LOC122323172 (LOC107560134,LOC107692493,LOC107733301,LOC107670597,LOC107717611,LOC107602107)


Basic Information

Item Value
gene id LOC122323172
gene name LOC107560134,LOC107692493,LOC107733301,LOC107670597,LOC107717611,LOC107602107
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13870029 ~ 13873265 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216855.1
GCAAACGTCATCCTTCTCTCTTCCAGTTCCAAACGAGTCTTTTATTAcgctttttaaattgaaaaagttttaaagacCAACGACAGCTTCAGACGTGTAAGTGCTTACACAACAGCGCAAAGGAAAAGGCTTGGCACACAGCGCTTTGCAACCGTTTCCTGTGTATACCAGTCGCAAAAATAGATGAGCTGAATAATATCTGGTGAAGCAGATCGGCAAAACTTCTGAgagCTGAAATGGAAGAACGTGACttcaatttttcttttgaatataaTGACACCGACTGGTGTTTTGGCTCCGAAAACTGCACCGATATAGAGATCCCCACTGAACTGTCACCGTCGACGATAGGTCCCCGGCACTGGATTGCTCTGGTCTGCTATCTCATTGTGTTCCTGCTGGGCGTCCCGGGGAACGCTCTGGTGGTGTGGGTGACCGCGTTTCGAATGCCTAACTCTGTGAATGCGCAGTGGTTTCTGAATCTGGCCGTGGCGGACCTGCTGTGCTGCTTGTCGTTGCCTCTTCTCATGGTGCCGCTCGCCCAGGACCAGCACTGGCCTTACGGCGCTGCGGGTTGCAAGCTGCTCAGCGGTTTGCTCTACATGATGATGTACTGCAGCGTCCTGCTCCTGGTCGTGATCAGCTTGGACCGTCTGCTCCTGGTGACCAGACCGGTGTGGTGCCAGAACCACAGGAACACGAGGCAGGCCCGCTGCGTCTGTTTTGCCGTCTGGATTCTCGCTCTCCTGGCCAGTTCTCCTCAGTTTGCTCACATGGAGATACACGAACTGAGCGAGACCAAAACGTTGTGCGACGGCAAATACAACAACTTAGCTCATGCGTGGTCGGTAACTCTTACGCgctgttttctgtcttttctgcTGCCTTTCCTGATCATCTGCATCAGCCACTGGAAGGTTTACATCACGACGAGCTCTGGCCGAGGGCAAAGAGGCAGTGACAAGTCGGCCAGGACGGTACGTGTGATCCTGGCGGTGGTGCTCAGCTTCTTCCTCTGCTGGATTCCTCTGCACATAGTGGATATTCTGCTGCTGATCATGCACAAACAACCCCACAACGTCCTAGCCAACTTGCGACTAGCCCACGTGCTGACGCTCTGCTTAGCTTACATTAACAGCTGCCTGAACCCGCTGCTCTACGTATGTCTTGGCCGCGGATTTAAGAAAAATCTGATTAGCTCGTTGCGAAGTGTGCTTCATTTCGCATCCGAAGCACCGCATCATAGAACCAGCTTGACTGCAAACAGTAAGTCAACCACAGACGGGTTCAGAGAGAAGCCCTTATGAAGAAAATCTACTCTTCGAATACAAATACCACCCTCGGGAACCATTTGTAGGTTTAAAGAAGCATTCACGGATCACTAACGAACACGCTGCACAACAAAAATGCACACCAATACTGTTCTATGATATTAACAATAATCTTTTTAAACGTTCGTAACAttctcacaattaaaaaaaataattcataaccAGTTTCTATCAGCTAATCAAAAGCAGCTGTGCACAACTCcctatatttacatgcatttcaaTTTTCGCCTATTGCAGTTAATCCAGTTCGAATTCAGATTCTGGGAGTTTATGTGAACACTAAACGCTGCGGTCCGATTCACACAGAGTATTTGATTATATGCGAACAAAACTTTTAAGTTCACGAACCAGAGAATGTCACATTCACATTTTGTGaatctgttatatttttatattttagtgtaaaGAACAAGCACCGAATGCAGATATCACTTTCAGACAAAGGTTTGTtgtctgaaatgaaaaaagtcaCGTGACCAATTTAATACTGAGCAAAACATGGGGCAGCCAAAACTGAGGCGGCTGGCAAAAATAGTCAAATTTTAGCTTTTACACTTCTTTATTTTTCCGGTTGATTGATTGTCAGGTCTACTAAACCGATCTTCAATTAAACCGAGTTCAATCGAGTCGACTGGGGCCTTTCAGTCCGATTAGTTGCATGCTAATTCTGATGCGTTTGGTTCCTAATAGTTAGCATTCATGTAATTCAATGGATTAAAACGTTAAGCATTTACAGCcgatttacaaatatttttaaatattgtcgCATGTACATAGCTTTATTGTACGGTTACGCCATATACGGCATTTCTGTGTAGCGatttaccacagaaaataaatgtggttGTTTTGTAAATACGGACAAAAACGCCGAAGAATCGGTGAAGAATATCGGCTACCACTCCGaaatacatgttaaaaacataacaataagGCAAACTTGCATTAAGTTTCATGCATTACCATGTGGACAAACTGAACTTGCCAGgcgtgtttttaaaatgccgGCTCCTCGTGAGATTAACTAACCAGTAGAGGTCAGTAAAGAGCGAGTGTTAAACCTAAACTTGGCAGGTTAGTTGAGATTTCCAGCCATGAGATGTTGCTTTTGGTGCGTGTGGGTGAGTTTCGAGTATGGGTTAGCAACCTTTCTAACTGCACTACAAGGCAGCTAAATATAACAGCACTCCATGGCAACTGAAAACAATGCAGAAAGCTGAGCAGTGAACAGAAGTCATGTTTTAACCTCTCCTGCTCAACCAATTTGTGGATTGTACATTTTGTGTTACTGGAGCATTTGTAGCATCTTCTCATCAGAAGTCACCTGTAGATACAAGCAGATTTTTGACCATATTTTAACCTTTTCTGTATAATTAATCTTATTCTGTAttgataatgaaaatataaaataaagatataaaggtttaacctt

