LOC122323141


Basic Information

Item Value
gene id LOC122323141
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13612059 ~ 13693855 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006246951.1
GCTCATTCTAAAGTATGGCGATGCAATTTGCTCGTAATAGAGACACAAATCGCAATTTCAAGACTTCCAGTTATCCTGCTTTCTAGATATTGTCCGGATTCTTGAGAGATGCATTTAGTACGCATTGCTGTCTGTGTGGATAAAAGTAACttctaaatgcatttctctCATTCTTGGTTTGTCAGAATTGAGTATTTCTACTCGGCACGTACGGCCGGCCTCGGGGGAGGAACACAAGATGGATCGGCTTCTCCTGAGGGTGTGTAAAGCCAAGGAGGAAATGCCTCCCTTTAAACAGGAAACTAGGATATTTACTGAGATTAAAATAACAACCGACGCCGAATCTGAGAGAAAACTAGTTAGTAGTTAGTAAGTCCAGTCAACAATGCGTGATTATCCTTTCTGTTTGACCTTTAATTTCcaaaccaataataataatataagtaataatagcaataaaataatatataataataataaaaagcttccCAGTAATTATTAAtcagtaaaatattgtaaattctATATTTTGCCACTAGTAAGGcttatttattagctttttagGAAATAACTGATATGTGGCCTATGCATTTGTAACAGTTTGTGTAGCACGATATCATTCATCTGATGTAATTTGTTACCCAGTTGTGCAATATTTGGCCCATCATTGCATTTCATGTAATTATATGTTAAATTAAGGCATTTGGACACTTAAGCCACAACTTGTAAATGTCTTTGCAATGCATTGGataacaaaatgtcaaaactaCTTTTcaagctaaataataaataataaaaaatgataaatatactCTGAATAAATGGTATTTAGATACACCGTTTGGAGGTGATGCACTAATTGGCTAGACTGTTTGATAGATGGCAAACAGCACCAGCGTGAGTCTGAACAACAGCTCGGTCCCGATGAGCGTGTGAGAGTCTGCGGCTTTCAGCGGCATCACAGCCTATCTATAGCGACATCAACAAGTCTCAACCCCGAGCCCCCGTCCCCCCGACCCGCTCCCCAGCGCAACGGTGTCCCATTAACACATCTGACTCCTGAAACCTGGCAGGAATGGCTCTGGTATCACACACGCGGACATTACTCCCATACTCGTGTTGGGAGGAGCTGGCTGAGGGGTATCGCTTCCACATCAAGTGTGCACCTGCAGTGTTTATCAAAACATATCAAACATCGCTGACAGAGTCACCCACGTTCTTCACAacgtcttcttttgtgttcggcagacGCGACGGTTCGGAACGGCTTTCATTGTTTCACTTTaaggtgaactatctctttaactCTCACTATATTCGGTCACATGCTGCTATCTTAACTATGGCATGTTGGGCCGTGAACTCCACACAGTACCGTGAGACTGATCTTATGACCAGAGCCGCAGCTGTTGCAACTGTGTAAGACTAATACagaaggcacacacacacacgcatgcctTCAGCATGACTGACAGCGCAAGAAAAACATTAAGATGCTCAGCTTATTCTCTGACTGACGGCTGCGGAGCGGGACATATGCAGTATTATTATGGTCTCTGTTCGGGAGGCGGTCAGCGATCTAATTGGATGAAGGCAGTGGGATGCCCCATATACAGAGGGAGGGAGAGCAGGAGCCCGTCTTACACGAATGCGACTCTGATGGCCCGACGAGGGCGACACGTGACCGCAGTGAAGTGAAGACTAACGTAAAAGAAGCTCTGGAGTCAGTTCATGATGCCAAAATATTGCGGCGAGaaacgaGGCAAAAAGGAGAGAAACCTGTACACCTATGACCACCCAAACACGGAAGTAACCAGGACACACCCGGAGTCATAAACCGTGGCGCGGGGCCAAACCTTTGCAgatacagaaacaaaacataaagCGCGATTCCTGGGTCGTCAGCGTGGGCCTGCTGATCTCAGTACGAGTGGGAGAGCAAGAAAGCAAGAGAACAAGGATCTGAACAGTTTGTTCACCCGGGTGAAGGCTAGAAGATCAAGcttGGTGTAGCAAGAGCTTGCCTGTGTTGCAATGTCCAGTCCCAGGGCTGAATTGTCCACCACAACCGCGGATGCTTTGAAGACGGCGTAGGCCGCGTAGCACAGCCAGATGTTGTTGGTGAGGCCCATGAGAAAGACACACCCCGCACCTACAGCAGAGAAAACCCCCAGCGAGAGCTCGCCCCACACGCCCCACCGCACTCTGATATAAC
