G114259 (LOC107666800,LOC107719142,LOC107592439)


Basic Information

Item Value
gene id G114259
gene name LOC107666800,LOC107719142,LOC107592439
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 18739754 ~ 18740829 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU168682
AATACTGAAAATgcttacaaatatatttatatatttcccaAAAGTTTTTTGCCCTCTACATCGTGCAAAAAAACTTCATGACTCACGCCACCCCAGCGGCCATGATCAGAGAAAGTAAATTTTACTTATTCATATCAAAAGATCATGTGGCTTTGTAAAGATCCTCCAGTTCCCGAATAACAAATCAGTCTATTTTGTTCCCTACATCATTAAtttaaagtcaaatttaaaTGTCGCCGCGGTCGTAGTATCGGTTTCTCAGTGCCACAGATTGGTTTCATTGCGGGAACCAGAACACAATAACATGCGAGGAAATATCATACGGTATTATTCAAACACACCACGCAGAATACATCAGGTAACAACACTTGCACCTGTAGGCATGATTTGCTTGTATCTCATTCGGGCATGACATAGTTAGGCTAAACCATGCCTTTTTAGACACGACTGAGGGATCCATGCATGCATAAACTGCATACATGTGCCTCTTtcttggaaaaacaaaacaaataaaataataaaacaattgcaCACTCATGCAAAACACCAGCTGCAAGCTCACAGTGCACAATGCATCTTGGGTTCACCGAAACAACCCAGTCTGAGAAACATTTAGCAAGATCAAATACAGGAGCTCTGACAACAACGCATGACTGGTGCATGAAGGTGTATGAAGTGCGGGGAACACAATAAAGACACTTCCAGAAACCTGGAACATAGAAACagacaataaaagcaaacaGACAGGTGCAAAtacaataaagagaaaatatctGAATCAAATACAGTGCATATCAACACACAGAATACAGACACGAGCGTAAATCACAGATATGATATCAATCCTGACGTGTAGGCTGGACAGGTCGTACAGTACCTCCCACTCTTTAGCTGAAATGTCTACTGTTTGCTGCTCCTCGTTTGCCTCAGACTCCTCGATTTTCTTCACCACGATGAAGCCAGGATCACGGCTGATGCTTCCTACTCCATCCCCAAAAACATCTGGGCTCCACTGGATGAAGAAAACGTACAGGTGGTCTGac

Function

NR:

description
PREDICTED: oxidation resistance protein 1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168682 True 1043 lncRNA 0.41 2 18739754 18740829

Neighbor

gene id symbol gene type direction distance location
LOC122360727 LOC107587797,LOC107714594,LOC107704906 coding downstream 77264 18653732 ~ 18662490 (-)
phf20l1 LOC107704904,LOC107587800,LOC107671837,LOC107724788 coding downstream 96465 18633238 ~ 18643289 (-)
tg tg,LOC107714614,LOC107672160,LOC107724770,LOC107552797,LOC107704832 coding downstream 106839 18601810 ~ 18632915 (-)
ccn4b wisp1b,LOC107714595,LOC107587903,LOC107552812,LOC107704854,LOC107724778,LOC107672150 coding downstream 139490 18596956 ~ 18600264 (-)
ptp4a3b ptp4a3,LOC107587801,LOC107714615,LOC107552859,LOC107704902,LOC107724783,LOC107671807,LOC103029087,LOC108436585 coding downstream 150052 18566051 ~ 18589702 (-)
LOC122360855 NA coding upstream 11961 18752790 ~ 18756397 (-)
rpz5 NA coding upstream 40170 18780999 ~ 18782095 (-)
LOC122360857 NA coding upstream 56432 18797261 ~ 18798074 (-)
nr2f5 nr2f5,LOC107592459,LOC107592141,LOC107726692,LOC107671473,LOC103038004,LOC108433883,LOC108256176,LOC105891836,LOC105005680,LOC100380645 coding upstream 104915 18845744 ~ 18859744 (-)
bola1 bola1,LOC107592543,LOC107671409 coding upstream 140998 18881827 ~ 18883697 (-)
LOC122360941 LOC107600493,LOC107719147,LOC107592185,LOC107685964,LOC107666785 non-coding downstream 51359 18687166 ~ 18688395 (-)
G114231 NA non-coding downstream 190815 18548188 ~ 18548939 (-)
LOC122360486 NA non-coding downstream 195074 18528871 ~ 18544680 (-)
G114075 NA non-coding downstream 364140 18373968 ~ 18375614 (-)
LOC122360777 NA non-coding downstream 544586 18163340 ~ 18195168 (-)
LOC122360016 apoa2,LOC107688286,LOC107728486 non-coding upstream 244574 18985403 ~ 18987926 (-)
G114399 NA non-coding upstream 252033 18992862 ~ 19063171 (-)
G114401 ntrk1,LOC107728446,LOC107592455,LOC107688245,LOC107671431,LOC107592146 non-coding upstream 271826 19012655 ~ 19041766 (-)
G114430 NA non-coding upstream 465290 19206119 ~ 19262830 (-)
G114458 NA non-coding upstream 539599 19280428 ~ 19283527 (-)
LOC122360940 fli1,LOC107692484,LOC107709558,LOC107656981 other downstream 41347 18684573 ~ 18698407 (-)
LOC122360747 plekha8,LOC107684546,LOC107745377,LOC107743161,LOC107596648,LOC107550836 other downstream 68480 18669607 ~ 18671274 (-)
G114236 LOC101883708,LOC105900568,LOC106574835 other downstream 89145 18649519 ~ 18650609 (-)
mroh1 mroh1,LOC107741723,LOC107724794,LOC107671755,LOC107704831 other downstream 219467 18492626 ~ 18520287 (-)
slc45a4b slc45a4,LOC107704898,LOC107587808,LOC107741725,LOC107671711,LOC107552861,LOC107723109 other downstream 372481 18357417 ~ 18367273 (-)
rpz rpz,LOC107688232,LOC107728474,LOC107592467,LOC107671470,LOC107592140,LOC107726666,LOC107688233 other upstream 71409 18812238 ~ 18821110 (-)
cd22 LOC107728466,LOC107592448,LOC107666891,LOC107709614,LOC107686701 other upstream 676133 19416962 ~ 19421094 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other upstream 855603 19596432 ~ 19657724 (-)
G114715 NA other upstream 1425966 20166795 ~ 20177758 (-)
G114793 NA other upstream 1701136 20441965 ~ 20452450 (-)

Expression


Co-expression Network