LOC122323192 (LOC107557164,LOC107707879,LOC107730034,LOC107695200,LOC107671059)


Basic Information

Item Value
gene id LOC122323192
gene name LOC107557164,LOC107707879,LOC107730034,LOC107695200,LOC107671059
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 5584604 ~ 5588006 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216884.1
atgattcatatttttgtctcTGTATTTCATCTTTCCAGTGCAGCTGTTACTTCAAGCTGCAACCCACAGGGTGACTTTAATTTGCCAGTATTCGTGAGTAGTGGAGACTTCACAATAGGAGGAATTTTTCCTTTGCATTATAGAGTAGAGCTTCCTCCAACAGACTACATAAAGAAACCTTTAGCAGCACAGTGTCAAGGGTTTGATCCAAGGGCTTTCCGCTGGGCTCTCACTATGAGACTTGCTGTGGAGGaaataaacaacagaaaagaTCTTTTACCAAACCATACTCTGGCTTATAGCATCTTTGACTCTTGTGCCACTCCGGTGACTGCTCAGAAAGCAGTCCTAGCAGTGCTGAATGGAGAGGATGTTGTTCAAAGTTTAATATGTTCTGGAGCTAGCACTTTATTAGGATTAATAGGGGAATCTGGATCCTCACAGTCAATCGTTGTCTCCAGAACTCTGGAGCCTTTCAGAATAcccatgatAAGTTACTTCTCAACCTGCTCTTGTCTAAGTAATCGGAAGCAGTTCCCAACATTTTTCAGAGTGGTTCCCAATGACGATTACCAGGTCAAAGCTATCGCACAACTCTTAAAAAGGTTTGGCTGGACATGGATTGGTGTGGTGACTGAAGACCATGACTATGGCAGGTTTGCTTTACAAGGCCTAAAAAGAGAAATTGACAATACTAACATTTGTTTGGCCTATCATGAAATGATCCCTAAAGACTATACTCAGGAACGAGTCCTAAAGATTCTGAAAGTAATGAAAGAATCCACAGCTAAGGTGGTGGTTGTTTTTTCAGGAGAGGGAGAATTTTACCCTTTCTTAAGAGAGTTTGTCACTCAAAATATCACAGGAATTCAATGGATTGCAAGTGAGGCCTGGGTTACAGCTTCGATATTAGCAGAAACATATCCCTTCTTAGATGGCACAATTGGGTTTGCAATACGTCAAGGCCAGATCccaggtcttcaggattacCTCAAAACAGTGACCCCAGAAATGTACCCCTCTATTCCTCAAGTCCAGGAGTTGTGGGAGGCTCTCTATGCTTGTTCCCCCTCCACATCCAGCTTCAAAAGTCAGCTGCCCTCTTGCACAGGAAAGGAAACTCTCAGACAAGAACACTCTGCCTACATGAACACATCCAGCCCTCGTGTGACGTACAACGTGTATAAAGCAGTGTATGCTTTTGCTTATTCCCTACATAATCTGATTCACTGCAAACTTGGAAATGGACCATTTGAGAATTTCTCATGTGCAaatctgaaaaatgtgtttccatGGCAGCTTCAGCATTATTTACAGGaaatctctttctctgtttctggAGAAAGTGTAAATTTTGATGTTAAGGGAGATTCAATTCCATCGTATGATTTAATGAACTGGCAAAGACAGGCAAGTGGAGATATTCAGTTTGTTAAAGTAGGCCTCTATGATGGAGCTCAGCATTCCGGGAGAGAACTGTTGATTGAGGAGCAGGCCATTATGTGGTCTCACCAACAGAACAAGGTACCTGTGTCTGTATGCAGTAACAGCTGCACTCCAGGATTCAGGAAGGCTGTCCGTCGTGGGCAACCTCTGTGCTGCTTTGATTGTGTTCCATGTGATATTGGCAAGATCAGTAATCAGACAGattcaGTAGATTGTCTGTCATGCCCTGAAGATTATTGGTCCAATGTGAATGGAACGATATGTGTCCCGAAGGTGGTTGAGTTTCTCTCCCATGATGCAATGGGAATCACCCTGACTGTTATATCTGTTGTTGGAGCCTTTCTGACTATCACAGTGTTGGTGATATTTTTGTACAACAGAGGCACCCCGATAGTTCGTGTGAATAACTCAGAACTCAGTTTTTTCATCTTGTTATCACTGACTCTTTGTTTTCTGTGCGCTTTGGTGTTTATTGGGGAACCTACATCCTGGTCCTGCATGCTGCGACACACTGCTTTCAGCATCACTTTCTCGCTCTGCATCTCCTGCATCCTTGGCAAGACTTTAGTGGTGTTGGCGGCTTTTACAGCTACCCGACCTGGAAACAATATAATGAAATGGTTGGGTCCCACACAGCAGAGAATAATCATCTTTTGTTGCACTCTGGTCCAGGTGATCATATGCACTGCCTGGCTTGTAGCATCCCCTCCGTTCCCTTATAGAAACACTAAATATCAACAGTCCAAGATCATCCTGGATTGCAGCGTGGGCTCTGATCTGGCCTTCTGGTGTGTGCTGGGATATATAGGCCTTTTGGCCTGTGTCTGCTTTTTTCTGGCTTTTCTGGCCCGGAAGTTACCGGGCAATTTTAATGAGGCCAAATACATCACCTTCAGCATGCTTATATTTTGTGCAGTGTGGCTGGCATTTGTTCCTGCATATGTCAGTTCACCTGGTAAATTTACAACTGCTGTGGagatttttgctattttagcTTCTAGTTTTGGTCTTCTCTTCTGCTTGTTTACCcctaaatgttacattattttattaaagcctgagaagaacacaaagcaacatttaatgggaaaagttacaaaataa

