CI01000001_04402985_04419845


Basic Information

Item Value
gene id CI01000001_04402985_04419845
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4402780 ~ 4419877 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_04402985_04419845.mRNA
AGCCTACAACTTCTTTTCTCTATAATTGAACGATGGCCAACAATAATGCGAATATACTGTACAGTCGAAATGATGACAAAATAGCCTGCGCGACAGAAAATGACGACGATGAGCAGAAAACCCCAGGCATCCCTTTGTCCAGAAAGCTGTGTTATGCCGTTGGAGGAATGCCTTATCAAATGACTGCAACCGCCAAGGGCTTTTTCATGCAGATCTTTTTACTGGACGTTGTGAAGATGGAAGCTTTCTCTGCATCCATCATCCTCTTCCTTGGTCGAGCTTGGGATGGCATTACGGATCCTCTGATTGGTTATGCTGTGAGCAAGAGTGGACGGACCAGAATTGGCAAACTTATTCCTTGGATTGTTTTCACAATGCCACTTGGGGTCCTATCGTATGTCATGCTCTGGTATACCCCACAGGACACCATGTCCTCTTCCTTCAGTTTCAGCTGGTACTTCATATGGTGCTGTCTGTTTGACACCTTCATGAGTTGCTACCATGTGCCGTATTCTTCCCTAAACATGTTTCTGGGGGGGAATGAGAAGGATCGAGACTCAGCCACTGGTTACAGGATGGGCATGGAAATGTTCGCTACACTGGCGGGGGCCGCCATTCAGGGTCAGATTGTGGGAGTGCACCATGCCAAAAAAACACGCGACTGCAGCTTACAGAATGACACGGTTGAGCCTTCTGGGAACCACACAGATGAAATATCTGTCACTCTACAAAACACAACAGCAGCCACAATATCCATCCCAGTGTGGCAGACGTTATTGGTCAAAATAGGCAAGAAGACTACTATATTCATTGGCCTTTTAATGTATATACCAGCTCTAATTGTGATATCCCTAGTGAAAAGTAATTTACCTGTCTTCATTATTATGTCCATGTTAGCTGGCACAAGTCTGGCATCCCTCTTTTTACTCCCTTGGTCAATGTTGCCAGATGTAGTAGATGACTTCAAAGTCAAGAACCCATCTTGCCAGGATATAGAACCACTATTCTACTCCTGTTATGTTTTCTTCAACAAATTCGGTGGAGGCATGTCTGTTGGAATCTCTACTTTGGTACTACACTTCGTAGGATATAAGCCTGGTGCTTGTAAACATAATCCAGAGGTCATACACTCGCTGCGGCTGCTCTTCGCTCCAGTGCCCATCTGCCTGTTGCTCATCAGCTTGGTGATTTTTTGCTTCTATCCCATCAATGAAGAGAGACGGCAGGAAATCCAGAATGCTTTAAGGAAAGCAGGGACAGAGACCAGCATGAAAGGAGAAGAAGAACTGAGCCTATGAAGTAATCACTCAGTATTCACTTAAGAAGTTCACTACTTTTGTAACATTTATGGGTTCTAAAACTGTTAATCATGAACATGTTTTGTTTTCCATCTCAGTGGAAAGGCTTTTCATTGTGCATGGTGAATGTTTCTCAATCCAGTTCTGGAGGGACCCCAACACAGTTTAGGAATCTCACTGATCTTACACACTCAAGATGAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_04402985_04419845.mRNA True 1503 mRNA 0.44 11 4402780 4419877

Neighbor

gene id symbol gene type direction distance location
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding downstream 2976 4392314 ~ 4399804 (-)
CI01000001_04378975_04384527 SDCBP2, SDCB1, SDCBP coding downstream 18194 4378885 ~ 4384586 (-)
CI01000001_04343042_04345953 NA coding downstream 56196 4342041 ~ 4346641 (-)
CI01000001_04334653_04338081 NA coding downstream 64011 4334163 ~ 4338769 (-)
CI01000001_04060101_04062122 NA coding downstream 339987 4059510 ~ 4062793 (-)
CI01000001_04465168_04466295 CDC42.L, CDC42L2, CDC42P6, CDC42 coding upstream 44935 4463257 ~ 4466918 (-)
CI01000001_04468566_04523431 DNMT3BB.1 coding upstream 48332 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF coding upstream 306527 4725927 ~ 4728210 (-)
CI01000001_04732844_04744038 NA coding upstream 312967 4732844 ~ 4744038 (-)
CI01000001_04746153_04754209 NA coding upstream 326256 4746133 ~ 4754209 (-)
G15609 NA non-coding downstream 49453 4353081 ~ 4353327 (-)
G15608 NA non-coding downstream 50925 4349922 ~ 4351855 (-)
G15605 NA non-coding downstream 61562 4339284 ~ 4341218 (-)
G15529 NA non-coding downstream 91179 4299568 ~ 4311601 (-)
G15625 NA non-coding upstream 28988 4448865 ~ 4449419 (-)
G15539 NA non-coding upstream 30332 4450209 ~ 4450461 (-)
G15546 NA non-coding upstream 36320 4456197 ~ 4458758 (-)
G15544 NA non-coding upstream 41098 4460975 ~ 4461433 (-)
G15537 NA non-coding upstream 41780 4461657 ~ 4461912 (-)
CI01000001_02258523_02262621 NA other downstream 2105568 2258442 ~ 2263103 (-)
G14228 NA other downstream 2346302 2055974 ~ 2056478 (-)
G14219 NA other downstream 2407882 1994210 ~ 1994898 (-)
G14104 NA other downstream 2635322 1763669 ~ 1771468 (-)
G15736 NA other upstream 381024 4800901 ~ 4801395 (-)
G16332 NA other upstream 530812 4950689 ~ 4957842 (-)
G16462 NA other upstream 802900 5222777 ~ 5229585 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location