CI01000001_01530818_01536092


Basic Information

Item Value
gene id CI01000001_01530818_01536092
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1529799 ~ 1536235 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_01530818_01536092.mRNA
ACATAAAAGTATGTTCACTGACTTATTTTGCATGTCCGCTTTCAATATTTGCATGATAAAATCAAATATTTCCATTGCGTGACTAACCAGTATTGTTTTAATAGACCTATTTTGCATGTGACAGAGGAAGGCATTTAAATCACATCATATGCAGGACCAAACATGAAATAATGAATCTAAAAACATAATTTGTATATACTGTATAATTATATGTAATTTATATATATTATAATTATTGATTTAATATGTAATTTTTGGATTTATTTATTATTTGCTGTACTGTGCCATAGAGTGACTAGACAGACAGACAGATCTCAACTCAACTGAAGATCTTTTTGATGACACAATGTTGTCAGATTTCCTTCCATAGACTGCCTTCACAACTGAAACTTTGACACTTCAAAAAGTTAATAAAGAGATCATAAAACAAATCCATATAAAGGCAGCTATGGAAGGAAACCTGACGGCATTTTGTCATCAAAAAGATCTTCATTTGTGTTCTGAAGATGAACAAAACTCTTATGTGTTTGAAATGACATGAGGGTGAGTAATTAATGACAGAATTTTCATTTTGGGGTGAACTAACCTTTTAAGGATTATGTTGGACCCTCTTAAGGACTTTTAGGGCAATCAAAGGGTAGGTAGGGTAATGATTATAAACTGAGTAAACGGATGGAGGGTGATATCACCCATAGTCATGATAAAGGAAGGGCTGACATTTCCAGTGAGCACAACTGGGGACAATAAACAATTGTTTTAGTGTCGAGCAAAGCTTGGAATTCCAGCAGCGACTATCGATCGCCTTTATCAATTTCGTTAAGGCATTCGATAGTGTCCACCTTGACTCGCTGTGGTGCATCGCCCGCGAATTCGGCATTCCTGAACGATTAGTCGATGTCTTTTGGAACCTCTACCACGAATCAAGCTGCTGTGTTCGGACCAAGGCGGGTAATACTGATTAATTCGCCACTGAGACTGGCGTATGGCAAGGATGTATTCTATCTCTGTTCCTATTTCTTATGGCGGTCAACTTCGTCATGCGCAGGGCAATGGACCGACACAAATTCGGAATCCCGTGGCGAGAGCTGGAATGGCTGATAGACCTTGACTCCGCTGATGACATCGCCCTGATCGGGGCGACGAAAAAGCACAACCCAAGAAATGACGGCGAGTTTGGAACGGGAGGCGGCCAAGATCGGGAATGCCTCAGCAGTCTTCCAAAGACTCAAGCTCATCTGGGCAGCCACGACGATCTCCATCAAGACCAAGGTTTGGAGAAAGATTTAAGAGACTCTCTCTTTGGGCAGCACATCGCGTCTGATGTTGTACTAGAGGCTGTAACATCGTTTATGACTGACAGCAAACCAAACAAACCGCTGGTCCTCTCTTTCCATGGGACTACAGGAGTTGGGAAAAATCATGTCGTTAAAATCATCGCAAGAAACATTTATACAAAAGGGGAAGGCAGCAATCATGTTCACATGTATATATCTCAGCATCATTTCCCACACAAAGAAAAGTCAGACTTGTACAGTGCACAGCTGAAGCAGTGGATTCATGAAAGTGTATCAAGTTTTCCCCGCTCCATGTTCATATTTGATGAAATGGACAAGATGAATCCACAGCTGATTGACACCATAAAACATTTTCTGAACAACAATGCCCGTGTAAACGGAGTGTCATTCCACAATGCAATCTTCATTTTTCTCAGTAATGCAGGTGGGAATGTGATTGCCAACTGGACTCTGGATTTCTGGAGAGAAGGCATATGTCGGGAAGAGCTATGGATGAACAGCAAGGAACTGGAGTCTAAAATCTCTCAAAACATCTTCAATGATAAAAACAGTGGATTTCTGCGCTCTATCATAAATCAGAATCTGATTGATCATTATATTCCTTTCCTACCTCTCATGTTGAAGCATGTGCGTCAGTGTGTCCTGGCTGAGATGGTCCATCTGAATATGAAGCGAGATGATGATCTGGCAGATAAAGTGGCCAGAGAAATGCCCTTCTTCCCTGAAAGAGAGAAGATCTTTTCAGTTAAAGGCTGCAAGTCTGTCAGACAGAAGTTGGTGCTGTATTGGTGAACAATTTAAGCAGCACTTGTTGTCCAATTTATGTTTTTAACTTTTAGACACATTTGAACAGCAATGAAGTATGACCTTACATGTCTCTTTTGTTTTAACTTATTAATATTTAAGTCTTGATGAGTTACATTGAAGTCTCTATA

Function

NR:

description
hypothetical protein cypCar_00018348

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_01530818_01536092.mRNA True 2230 mRNA 0.40 6 1529799 1536235

Neighbor

gene id symbol gene type direction distance location
CI01000001_01527865_01529016 NA coding upstream 704 1527676 ~ 1529095 (+)
CI01000001_01517517_01521698 NA coding upstream 7756 1517182 ~ 1522043 (+)
CI01000001_01511371_01514291 NA coding upstream 15112 1511371 ~ 1514687 (+)
CI01000001_01504275_01507238 NA coding upstream 22305 1504275 ~ 1507494 (+)
CI01000001_01357469_01365104 NA coding upstream 164223 1357267 ~ 1365576 (+)
CI01000001_01538233_01543680 NA coding downstream 1836 1538071 ~ 1543838 (+)
CI01000001_01545235_01551987 DNAJC16 coding downstream 9000 1545235 ~ 1552023 (+)
CI01000001_01589727_01595957 NA coding downstream 53492 1589727 ~ 1596289 (+)
CI01000001_01656726_01659321 MUL1B, MUL1 coding downstream 119822 1656057 ~ 1659430 (+)
CI01000001_01668334_01670035 CAMK2N1B coding downstream 131527 1667762 ~ 1671167 (+)
G13493 NA non-coding upstream 113147 1416412 ~ 1416652 (+)
G13492 NA non-coding upstream 118728 1410678 ~ 1411071 (+)
G13442 NA non-coding upstream 151776 1302726 ~ 1378023 (+)
G13435 NA non-coding upstream 241299 1286954 ~ 1288500 (+)
G13434 NA non-coding upstream 243069 1286317 ~ 1286730 (+)
G13448 NA non-coding downstream 24153 1560388 ~ 1565557 (+)
G13570 NA non-coding downstream 128030 1664265 ~ 1664492 (+)
G13574 NA non-coding downstream 146529 1682764 ~ 1683123 (+)
G13697 NA non-coding downstream 166749 1702984 ~ 1704437 (+)
G13051 NA other upstream 484647 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 1037742 483853 ~ 488825 (+)
G12614 NA other upstream 1218858 309144 ~ 310941 (+)
CI01000001_03618075_03620436 NA other downstream 2080013 3618075 ~ 3621451 (+)
G15794 NA other downstream 3524983 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 3750514 5279837 ~ 5287698 (+)
G15995 NA other downstream 4175650 5711885 ~ 5714951 (+)

Expression


Co-expression Network