>XR_006246952.1
GCTCATTCTAAAGTATGGCGATGCAATTTGCTCGTAATAGAGACACAAATCGCAATTTCAAGACTTCCAGTTATCCTGCTTTCTAGATATTGTCCGGATTCTTGAGAGATGCATTTAGTACGCATTGCTGTCTGTGTGGATAAAAGTAACttctaaatgcatttctctCATTCTTGGTTTGTCAGAATTGAGTATTTCTACTCGGCACGTACGGCCGGCCTCGGGGGAGGAACACAAGATGGATCGGCTTCTCCTGAGGGTGTGTAAAGCCAAGGAGGAAATGCCTCCCTTTAAACAGGAAACTAGGATATTTACTGAGATTAAAATAACAACCGACGCCGAATCTGAGAGAAAACTAGTTAGTAGTTAGTAAGTCCAGTCAACAATGCGTGATTATCCTTTCTGTTTGACCTTTAATTTCcaaaccaataataataatataagtaataatagcaataaaataatatataataataataaaaagcttccCAGTAATTATTAAtcagtaaaatattgtaaattctATATTTTGCCACTAGTAAGGcttatttattagctttttagGAAATAACTGATATGTGGCCTATGCATTTGTAACAGTTTGTGTAGCACGATATCATTCATCTGATGTAATTTGTTACCCAGTTGTGCAATATTTGGCCCATCATTGCATTTCATGTAATTATATGTTAAATTAAGGCATTTGGACACTTAAGCCACAACTTGTAAATGTCTTTGCAATGCATTGGataacaaaatgtcaaaactaCTTTTcaagctaaataataaataataaaaaatgataaatatactCTGAATAAATGGTATTTAGATACACCGTTTGGAGGTGATGCACTAATTGGCTAGACTGTTTGATAGATGGCAAACAGCACCAGCGTGAGTCTGAACAACAGCTCGGTCCCGATGAGCGTGTGAGAGTCTGCGGCTTTCAGCGGCATCACAGCCTATCTATAGCGACATCAACAAGTCTCAACCCCGAGCCCCCGTCCCCCCGACCCGCTCCCCAGCGCAACGGTGTCCCATTAACACATCTGACTCCTGAAACCTGGCAGGAATGGCTCTGGTATCACACACGCGGACATTACTCCCATACTCGTGTTGGGAGGAGCTGGCTGAGGGGTATCGCTTCCACATCAAGTGTGCACCTGCAGTGTTTATCAAAACATATCAAACATCGCTGACAGAGTCACCCACGTTCTTCACAacgtcttcttttgtgttcggcagacGCGACGGTTCGGAACGGCTTTCATTGTTTCACTTTaaggtgaactatctctttaactCTCACTATATTCGGTCACATGCTGCTATCTTAACTATGGCATGTTGGGCCGTGAACTCCACACAGTACCGTGAGACTGATCTTATGACCAGAGCCGCAGCTGTTGCAACTGTGTAAGACTAATACagaaggcacacacacacacgcatgcctTCAGCATGACTGACAGCGCAAGAAAAACATTAAGATGCTCAGCTTATTCTCTGACTGACGGCTGCGGAGCGGGACATATGCAGTATTATTATGGTCTCTGTTCGGGAGGCGGTCAGCGATCTAATTGGATGAAGGCAGTGGGATGCCCCATATACAGAGGGAGGGAGAGCAGGAGCCCGTCTTACACGAATGCGACTCTGATGGCCCGACGCAGAGGGCGACACGTGACCGCAGTGAAGTGAAGACTAACGTAAAAGAAGCTCTGGAGTCAGTTCATGATGCCAAAATATTGCGGCGAGaaacgaGGCAAAAAGGAGAGAAACCTGTACACCTATGACCACCCAAACACGGAAGTAACCAGGACACACCCGGAGTCATAAACCGTGGCGCGGGGCCAAACCTTTGCAgatacagaaacaaaacataaagCGCGATTCCTGGGTCGTCAGCGTGGGCCTGCTGATCTCAGTACGAGTGGGAGAGCAAGAAAGCAAGAGAACAAGGATCTGAACAGTTTGTTCACCCGGGTGAAGGCTAGAAGATCAAGcttGGTGTAGCAAGAGCTTGCCTGTGTTGCAATGTCCAGTCCCAGGGCTGAATTGTCCACCACAACCGCGGATGCTTTGAAGACGGCGTAGGCCGCGTAGCACAGCCAGATGTTGTTGGTGAGGCCCATGAGAAAGACACACCCCGCACCTACAGCAGAGAAAACCCCCAGCGAGAGCTCGCCCCACACGCCCCACCGCACTCTGATATAAC
>XR_006246953.1
CGTTACTTCATTATAGCTTTTCGTTTAGCTCTTCGGCACGTTCTGCTTATTCTCTGACTGACGGCTGCGGAGCGGGACATATGCAGTATTATTATGGTCTCTGTTCGGGAGGCGGTCAGCGATCTAATTGGATGAAGGCAGTGGGATGCCCCATATACAGAGGGAGGGAGAGCAGGAGCCCGTCTTACACGAATGCGACTCTGATGGCCCGACGAGGGCGACACGTGACCGCAGTGAAGTGAAGACTAACGTAAAAGAAGCTCTGGAGTCAGTTCATGATGCCAAAATATTGCGGCGAGaaacgaGGCAAAAAGGAGAGAAACCTGTACACCTATGACCACCCAAACACGGAAGTAACCAGGACACACCCGGAGTCATAAACCGTGGCGCGGGGCCAAACCTTTGCAgatacagaaacaaaacataaagCGCGATTCCTGGGTCGTCAGCGTGGGCCTGCTGATCTCAGTACGAGTGGGAGAGCAAGAAAGCAAGAGAACAAGGATCTGAACAGTTTGTTCACCCGGGTGAAGGCTAGAAGATCAAGcttGGTGTAGCAAGAGCTTGCCTGTGTTGCAATGTCCAGTCCCAGGGCTGAATTGTCCACCACAACCGCGGATGCTTTGAAGACGGCGTAGGCCGCGTAGCACAGCCAGATGTTGTTGGTGAGGCCCATGAGAAAGACACACCCCGCACCTACAGCAGAGAAAACCCCCAGCGAGAGCTCGCCCCACACGCCCCACCGCACTCTGATATAAC
>XR_006246954.1
GCTCATTCTAAAGTATGGCGATGCAATTTGCTCGTAATAGAGACACAAATCGCAATTTCAAGACTTCCAGTTATCCTGCTTTCTAGATATTGTCCGGATTCTTGAGAGATGCATTTAGTACGCATTGCTGTCTGTGTGGATAAAAGTAACttctaaatgcatttctctCATTCTTGGTTTGTCAGAATTGAGTATTTCTACTCGGCACGTACGGCCGGCCTCGGGGGAGGAACACAAGATGGATCGGCTTCTCCTGAGGGTGTGTAAAGCCAAGGAGGAAATGCCTCCCTTTAAACAGGAAACTAGGATATTTACTGAGATTAAAATAACAACCGACGCCGAATCTGAGAGAAAACTAGTTAGTAGTTAGTAAGTCCAGTCAACAATGCGTGATTATCCTTTCTGTTTGACCTTTAATTTCcaaaccaataataataatataagtaataatagcaataaaataatatataataataataaaaagcttccCAGTAATTATTAAtcagtaaaatattgtaaattctATATTTTGCCACTAGTAAGGcttatttattagctttttagGAAATAACTGATATGTGGCCTATGCATTTGTAACAGTTTGTGTAGCACGATATCATTCATCTGATGTAATTTGTTACCCAGTTGTGCAATATTTGGCCCATCATTGCATTTCATGTAATTATATGTTAAATTAAGGCATTTGGACACTTAAGCCACAACTTGTAAATGTCTTTGCAATGCATTGGataacaaaatgtcaaaactaCTTTTcaagctaaataataaataataaaaaatgataaatatactCTGAATAAATGGTATTTAGATACACCGTTTGGAGGTGATGCACTAATTGGCTAGACTGTTTGATAGATGGCAAACAGCACCAGCGTGAGTCTGAACAACAGCTCGGTCCCGATGAGCGTGTGAGAGTCTGCGGCTTTCAGCGGCATCACAGCCTATCTATAGCGACATCAACAAGTCTCAACCCCGAGCCCCCGTCCCCCCGACCCGCTCCCCAGCGCAACGGTGTCCCATTAACACATCTGACTCCTGAAACCTGGCAGGAATGGCTCTGGTATCACACACGCGGACATTACTCCCATACTCGTGTTGGGAGGAGCTGGCTGAGGGGTATCGCTTCCACATCAAGTGTGCACCTGCAGTGTTTATCAAAACATATCAAACATCGCTGACAGAGTCACCCACGTTCTTCACAacgtcttcttttgtgttcggcagacGCGACGGTTCGGAACGGCTTTCATTGTTTCACTTTaaggtgaactatctctttaactCTCACTATATTCGGTCACATGCTGCTATCTTAACTATGGCATGTTGGGCCGTGAACTCCACACAGTACCGTGAGACTGATCTTATGACCAGAGCCGCAGCTGTTGCAACTGTGTAAGACTAATACagaaggcacacacacacacgcatgcctTCAGCATGACTGACAGCGCAAGAAAAACATTAAGATGCTCAGCTTATTCTCTGACTGACGGCTGCGGAGCGGGACATATGCAGTATTATTATGGTCTCTGTTCGGGAGGCGGTCAGCGATCTAATTGGATGAAGGCAGTGGGATGCCCCATATACAGAGGGAGGGAGAGCAGGAGCCCGTCTTACACGAATGCGACTCTGATGGCCCGACGAGGGCGACACGTGACCGCAGTGAAGTGAAGACTAACGTAAAAGAAGCTCTGGAGTCAGTTCATGATGCCAAAATATTGCGGCGAGaaacgaGGCAAAAAGGAGAGAAACCTGTACACCTATGACCACCCAAACACGGAAGTAACCAGGACACACCCGGAGTCATAAACCGTGGCGCGGGGCCAAACCTTTGCAgatacagaaacaaaacataaagCGCGATTCCTGGGTCGTCAGCGTGGGCCTGCTGATCTCAGTACGAGTGGGAGAGCAAGAAAGCAAGAGAACAAGGATCTGAACAGTTTGTTCACCCGGGTGAAGGCTAGAAGATCAAGcttGGTGTAGCAAGAGCTTGCCTGTGTTGCAATGTCCAGTCCCAGGGCTGAATTGTCCACCACAACCGCGaaaaaaaaatacttggcTCACCTACAAGTGTGCAGACCGCCTCTACCACTCCATTATACACAGAGGATGTACTGGAGGGCTCAATGTGGTCCCACATCAGCTGGATGTAGTTAAAGACCTGTCCGTATCCAGCTGTGG
>XR_006246955.1
GCTCATTCTAAAGTATGGCGATGCAATTTGCTCGTAATAGAGACACAAATCGCAATTTCAAGACTTCCAGTTATCCTGCTTTCTAGATATTGTCCGGATTCTTGAGAGATGCATTTAGTACGCATTGCTGTCTGTGTGGATAAAAGTAACttctaaatgcatttctctCATTCTTGGTTTGTCAGAATTGAGTATTTCTACTCGGCACGTACGGCCGGCCTCGGGGGAGGAACACAAGATGGATCGGCTTCTCCTGAGGGTGTGTAAAGCCAAGGAGGAAATGCCTCCCTTTAAACAGGAAACTAGGATATTTACTGAGATTAAAATAACAACCGACGCCGAATCTGAGAGAAAACTAGTTAGTAGTTAGTAAGTCCAGTCAACAATGCGTGATTATCCTTTCTGTTTGACCTTTAATTTCcaaaccaataataataatataagtaataatagcaataaaataatatataataataataaaaagcttccCAGTAATTATTAAtcagtaaaatattgtaaattctATATTTTGCCACTAGTAAGGcttatttattagctttttagGAAATAACTGATATGTGGCCTATGCATTTGTAACAGTTTGTGTAGCACGATATCATTCATCTGATGTAATTTGTTACCCAGTTGTGCAATATTTGGCCCATCATTGCATTTCATGTAATTATATGTTAAATTAAGGCATTTGGACACTTAAGCCACAACTTGTAAATGTCTTTGCAATGCATTGGataacaaaatgtcaaaactaCTTTTcaagctaaataataaataataaaaaatgataaatatactCTGAATAAATGGTATTTAGATACACCGTTTGGAGGTGATGCACTAATTGGCTAGACTGTTTGATAGATGGCAAACAGCACCAGCGTGAGTCTGAACAACAGCTCGGTCCCGATGAGCGTGTGAGAGTCTGCGGCTTTCAGCGGCATCACAGCCTATCTATAGCGACATCAACAAGTCTCAACCCCGAGCCCCCGTCCCCCCGACCCGCTCCCCAGCGCAACGGTGTCCCATTAACACATCTGACTCCTGAAACCTGGCAGGAATGGCTCTGGTATCACACACGCGGACATTACTCCCATACTCGTGTTGGGAGGAGCTGGCTGAGGGGTATCGCTTCCACATCAAGTGTGCACCTGCAGTGTTTATCAAAACATATCAAACATCGCTGACAGAGTCACCCACGTTCTTCACAacgtcttcttttgtgttcggcagacGCGACGGTTCGGAACGGCTTTCATTGTTTCACTTTaaggtgaactatctctttaactCTCACTATATTCGGTCACATGCTGCTATCTTAACTATGGCATGTTGGGCCGTGAACTCCACACAGTACCGTGAGACTGATCTTATGACCAGAGCCGCAGCTGTTGCAACTGTGTAAGACTAATACagaaggcacacacacacacgcatgcctTCAGCATGACTGACAGCGCAAGAAAAACATTAAGATGCTCAGCTTATTCTCTGACTGACGGCTGCGGAGCGGGACATATGCAGTATTATTATGGTCTCTGTTCGGGAGGCGGTCAGCGATCTAATTGGATGAAGGCAGTGGGATGCCCCATATACAGAGGGAGGGAGAGCAGGAGCCCGTCTTACACGAATGCGACTCTGATGGCCCGACGaaacgaGGCAAAAAGGAGAGAAACCTGTACACCTATGACCACCCAAACACGGAAGTAACCAGGACACACCCGGAGTCATAAACCGTGGCGCGGGGCCAAACCTTTGCAgatacagaaacaaaacataaagCGCGATTCCTGGGTCGTCAGCGTGGGCCTGCTGATCTCAGTACGAGTGGGAGAGCAAGAAAGCAAGAGAACAAGGATCTGAACAGTTTGTTCACCCGGGTGAAGGCTAGAAGATCAAGcttGGTGTAGCAAGAGCTTGCCTGTGTTGCAATGTCCAGTCCCAGGGCTGAATTGTCCACCACAACCGCGGATGCTTTGAAGACGGCGTAGGCCGCGTAGCACAGCCAGATGTTGTTGGTGAGGCCCATGAGAAAGACACACCCCGCACCTACAGCAGAGAAAACCCCCAGCGAGAGCTCGCCCCACACGCCCCACCGCACTCTGATATAAC

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006246951.1 False 2215 lncRNA 0.45 7 13632076 13692558
XR_006246952.1 True 2218 lncRNA 0.45 7 13632076 13692558
XR_006246953.1 False 759 lncRNA 0.53 7 13612059 13692558
XR_006246954.1 False 2211 lncRNA 0.45 7 13632076 13693855
XR_006246955.1 False 2130 lncRNA 0.45 6 13632076 13692558

Neighbor

gene id symbol gene type direction distance location
sertad3 sertad3,LOC107670600,LOC107717619 coding upstream 14845 13594302 ~ 13597214 (+)
blvrb blvrb,LOC107692505 coding upstream 17910 13591816 ~ 13594149 (+)
mmp23bb mmp23bb,LOC107758054,LOC107670598,LOC107672246,LOC107717605,LOC107576217,LOC108440601 coding upstream 86753 13519067 ~ 13525306 (+)
ap2m1b ap2m1b,ap2m1a,LOC107672017,LOC107602122,LOC108440593,LOC107593770,LOC107671693,LOC108264350 coding upstream 97364 13501705 ~ 13514695 (+)
