G13435


Basic Information

Item Value
gene id G13435
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1286954 ~ 1288500 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU14960
TAAAATCAGAGACAATCCAACCATGTGGTCAAACACATTTTGGTGATTAGTAATCAATGACAGACCAAATGCCTCTCTTCTTTTAATCACCCAAGTCCCTCTTGTCATCTAAAGTGGTTCAGTTACATGATTTCTGCTGTTTTTTTAACCATTTCAGTCTTGTGACACTACTGATGGTGTGTCTCTCTTGTTCGGTGTGGACATTGGTAATAATGAGGGAAAGAAAAGTTTCAGTATTGATGAAAACATAATCACTCATCTTTCTGCTTGTCACTCCAAATCCACTCACGCAAACATACGACATCTCCTTTGTGTTTTTGATCAGGTACAATCCCAGAGAGAAGTCATGTGAATCCATCTAACTCATCGCCATCCTTTAAGTTTCACTGAAGAGATCTCAAAGTGAGATGCGCTTAAACACAGATAGAAAATATCTTAAATAATATAAAAATAGGTGTTTTGGATATAAATATGACAAAGATTTCAACCTAAATGAGGGCCATGGAAAAACATGACAGTGTTAAGAGTTTCTGAGGTACTTGCCATGTGGGTTCAAATAGTTCAATATCATTTTTCCAAGCATTTCCATTAGTCTAATGCTGAGGTCCATTATAGCCAGCCTGCTAAAAGAATAATGACTCATTGGAGCATAAAACATGTACGGCATACAGTTTGATCTACACATGACACCAATCGGTCATGTGACAAGCCAGGATCAAATTATTCACAATATTAGGCCAATCTGCCATTCGTGAATTATGACACTTCACATCAGCAAATCTAGTGTAAAAAATACTGACATTGTGAGAATGAAAATGAAATATTTACAAAGGTACTTCAACATTAATGCAACATTTGGCATAAAGAGTGTGCTGCGTGAGCCATAAAGTTTGTGCTAAATCTTACAGCAGCTGCTTTCTATGGCCAAATGGTTGATTGAACATTCACTTTCTAGACATTTTAATCCATAAACTGAGTTTGTTTCATTAAAAAATATTAATAAGCAAGAATCTATTAGTTGCTAATAAGTGGCAGACCTGTGTCACAATATGAAAGGCTTTTCAGGGAAACTGATGAAACGCAGCTGAAGGTTTTGAAGTGTGTGGTGAACTATACTTTGAAGAAATTTACTCGAAGTCAAGTCAGTGATTCTTACAATCTCACCCTCTCATTAAAACATCTTTTTTAATGAGCTGAAGTATAGAAAATGTCGATTTTGTTTATTGCAGCATTTGTTTGAAACGGCGCCAACCTGTGGTTGAGCTAATTATCTCCAGATCCAGATCTAAACCAAAACTTTAAGGGATAGTTCACTCACAAATGCAACTCCTGTCATTATTTACTCACCCTCATGTCATTACAAACCTGTATGCTGTGGAGAATTTTAAAAAATCTTATGCTCTTTCTTCACTTAAGTTATTACTTGATAGGACCATCAAATGTTAAGACATTTTTACACAAAACTTAATTCAAATGCACAATAACAACTAATATGCAATGAGTTACAATCAATCAGTCAATTAATCGATCAATTAACCAACCAACCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14960 True 1547 lncRNA 0.33 1 1286954 1288500

Neighbor

gene id symbol gene type direction distance location
CI01000001_01248946_01251200 NA coding upstream 34858 1248946 ~ 1252096 (+)
CI01000001_01209204_01212045 PFDN4 coding upstream 74702 1209204 ~ 1212252 (+)
CI01000001_01168378_01169553 NA coding upstream 117312 1167517 ~ 1169642 (+)
CI01000001_01088316_01091350 TSHZ2 coding upstream 195376 1088316 ~ 1091578 (+)
CI01000001_00483853_00488761 VWA1 coding upstream 798129 483853 ~ 488825 (+)
CI01000001_01357469_01365104 NA coding downstream 68767 1357267 ~ 1365576 (+)
CI01000001_01504275_01507238 NA coding downstream 215775 1504275 ~ 1507494 (+)
CI01000001_01511371_01514291 NA coding downstream 222871 1511371 ~ 1514687 (+)
CI01000001_01517517_01521698 NA coding downstream 228682 1517182 ~ 1522043 (+)
CI01000001_01527865_01529016 NA coding downstream 239176 1527676 ~ 1529095 (+)
G13434 NA non-coding upstream 224 1286317 ~ 1286730 (+)
G13191 NA non-coding upstream 81880 1204163 ~ 1205074 (+)
G13188 NA non-coding upstream 86162 1197856 ~ 1200792 (+)
G13190 NA non-coding upstream 90133 1193304 ~ 1196821 (+)
G13187 NA non-coding upstream 101227 1185452 ~ 1185727 (+)
G13442 NA non-coding downstream 14226 1302726 ~ 1378023 (+)
G13492 NA non-coding downstream 122178 1410678 ~ 1411071 (+)
G13493 NA non-coding downstream 127912 1416412 ~ 1416652 (+)
G13448 NA non-coding downstream 271888 1560388 ~ 1565557 (+)
G13570 NA non-coding downstream 375765 1664265 ~ 1664492 (+)
G13051 NA other upstream 241802 1043713 ~ 1045152 (+)
G12614 NA other upstream 976013 309144 ~ 310941 (+)
CI01000001_01668334_01670035 CAMK2N1B other downstream 379520 1667762 ~ 1671167 (+)
CI01000001_03618075_03620436 NA other downstream 2327748 3618075 ~ 3621451 (+)
G15794 NA other downstream 3772718 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 3998249 5279837 ~ 5287698 (+)
G15995 NA other downstream 4423385 5711885 ~ 5714951 (+)

Expression


Co-expression Network