTACCCGAATTGTAGGCTGCTTCTGCTGACAACTCACTGATGTTGATAGCATTCACCCAATTCGACTCAAAGCGTTTACATTCCTAACACTTTGATAAACTAAAACAGACCTTGCtctacaaaaagtaaataaacattttaaaggaacagaatTTACCTCCACACGCTGGCCAATGATCACCTGCCAAATGCTGTCCTCTTCAGCAGGGGACAGTTTTCCTATTGAATTAATGTATCGCTTCTGAAGGGCAACGAGTGTATGTAGTGCCTGAGAAAGGTAGATACGGTAAACATTACTTCATTTATATTCAACTTAAACCTTTGTCAGCAATCAAGGGATCCACTAATCGCCAAGACAGGTTTAGCAAGTGCACTACGGGTTATAAATGCAGCGTTTATGAGTCTTACCTTGGCATATTGTGTGAGGGCATCTACAAGAGCCAGCGTGGTCTGAGAGAGATAAGTGTTGGCGCTGTCTGTGACCAGACACGAGGCCCGGCGAATCAGGGATTCGTGTGAGAGGTTTTCAACctgctgcagaaacctACTGCTCGACAAGTGCAGCGTGATTCTAAAGAGTCGATtcttttttagtgaatcaacattaataaaaatgattcgGATGGTCGATTAAAAAATCCTTATAGCTCTAGTCTCATCATGTTTCCTTGTAAAAAGTAGTATACTagaaaaaatacaacaacaatagGTTTAATTACCtctgcctttttaaataaatatttctgatttgttgttgttttaatttgcattaaagcagcattcaataaaaacaaatcggTTGTCAAAATGATTAATGCGAGAATAACCGAATCAATCTCCATATCCATACAAACGCACGTTGTTACGCTTTTTTAGTTTCCCATTTGCTCACAGTCTGTAGCTTGCGTGTAGCATTTAAAACGTTTATGCCTTGAGTTAGTTACCTGTGTGAAAGGGACCGCGCAGAGGCTGCTGCCGAGGCTGAACGCGGCTGTGTTGGATCGGGCGACCTCCGGCAGGCGCAGGAGACGCTGGTGAACCGGGCTCCTGCAGAGCACCGCAGCCTTGTTCCtgtaatataagaaaataaatcaggCTGAAAATAACGCCGCAACACCCCTCTGCCActactttttttgcGAAGCTGAACGCATGCGGCGCTCAGGCGCAAGACCGCCATGTTTCTTCTAGCGAGCAGGAAGTCGGTCCGGCCTTTAAGAAGGCTCCCATTAGCGCACAAACCGCACTTTCTAAAAGCCTGCATATCGCCTTACAGTCTTTTACTAACAGTGATAAAATACTTAGGTGTATCCCTTTAGCCCGTGTTTGTCTTTAAGCAAAGCTTTTCGATGT

Function

NR:

description
PREDICTED: diablo homolog, mitochondrial-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155103 True 2345 TUCP 0.40 2 9434426 9436797
TU155104 False 2130 TUCP 0.41 4 9434426 9436797

Neighbor

gene id symbol gene type direction distance location
or95a1 or129-1,LOC107561372,LOC107672365 coding downstream 13856 9419067 ~ 9420570 (-)
p4ha3 p4ha3,LOC107672412 coding downstream 19478 9408846 ~ 9414948 (-)
trnat-agu_65 NA coding downstream 38823 9395530 ~ 9395603 (-)
trnaa-ugc_117 NA coding downstream 39116 9395237 ~ 9395310 (-)
trnar-ucu_51 NA coding downstream 39373 9394964 ~ 9395053 (-)
rrp8 rrp8,LOC107752393 coding upstream 57251 9494048 ~ 9497634 (-)
ywhag2 ywhag2,LOC103021402,LOC107582613,LOC101160255,LOC107694031,LOC100700540 coding upstream 94086 9530883 ~ 9535116 (-)
proca1 proca1,LOC107758694,LOC107582608,LOC107672398,LOC107694032,LOC107752378,LOC107592754 coding upstream 123495 9560292 ~ 9565762 (-)
rab34a rab34a,LOC107758713,LOC107672399,LOC107657101 coding upstream 131863 9568660 ~ 9572734 (-)
synrg synrg,LOC107713459,LOC107554286,LOC107582605,LOC107727910 coding upstream 279902 9716699 ~ 9760170 (-)
G105019 si:ch211-24o8.2,LOC107672367,LOC107582655,LOC107758805,LOC107752394,LOC107694021,LOC107588807 non-coding downstream 2295 9424230 ~ 9432131 (-)
G105020 NA non-coding downstream 10500 9421089 ~ 9423926 (-)
G104976 NA non-coding downstream 40218 9393877 ~ 9394208 (-)
G104975 NA non-coding downstream 42186 9392033 ~ 9392240 (-)
LOC122358921 NA non-coding downstream 138915 9264495 ~ 9295511 (-)
LOC122359087 NA non-coding upstream 102794 9539591 ~ 9541822 (-)
G105055 NA non-coding upstream 105519 9542316 ~ 9543148 (-)
G105062 NA non-coding upstream 115124 9551921 ~ 9552439 (-)
G105269 NA non-coding upstream 261719 9698516 ~ 9698735 (-)
G105272 NA non-coding upstream 267939 9704736 ~ 9705004 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 388311 9038896 ~ 9046115 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other downstream 771562 8657688 ~ 8662864 (-)
zgc:114130 zgc:114130,LOC107758457,LOC107749642,LOC107678256,LOC107560624,LOC107684198,LOC107561367 other downstream 920967 8510382 ~ 8513459 (-)
nipsnap2 gbas,LOC106581053 other downstream 1383716 8044822 ~ 8050710 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other downstream 1476195 7957836 ~ 7958231 (-)
G105059 NA other upstream 115837 9552634 ~ 9555787 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other upstream 327074 9763871 ~ 9796923 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 1075834 10512631 ~ 10514062 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other upstream 1222137 10658934 ~ 10663588 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 1636484 11073281 ~ 11506177 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G361635 NA non-coding CI01000154 null 1429409 ~ 1467108 (+)