LOC122322886 dvl3,LOC107575491,LOC107758060,LOC107671937,LOC107717599,LOC107670590,LOC106612406 coding upstream 113059 13471097 ~ 13499000 (+)
LOC122323172 LOC107560134,LOC107692493,LOC107733301,LOC107670597,LOC107717611,LOC107602107 coding downstream 176174 13870029 ~ 13873265 (+)
rbm7 rbm7,LOC107755678,LOC107739154 coding downstream 429541 14123396 ~ 14126844 (+)
barx2 barx2,LOC107670639,LOC107692488,LOC102779973 coding downstream 436644 14130499 ~ 14147187 (+)
smtla LOC107709547,LOC107590731,LOC107692520,LOC107656966 coding downstream 884315 14578170 ~ 14583254 (+)
fli1 fli1,LOC107692484,LOC107656981 coding downstream 1010305 14704160 ~ 14727887 (+)
G126098 NA non-coding upstream 68284 13543253 ~ 13543775 (+)
G125887 NA non-coding upstream 241278 13369713 ~ 13370781 (+)
G125886 NA non-coding upstream 242548 13367416 ~ 13369511 (+)
G125881 wt1b,LOC107717629,LOC107670615,LOC107758040,LOC107602104,LOC107575657,LOC107673204 non-coding upstream 260329 13350491 ~ 13351730 (+)
G125879 NA non-coding upstream 265122 13346678 ~ 13346937 (+)
G126139 NA non-coding downstream 115424 13809279 ~ 13840132 (+)
G126143 NA non-coding downstream 139789 13833644 ~ 13887497 (+)
G126178 NA non-coding downstream 221883 13915738 ~ 13917760 (+)
G126183 NA non-coding downstream 227991 13921846 ~ 13922131 (+)
G126184 NA non-coding downstream 228302 13922157 ~ 13922424 (+)
rpl35a rpl35a,LOC107673417,LOC107670602 other upstream 181294 13427044 ~ 13430765 (+)
LOC122362547 LOC107672480,LOC107758042,LOC107554971 other upstream 389911 13216484 ~ 13222148 (+)
glb1l2 glb1l2,si:dkey-224e22.2,LOC107554970 other upstream 656114 12946841 ~ 12955945 (+)
napab napab,LOC107668964,LOC107758075,LOC107670630,LOC107714540,LOC107565089,LOC108413256 other upstream 686591 12917226 ~ 12925468 (+)
G125836 NA other upstream 727447 12880588 ~ 12884612 (+)
lbhl lbhl other downstream 168016 13861871 ~ 13869332 (+)
G126175 NA other downstream 215709 13909564 ~ 13912800 (+)
G126146 gramd1bb other downstream 246240 13940095 ~ 13941369 (+)
gemin7 NA other downstream 1132933 14826788 ~ 14828292 (+)
LOC122322993 LOC107709552 other downstream 1212761 14906616 ~ 14910157 (+)

Expression


Co-expression Network