LOC122358646 (LOC107756729,LOC107685095,LOC107589721)


Basic Information

Item Value
gene id LOC122358646
gene name LOC107756729,LOC107685095,LOC107589721
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 15819666 ~ 15823571 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258519.1
TCGTTATGCAGAGACCTTAAACCGTCAATGTCATTAACTCGAAAccaaaacgtttttgtttgcttgctgtGAATCGGTTTAAAGGAAAGGTCGAGTGTAACTTGAAGCATGGATATACTGTCGGCACTGAAGGCGAACGCGGTGTCTGTTATCATGGCTGTCTTGGCTCTGTTATTGTTGTGGAAGATTCGAGGAAAGCAGAGCGGTTTTGAGCGGCTGCCTCCAGGACCTGCGCCTAATCCACTGCTGggaaatttatttcagtttaatatcAAGGAAGCATACGCTTATTATTTAGAGCTGAGTAATACTTATGGCTCTGTTATTACCATCTGGCTGGCAAACACTCCTGTGGTGATCATTTCTGGATATCAAGCCCTAAAGGATACTATGATTGGTCTCGGTGAAGAATTCAGCGGCAGGGCCATCTATGCCCTGTTAATGAAGTCTACTTACGGATATGGGGTTTTGTCCACAAGTGGAGACCGTTGGAAGGAAATGCGCAAATTCACTCTTACGACACTGAAGAGCTTTGGAATGGGCCGCAGGAGCATTGAAGTGCAAGTCAGGGAGGAGGCTGAGAATCttgtagaaatgtttaaaaaatgtgaagGCTCTGCATTCAACCCTGCAAAAATGCTTATGAATGCTGTAAGCAATGTGATCTGCAGCATTGTCTTCGGGCATAGGTTTGAACCTGAGGATCCACAGTTTAAGTCTCTCATTCGGACCGTAAATACTTACTTCAGTATTCTCAGTAGTCCTCTTGGACAGatcTATAATATATTCCCTAGGTTAGTCAGCCTCTTTCCCGGTAAACACCATCAGCTGTTTAAAGACCTAGAAGAGGCCAGGGAGTATTGCAAGCATGAGGCACAGGCTCGGATGAATATTCCGGACCTCTCCTGCCCGCAGGACTTCATTGAGGCCTTTGTACTAAAAATGAAAGAGGAGAAAGACAAGCCTAACACAGAATATCATTTTGGCAACTTGATTTCTGTGGTGTGGAACTTGCTCAGTGCCGGCACAGAAACTACTTCATCCACCGTCAGACACGCTTTGCTTCTGATGATGAAGCACCCAGACATTCAAGAGCGTGTTCAGAGGGAACTTGATGAGGTTGTAGGACAGGAGCGTTGGCCCTCAGTAGAGGACAGACAAAACCTGCCGTATACAGATGCTGTAATCCATGAGATTCAGCGCCATATGGATCTCGCCCCCATCGCTATCCCCCACAAGATGatgtgtgacactgaatacaACGGTTATGTCATTCCTAAGggGGTCATGGTTTTCCCACTGCTATCATCTGTGCTTATAGATCCGAAACTGTGGAAGAACCCAAATTGCTTTTATCCAGAGAACTTCTTGGACGCAGATGGTCGATTTCAGAAAAACGATGCATTTGTTGTATTTGGCATGGGCAAGCGTGCGTGTATTGGTGAGGCTTTGGCTCGTATAGAGCTGTTTATCTTCTTCACGTCCCTCCTTCAgcacttcacctttaaagcCACAGTGCCACCAGAGGAGCTCAACACAACACCAACAAATTGCAGTTTTGGCCGCATGCACACATATGAATGCTTTGCCATTCCCAGGAAATAG

Function

NR:

description
PREDICTED: cytochrome P450 2M1-like

GO:

id name namespace
GO:0005783 endoplasmic reticulum cellular_component
GO:0031090 organelle membrane cellular_component
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258519.1 True 1605 mRNA 0.46 10 15819666 15823571

