fli1 (fli1,LOC107692484,LOC107656981)


Basic Information

Item Value
gene id fli1
gene name fli1,LOC107692484,LOC107656981
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 14704160 ~ 14727887 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264916.1
cacacactcacacgcacgcacgcacacacacacacacggcttcCTTCTCAAGCGCAGTGACTTCACTTCCCAaatttagaggaaaaaaaccATCCGGCGaaactgtctctgtctctccgCCACATATCGGGGGCTGGAATTAATTCAGACGCGTGTCATGTTTGGAATATTGTCGGGCTCCACTGAAAATTGCGCAAAATGGACGGAACTATCAAGGAGGCGCTGTCAGTGGTGAGTGAAGACCAGTCTCTGTTCGAGCCTCCGTACGCCGCTGCTGCTCCCTTACCCAAGACAGACATGACTGCGTCCGGCGCACAGGACTACGGTCAGCCTCACAAGATCAACCCTATCCCGCCTCAGCAGGAGTGGATCAACCCGCCCGGCCGGGTTAATGTCAAGCGAGAGTATGACCACATCAATGGATCCAGcaGAGAGTCCCCGGTGGACTGTAGTGTgggtaaatgcaataaaatggtAGGCGGGACCGACGCATCTCAGATGAGCTACACCAGCTACATGGACGAGAAGTGCGCTCCGCCCCCAAATATGACAACCAATGAGAGGAGAGTTATCGTCCCAGCAGacCCTTCTCTCTGGTCTCCAGACCATGTGCGGCAATGGTTAGACTGGGCCATTAAAGAGTATGGTCTTCAGGAGATCGACACGGCCATGTTCCACAACACAGATGGAAAAGAACTTTGCAAGATGAGCAAAGAAGACTTCCTGAGACTTACCAGCGTCTACAACACGGAGGTCCTGCTCTCACATCTCAATTACCTCAGGGAAAGCAGCTCATCAATATCATACAACACACCATCTCATACCGCGACCAATTCTCGCTTGGCTGCCAAAGATGaTGCGTCTTACGATGCTGTACGGAGGGCAGGCTGGTCAAACAACATGCACAGCGGCAAAGGCTCTCCTACGGTGGTGTCTCAGAACGTGTCCAAGAACACTGAACAGGCTCGGCCTCAGCCCGATCCTTACCAGATTCTAGGACCCACCAGCAGTCGACTCGCTAACCCAGGTTCGGGTCAGATCCAGCTGTGGCAGTTCCTGCTGGAGCTCCTCTCCGACAGCGCCAACGCCGGCTGCATCACCTGGGAAGGGACCAACGGGGAGTTCAAGATGACGGACCCCGACGAGGTGGCGCGCCGCTGGGGCGAGCGCAAGAGCAAGCCCAACATGAACTACGACAAGCTCAGCCGCGCCCTGCGCTACTACTACGACAAGAACATCATGACCAAAGTTCACGGCAAGCGCTACGCCTACAAGTTCGACTTCCACGGCATCGCCCAGGCCCTGCAGCCCCATCCCACCGAGTCCAGCATGTACAAATACCCCAGCGAACTGCCCTACGTGCCGAGCTACCACGCTCACCAGCAGAAGGTCAACTTCGTCTCGCCCCATCCCCCCTCCATGCCCGTCACGTCCTCCAACTTCTTCGGGCCCGCCGCCCAGTACTGGAGCTCTCCGACGGGAGGGCTTTATCCCAATCCCAGCGTGCCGCGTCACGCCAACTCACACGTGCCTTCCCACCTGGGCAGTTACTACTAAAACCCTTCGCCTTTCACCCCGCTGCCCGTACGCCGAAACTTGAACTGCACTCGACAAGAAGATAAATAAAAGCAAGCTGGAACCGGAGGGATTGTGGCCCGGAGAGTTAGCGCAACGTcgaaagaaagagaaagtagAGCAAAACGGACCAAAAAATGGAGTACTACTTATTGGAGGATGTTGGGTTggtgttttgtttcgtttcttgTGCCTTTCTACACCGATAAAGCCAATAAAGACCACCTACGTACAAGTCGGCGAACGACCGAGAAAATAATCACTGTAAACTCACCCTGTGTGTTTAATGCAATCGTGAACCCAGcgtttatatgtttttttggaCCTGGTCCCCGCTTCCCTTTGGATTTTATTGAAAGCCGCTTCGGTTACGCGAGTTTTATCTCCTCAAGTCGTGACTGAAACTCTCTTTTCTACGCAAATCTGGCAACTGGAAAACACGTTGGCATGATTGTTTATTAGGAGCTTCTCAGGCTAGCTGGCTCAAGCTAAACTCATCTATAGCACTCCTCTATGCTGATGGCGTTGACGCGAAGCCCGCTTTTTCGTTTCTGACGCACGGTGTCCCGTTTCGTTGGCCAGTGAGAATCCACTCGATTTCATCTCAAAGCAGCCGGAGTGTTGAGTCCACGCGAGATTTGCGTCTCGGACGGATGGACTGAACGAACGCGGGCATCGCGCGAAGTACCTCTTCGACCGTTGAAACAGCAGCACGAGACGTTGAAACCAGAGATTCGCGAACGCTGTGCGTTTGTCAGACCTATTTGCtagtaattttttttcgttttttttgatCAAAGGTCAACTAGGCATTAAAAGCATCTTACTGTATAAATTATGCAGAGCTATTTTCATATGTGACAGTGTTAAGAATCAAACGTTAATACGAGTTGACCTCGGTcaaaatgcaaacttttttttttttttttttttctttttaaatcagttaCTGAAGGTAGTTTTTACTACGTAGGTGTTTTGTATCTGTACATATGGGCAATAAGTTTATGaatgttttcttgtatttttcagaaaatgctttttctaaaGTTCTTGGTTGCATCGCCATGGCAATAAGAGGGTTATTTTGATACGTAGttgatatttttattcctttaaagcaaATGTCTTACCAAACTTGCTTAGAGACAATCTCTTCTACGTAAGTAATCGTTCCCAAAGTGCCAAAACAATGCCTTAAAGCCAAAACGTCCGGACAGTGTTATACAAGCGTCTGCCCTTGTGTGTAGCATTAGGAAAAAAGCTGATTGAAAATCCCCAGCTCCTCATCTCTTTAAGGGATCACTCTCAGATATGAAGGAATTGTGCTATTTTATACATGCAAGTATTTGgatattaaatttattactatataaatatatatgaaatattgcaattaaccttttttttcgTTAATTTTGTCGTTTCTGCAATTTATTAAGTATTACCTTTTGTAAAAGGGTCTGTTGTATAggtaaaatgtgacaaaataaatgtttttacattaaaaa