Function

NR:

description
PREDICTED: C5a anaphylatoxin chemotactic receptor 1-like

GO:

id name namespace
GO:0042789 mRNA transcription by RNA polymerase II biological_process
GO:0050679 positive regulation of epithelial cell proliferation biological_process
GO:0070374 positive regulation of ERK1 and ERK2 cascade biological_process
GO:0038178 complement component C5a signaling pathway biological_process
GO:0045177 apical part of cell cellular_component
GO:0016323 basolateral plasma membrane cellular_component
GO:0004878 complement component C5a receptor activity molecular_function

KEGG:

id description
K04010 C5AR1, CD88; C5a anaphylatoxin chemotactic receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216855.1 True 2766 mRNA 0.44 2 13870029 13873265

Neighbor

gene id symbol gene type direction distance location
sertad3 sertad3,LOC107670600,LOC107717619 coding upstream 272815 13594302 ~ 13597214 (+)
blvrb blvrb,LOC107692505 coding upstream 275880 13591816 ~ 13594149 (+)
mmp23bb mmp23bb,LOC107758054,LOC107670598,LOC107672246,LOC107717605,LOC107576217,LOC108440601 coding upstream 344723 13519067 ~ 13525306 (+)
ap2m1b ap2m1b,ap2m1a,LOC107672017,LOC107602122,LOC108440593,LOC107593770,LOC107671693,LOC108264350 coding upstream 355334 13501705 ~ 13514695 (+)
LOC122322886 dvl3,LOC107575491,LOC107758060,LOC107671937,LOC107717599,LOC107670590,LOC106612406 coding upstream 371029 13471097 ~ 13499000 (+)
rbm7 rbm7,LOC107755678,LOC107739154 coding downstream 250131 14123396 ~ 14126844 (+)
barx2 barx2,LOC107670639,LOC107692488,LOC102779973 coding downstream 257234 14130499 ~ 14147187 (+)
smtla LOC107709547,LOC107590731,LOC107692520,LOC107656966 coding downstream 704905 14578170 ~ 14583254 (+)
fli1 fli1,LOC107692484,LOC107656981 coding downstream 830895 14704160 ~ 14727887 (+)
kcnj5 kcnj5,LOC107725067,LOC107558569,LOC107709561 coding downstream 878917 14752182 ~ 14775393 (+)
G126139 NA non-coding upstream 29897 13809279 ~ 13840132 (+)
LOC122323141 NA non-coding upstream 176174 13612059 ~ 13693855 (+)
G126128 NA non-coding upstream 225269 13643398 ~ 13644760 (+)
G126098 NA non-coding upstream 326254 13543253 ~ 13543775 (+)
G125887 NA non-coding upstream 499248 13369713 ~ 13370781 (+)
G126178 NA non-coding downstream 42473 13915738 ~ 13917760 (+)
G126183 NA non-coding downstream 48581 13921846 ~ 13922131 (+)
G126184 NA non-coding downstream 48892 13922157 ~ 13922424 (+)
G126185 NA non-coding downstream 49570 13922835 ~ 13923229 (+)
G126186 NA non-coding downstream 52364 13925629 ~ 13925860 (+)
lbhl lbhl other upstream 697 13861871 ~ 13869332 (+)
daw1 daw1,LOC107727686,LOC107576612,LOC107717604 other upstream 163915 13670289 ~ 13706114 (+)
G126132 foxa3,LOC107717614,LOC107692498,LOC107602118,LOC107727696,LOC107575381,LOC107670595 other upstream 187458 13679045 ~ 13682571 (+)
rpl35a rpl35a,LOC107673417,LOC107670602 other upstream 439264 13427044 ~ 13430765 (+)
LOC122362547 LOC107672480,LOC107758042,LOC107554971 other upstream 647881 13216484 ~ 13222148 (+)
G126175 NA other downstream 36299 13909564 ~ 13912800 (+)
G126146 gramd1bb other downstream 66830 13940095 ~ 13941369 (+)
gemin7 NA other downstream 953523 14826788 ~ 14828292 (+)
LOC122322993 LOC107709552 other downstream 1033351 14906616 ~ 14910157 (+)
LOC122362588 NA other downstream 1162118 15035383 ~ 15047893 (+)

Expression


Co-expression Network