LOC122360857


Basic Information

Item Value
gene id LOC122360857
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 18797261 ~ 18798074 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261704.1
CTTCTTCAGGTAAACATCACTGGGAAAGGCTCTTTCCTCCGCACACAATGGCTGAAAATGAGATCTTAGAAGACCAAGAGGAGAAGCTGAAGAGGGGTCTGGTGAAGGTTCTGGAATGCGTGGCCCCATCTGCGTCCGCAGCAGCGGTGGTCAATCTCTTCGGCGTGGCTGGATCTCTCATCGGTGGTGCTGCACCACGCGTGGGCGACGAGGACATCCAGAAACTCAAGCGCGAGTTCGGCGGCGTGAATCGGGCAATCGGCGAAATCTCACAGCAGAACCAGAACGTCTTGCTTCTGATCCGGAAGGAGACCGTGGGCGGCCTGTACTGTCGTGAAGAAAACATCCGTAATCAGTTCTCCAAATTCATGGACACAGTGGAAATATCGTGGCACATGAACACACGCAAGAAAGAGTTCGAGATGAGCTTTGTGGTCAATCAGTGTGACCAGAACATACACGCTGTGCACGGCGGGGTGTTGGCGAGACCAAGCTCTTCAGTCAGCCCATCCTGAGGCGTCTACATGAAGCACTGCGAGGTGACCAGCGGCGTCATGAAAACCCTCTGCACTCGACTCACGTGCCTGTTCTGCATCGGCCTCATTGCTCTGATGAGTTACGCTGCCATCGTCGGGGATGATGAAGAAGCTCTGCGCATCGAGTGGGAAAAAATGACAGGCGTGGCCAGAAAGATGTCAAGAAGTGTTAAAGTTATGAGTGATTCTGCCTCATGTGACCTTTTCCTAACGTCtctttttgacctttttatgTTCTACTTCACCTGTCATAGTAACTGCTGTCCGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261704.1 True 806 mRNA 0.52 6 18797261 18798074

Neighbor

gene id symbol gene type direction distance location
rpz5 NA coding downstream 15166 18780999 ~ 18782095 (-)
LOC122360855 NA coding downstream 40864 18752790 ~ 18756397 (-)
LOC122360727 LOC107587797,LOC107714594,LOC107704906 coding downstream 134771 18653732 ~ 18662490 (-)
phf20l1 LOC107704904,LOC107587800,LOC107671837,LOC107724788 coding downstream 153972 18633238 ~ 18643289 (-)
tg tg,LOC107714614,LOC107672160,LOC107724770,LOC107552797,LOC107704832 coding downstream 164346 18601810 ~ 18632915 (-)
nr2f5 nr2f5,LOC107592459,LOC107592141,LOC107726692,LOC107671473,LOC103038004,LOC108433883,LOC108256176,LOC105891836,LOC105005680,LOC100380645 coding upstream 47670 18845744 ~ 18859744 (-)
bola1 bola1,LOC107592543,LOC107671409 coding upstream 83753 18881827 ~ 18883697 (-)
sv2a sv2a,LOC107592458,LOC107688240 coding upstream 86479 18884553 ~ 18916456 (-)
mtmr11 mtmr11,LOC107592457,LOC107688241,LOC107726680,LOC107671475,LOC107592143 coding upstream 130007 18928081 ~ 18950938 (-)
otud7b otud7b,LOC107726676 coding upstream 156255 18954329 ~ 18976693 (-)
G114259 LOC107666800,LOC107719142,LOC107592439 non-coding downstream 56432 18739754 ~ 18740829 (-)
LOC122360941 LOC107600493,LOC107719147,LOC107592185,LOC107685964,LOC107666785 non-coding downstream 108866 18687166 ~ 18688395 (-)
G114231 NA non-coding downstream 248322 18548188 ~ 18548939 (-)
LOC122360486 NA non-coding downstream 252581 18528871 ~ 18544680 (-)
G114075 NA non-coding downstream 421647 18373968 ~ 18375614 (-)
LOC122360016 apoa2,LOC107688286,LOC107728486 non-coding upstream 187329 18985403 ~ 18987926 (-)
G114399 NA non-coding upstream 194788 18992862 ~ 19063171 (-)
G114401 ntrk1,LOC107728446,LOC107592455,LOC107688245,LOC107671431,LOC107592146 non-coding upstream 214581 19012655 ~ 19041766 (-)
G114430 NA non-coding upstream 408045 19206119 ~ 19262830 (-)
G114458 NA non-coding upstream 482354 19280428 ~ 19283527 (-)
LOC122360940 fli1,LOC107692484,LOC107709558,LOC107656981 other downstream 98854 18684573 ~ 18698407 (-)
LOC122360747 plekha8,LOC107684546,LOC107745377,LOC107743161,LOC107596648,LOC107550836 other downstream 125987 18669607 ~ 18671274 (-)
G114236 LOC101883708,LOC105900568,LOC106574835 other downstream 146652 18649519 ~ 18650609 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other downstream 276974 18492626 ~ 18520287 (-)
slc45a4b slc45a4,LOC107704898,LOC107587808,LOC107741725,LOC107671711,LOC107552861,LOC107723109 other downstream 429988 18357417 ~ 18367273 (-)
rpz rpz,LOC107688232,LOC107728474,LOC107592467,LOC107671470,LOC107592140,LOC107726666,LOC107688233 other upstream 14164 18812238 ~ 18821110 (-)
cd22 LOC107728466,LOC107592448,LOC107666891,LOC107709614,LOC107686701 other upstream 618888 19416962 ~ 19421094 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other upstream 798358 19596432 ~ 19657724 (-)
G114715 NA other upstream 1368721 20166795 ~ 20177758 (-)
G114793 NA other upstream 1643891 20441965 ~ 20452450 (-)

Expression


Co-expression Network