Function

NR:

description
PREDICTED: extracellular calcium-sensing receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216884.1 True 2550 mRNA 0.43 6 5584604 5588006

Neighbor

gene id symbol gene type direction distance location
LOC122323002 si:ch211-229c8.4,v2rc1,v2rc2,LOC107742946,LOC107695205,LOC107568358,LOC107732718 coding upstream 12435 5567174 ~ 5572169 (+)
LOC122322998 si:ch73-125k17.2,LOC107564266,LOC107695204,LOC107742945 coding upstream 23693 5557451 ~ 5560911 (+)
LOC122322911 NA coding upstream 38182 5542929 ~ 5546422 (+)
LOC122362507 LOC107557173,LOC107741611 coding upstream 42718 5538835 ~ 5541886 (+)
LOC122362504 LOC107742935,LOC107564259,LOC107702176 coding upstream 47460 5533775 ~ 5537144 (+)
LOC122323193 LOC107730034,LOC107707879,LOC107557164,LOC107695200,LOC107671059 coding downstream 9903 5597909 ~ 5601061 (+)
LOC122323191 v2rx3,LOC107730035,LOC107695206,LOC108434083,LOC108263925 coding downstream 13435 5601441 ~ 5604997 (+)
LOC122323189 v2ra18,LOC107568349,LOC107695201,LOC107695208,LOC107716837,LOC107568268,LOC107568277,LOC107695207 coding downstream 19475 5607481 ~ 5610908 (+)
LOC122323190 v2ra17,LOC107695208,LOC107716837,LOC107568277,LOC107695207,LOC107568349,LOC107568268 coding downstream 37932 5625938 ~ 5629801 (+)
LOC122363134 v2ra16,LOC107716837,LOC107695208,LOC107568277,LOC107568268,LOC107568349,LOC107695207,LOC107695201 coding downstream 46788 5634794 ~ 5638273 (+)
G124595 NA non-coding upstream 229624 5354713 ~ 5354980 (+)
G124544 NA non-coding upstream 401067 5011405 ~ 5183537 (+)
G124547 NA non-coding upstream 526766 5056750 ~ 5057838 (+)
G124533 NA non-coding upstream 676435 4903768 ~ 4908169 (+)
G124506 NA non-coding upstream 827985 4756230 ~ 4756619 (+)
G124622 v2rx1,LOC107703364,LOC107568274,LOC107716020 non-coding downstream 71900 5659906 ~ 5660233 (+)
G124672 NA non-coding downstream 433235 6021241 ~ 6021636 (+)
G124673 NA non-coding downstream 435653 6023659 ~ 6023991 (+)
G124703 NA non-coding downstream 639475 6227481 ~ 6230584 (+)
LOC122362614 NA non-coding downstream 702516 6290522 ~ 6290901 (+)
LOC122363125 LOC107702192,LOC107742943,LOC107564270,LOC107557162,LOC107702193,LOC107742944,LOC107748627,LOC107671076,LOC107748628,LOC107564269,LOC107702194,LOC107671077,LOC107557163 other upstream 88811 5492237 ~ 5495793 (+)
G124598 NA other upstream 189292 5394895 ~ 5395312 (+)
G124580 NA other upstream 354658 5228563 ~ 5229946 (+)
G124577 NA other upstream 358547 5225808 ~ 5226057 (+)
G124553 NA other upstream 443933 5139490 ~ 5140671 (+)
LOC122323196 v2ra17,v2ra16,LOC107695207,LOC107568277,LOC107716837,LOC107695208,LOC107568268,LOC107568349 other downstream 31464 5619470 ~ 5624977 (+)
G124612 v2ra17,LOC107568349,LOC107568268,LOC107703349,LOC107695207,LOC107722082,LOC105904790,LOC107695201 other downstream 35447 5623453 ~ 5629653 (+)
G124661 NA other downstream 388204 5976210 ~ 5979282 (+)
LOC122362599 LOC107557170,LOC107748085,LOC107741383,LOC107569151,LOC107741381,LOC107697634,LOC107697635,LOC107568278,LOC107712093,LOC107671063,LOC107569152 other downstream 432543 6020549 ~ 6029121 (+)
G124707 NA other downstream 703485 6291491 ~ 6291925 (+)

Expression


Co-expression Network