Neighbor

gene id symbol gene type direction distance location
LOC122359368 unc119b,LOC107704800,LOC107713212,LOC107675204,LOC107731972 coding downstream 177323 15637175 ~ 15642343 (-)
LOC122359366 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 coding downstream 204409 15608793 ~ 15615257 (-)
gpr4 gpr4,LOC107669721,LOC107743733,LOC108278409 coding downstream 217348 15585041 ~ 15602318 (-)
polr1g LOC107669720 coding downstream 240330 15577141 ~ 15579336 (-)
blmh blmh,LOC107548589,LOC107743628,LOC107669757,LOC107589715,LOC107685090,LOC107756769 coding downstream 308391 15496803 ~ 15511275 (-)
dharma LOC107714161,LOC107548561,LOC107669726 coding upstream 14727 15838298 ~ 15839438 (-)
zgc:162698 LOC107669731,LOC107714191,LOC107756677,LOC107682388 coding upstream 55016 15878587 ~ 15888593 (-)
si:dkey-52l18.4 LOC107666186,LOC107588402,LOC107714160 coding upstream 145783 15969354 ~ 15977058 (-)
tsku tsku,LOC107666203,LOC107682449,LOC107589732,LOC107587631,LOC107714182 coding upstream 153600 15977171 ~ 15982902 (-)
serpinh1b serpinh1b,LOC107588392,LOC107666206,LOC107756564,LOC107682478,LOC107589735 coding upstream 174530 15998101 ~ 16002164 (-)
G107073 LOC107756729,LOC107589721,LOC107685095,LOC107548592 non-coding downstream 158734 15660060 ~ 15660932 (-)
G107055 nova2,LOC107669728,LOC107589717,LOC103039352,LOC107685091,LOC107548550 non-coding downstream 166856 15532081 ~ 15652810 (-)
LOC122359369 NA non-coding downstream 201061 15616118 ~ 15618605 (-)
G107053 NA non-coding downstream 343185 15474460 ~ 15476481 (-)
G107034 NA non-coding downstream 425589 15390240 ~ 15394077 (-)
G107090 NA non-coding upstream 5117 15828688 ~ 15831181 (-)
G107205 NA non-coding upstream 248321 16071892 ~ 16072101 (-)
G107208 LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 non-coding upstream 291976 16115547 ~ 16120552 (-)
LOC122358383 NA non-coding upstream 318426 16141997 ~ 16148738 (-)
G107217 NA non-coding upstream 340870 16164441 ~ 16284176 (-)
G107064 eml2,LOC107669753,LOC107548590,LOC107743713,LOC107685092 other downstream 37655 15776508 ~ 15782011 (-)
LOC122359058 dph1,LOC107585615,LOC107664954,LOC107685060 other downstream 1497227 14298251 ~ 14322439 (-)
mmp20a NA other downstream 1810380 14003741 ~ 14009286 (-)
cluha cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 other downstream 1893939 13908806 ~ 13925727 (-)
G106571 lis1a,pafah1b1,LOC107664934,LOC107743664,LOC108431306,LOC103047044,LOC107585584 other downstream 1914172 13883920 ~ 13905494 (-)
xaf1 LOC107714184,LOC107578343 other upstream 83791 15907362 ~ 15910474 (-)
ly6d si:ch211-207n23.2,LOC107587620,LOC107683433,LOC107666183 other upstream 131438 15955009 ~ 16063740 (-)
LOC122359003 LOC107714165,LOC107588126 other upstream 589065 16412636 ~ 16426414 (-)
msi2b msi2b,msi2,LOC108425902,LOC107682662,LOC108435815,LOC108277875,LOC107587484,LOC105028669,LOC106603292 other upstream 727620 16551191 ~ 16762064 (-)
nf1a nf1,nf1a,LOC107682681,LOC107672107 other upstream 961454 16785025 ~ 16841738 (-)

Expression


Co-expression Network