LOC122358921


Basic Information

Item Value
gene id LOC122358921
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9264495 ~ 9295511 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252658.1
ATTAAGACGCCCAGAAGATAACCGCGGTGTCTTTATTACAAACCCGCAAGAGAAGATGGCACGTGGCGGTGTTTAAAGCGCGGTTCATATAATCCCCGGATGTACTGTCAGCGGATGACCAGATGATGTCAGACTCTTCAAGAAAGTAGACCGAAGTGCCTCGTGCTGAAAAACACCACGTGCAGCCTAAAGACGGCTAGTTTGGGGACTTCGTCTCCAAATTCAGCTGCTTTCTCGCTGTTGCTGCGACTTTAACGTCATAAACACGTCTTAAGCGTCGATCAAGATGGCGGAGAAAGCGTGTGCCGGGACGCAGCATTCTGCCGTGTTTACTGAAATAGgAGAGGATGGTGTACAGCAGTCAGAAAGCAAAGTGAAGGGGTGGAGTCTGGACTCGAACTCGGGACGCCTTTAATGCAATTGGTGCACTAGGCTACTGACACCGACGTTATCAGCCATTTTGTTCCAGGAATATTAACCCAGCCATCAAACCTGATCTCCCGAGAAGAGCGCCACCTACAGCATCGGAGAAATGTGCGTTTACGATCAGTGGGATGGATTtaggatggattttttttacactctcTGACACAAACTGGTTTAAGGTAATAAAACAAGATGGGCCTGCTTGAAGCGAAGACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252658.1 True 643 lncRNA 0.48 3 9264495 9295511

Neighbor

gene id symbol gene type direction distance location
polr2h polr2h,LOC107668490 coding downstream 12554 9249918 ~ 9251941 (-)
mfsd8l1 LOC107732668,LOC107668499,LOC564731,LOC107668664,LOC107731658,LOC107558711 coding downstream 15841 9238021 ~ 9248654 (-)
trnat-agu_25 NA coding downstream 233510 9030912 ~ 9030985 (-)
trnat-cgu_10 NA coding downstream 233810 9030612 ~ 9030685 (-)
trnar-ucu_22 NA coding downstream 234065 9030341 ~ 9030430 (-)
ncl NA coding upstream 1590 9297101 ~ 9303873 (-)
nppc LOC107570460,LOC107668654,LOC107668494,LOC107732656,LOC107574759 coding upstream 15575 9311086 ~ 9313456 (-)
trnat-agu_26 NA coding upstream 40689 9336200 ~ 9336273 (-)
trnag-ucc_3 NA coding upstream 41009 9336520 ~ 9336609 (-)
trnat-ugu_12 NA coding upstream 41537 9337048 ~ 9337121 (-)
G104936 NA non-coding downstream 29408 9234870 ~ 9235087 (-)
G104922 NA non-coding downstream 124073 9140058 ~ 9140422 (-)
LOC122359047 NA non-coding downstream 226167 9032599 ~ 9038328 (-)
G104809 LOC107672361,LOC107758746 non-coding downstream 535508 8716395 ~ 8728987 (-)
G104812 clca4,LOC107749647,LOC107678235,LOC107678236,LOC107749648,LOC107678237 non-coding downstream 562453 8595677 ~ 8702042 (-)
G104975 NA non-coding upstream 96522 9392033 ~ 9392240 (-)
G104976 NA non-coding upstream 98366 9393877 ~ 9394208 (-)
G105020 NA non-coding upstream 125578 9421089 ~ 9423926 (-)
G105019 si:ch211-24o8.2,LOC107672367,LOC107582655,LOC107758805,LOC107752394,LOC107694021,LOC107588807 non-coding upstream 128719 9424230 ~ 9432131 (-)
LOC122359087 NA non-coding upstream 244080 9539591 ~ 9541822 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 218380 9038896 ~ 9046115 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other downstream 601631 8657688 ~ 8662864 (-)
zgc:114130 zgc:114130,LOC107758457,LOC107749642,LOC107678256,LOC107560624,LOC107684198,LOC107561367 other downstream 751036 8510382 ~ 8513459 (-)
nipsnap2 gbas,LOC106581053 other downstream 1213785 8044822 ~ 8050710 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other downstream 1306264 7957836 ~ 7958231 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other upstream 138915 9434426 ~ 9436797 (-)
G105059 NA other upstream 257123 9552634 ~ 9555787 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other upstream 468360 9763871 ~ 9796923 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 1217120 10512631 ~ 10514062 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other upstream 1363423 10658934 ~ 10663588 (-)

Expression


Co-expression Network