Function

symbol description
fli1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Acts upstream of or within angiogenesis and positive regulation of DNA-binding transcription factor activity. Predicted to be active in nucleus. Is expressed in several structures, including angioblastic mesenchymal cell; cardiovascular system; hematopoietic system; mesoderm; and pharyngeal arch. Human ortholog(s) of this gene implicated in blood platelet disease and thrombocytopenia. Orthologous to human FLI1 (Fli-1 proto-oncogene, ETS transcription factor).

NR:

description
PREDICTED: Friend leukemia integration 1 transcription factor isoform X2

GO:

id name namespace
GO:0001525 angiogenesis biological_process
GO:0051091 positive regulation of DNA-binding transcription factor activity biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09436 FLI1; friend leukemia integration 1 transcription factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264916.1 True 3086 mRNA 0.48 10 14704160 14727887

Neighbor

gene id symbol gene type direction distance location
smtla LOC107709547,LOC107590731,LOC107692520,LOC107656966 coding upstream 120906 14578170 ~ 14583254 (+)
barx2 barx2,LOC107670639,LOC107692488,LOC102779973 coding upstream 556973 14130499 ~ 14147187 (+)
rbm7 rbm7,LOC107755678,LOC107739154 coding upstream 577316 14123396 ~ 14126844 (+)
LOC122323172 LOC107560134,LOC107692493,LOC107733301,LOC107670597,LOC107717611,LOC107602107 coding upstream 830895 13870029 ~ 13873265 (+)
sertad3 sertad3,LOC107670600,LOC107717619 coding upstream 1106946 13594302 ~ 13597214 (+)
kcnj5 kcnj5,LOC107725067,LOC107558569,LOC107709561 coding downstream 24295 14752182 ~ 14775393 (+)
bmp16 LOC107566293,LOC107692530,LOC107709563,LOC107577119,LOC107725066 coding downstream 115324 14843211 ~ 14850376 (+)
ppp1r37 ppp1r37,LOC107692481,LOC107566290,LOC107709550 coding downstream 143881 14871768 ~ 14901407 (+)
shkbp1 shkbp1,LOC107692479,LOC107724139,LOC107656962 coding downstream 183157 14911044 ~ 14921023 (+)
si:ch211-136a13.1 LOC107727474,LOC107566284,LOC107692514,LOC107722278,LOC108264834,LOC108435511,LOC106580732 coding downstream 324157 15052044 ~ 15064838 (+)
G126285 NA non-coding upstream 233145 14470760 ~ 14471015 (+)
G126262 NA non-coding upstream 261657 14375565 ~ 14442503 (+)
G126251 NA non-coding upstream 583310 14120193 ~ 14120850 (+)
G126243 NA non-coding upstream 635289 14068604 ~ 14068871 (+)
G126192 NA non-coding upstream 754796 13948152 ~ 13949364 (+)
LOC122323060 NA non-coding downstream 12899 14740786 ~ 14743444 (+)
G126347 NA non-coding downstream 204434 14932321 ~ 14984748 (+)
G126345 ltbp4,LOC107724163,LOC107566282,LOC107692515 non-coding downstream 209038 14936925 ~ 14937634 (+)
G126458 NA non-coding downstream 338459 15066346 ~ 15066577 (+)
G126591 NA non-coding downstream 1033076 15760963 ~ 15820330 (+)
G126146 gramd1bb other upstream 762791 13940095 ~ 13941369 (+)
G126175 NA other upstream 791360 13909564 ~ 13912800 (+)
lbhl lbhl other upstream 834828 13861871 ~ 13869332 (+)
daw1 daw1,LOC107727686,LOC107576612,LOC107717604 other upstream 998046 13670289 ~ 13706114 (+)
gemin7 NA other downstream 98901 14826788 ~ 14828292 (+)
LOC122322993 LOC107709552 other downstream 178729 14906616 ~ 14910157 (+)
LOC122362588 NA other downstream 307496 15035383 ~ 15047893 (+)
LOC122362954 LOC107740354 other downstream 1223095 15950982 ~ 15953653 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other downstream 1319182 16047069 ~ 16055627 (+)

Expression


Co-expression Network